HHsearch alignment for GI: 254781091 and conserved domain: PRK06460
>PRK06460 hypothetical protein; Provisional.
Probab=99.68 E-value=2.7e-15 Score=112.42 Aligned_cols=293 Identities=18% Similarity=0.100 Sum_probs=159.1
Q ss_pred HHHHHHHHHHHHHHHCCCCHHHEEEECCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCC----CCCCCCCCC
Q ss_conf 9999999999999972989778988668538764455654421022456645873332122111222----222222222
Q gi|254781091|r 43 TRLYIEESRRIIADFCGAKPDHVVFTSSATEAANWVLTPHFYQGSHKISIDSLYISAIEHPAVYAGG----HFPSHKIHK 118 (383)
Q Consensus 43 ~~~~~e~aR~~ia~~~g~~~~ei~ft~~~T~a~~~~i~~~~~~~~~~~~~~~ii~s~~eH~s~~~~~----~~~~~~v~~ 118 (383)
T Consensus 46 T~~~le~---~la~LEg~~~a-~~~~SG-maAi~~~l~~~l~------~Gdhiv~~~~~Yg~t~~l~~~~l~~~Gv~v~~ 114 (375)
T PRK06460 46 TVLKLAE---KIAELEEAEMG-VAFSSG-MGAISTTLLTLLK------PGSSVLIHRDMFGRSYRFFTDFLRNWGVKVEV 114 (375)
T ss_pred HHHHHHH---HHHHHHCCCEE-EEECCH-HHHHHHHHHHHHC------CCCEEEECCCCCCCHHHHHHHHHHHCCEEEEE
T ss_conf 7999999---99998199808-995359-9999999999728------99989971787586799999998737867797
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCE
Q ss_conf 22222221110234553244311356532654034344433321123565203446533444323365544444334310
Q gi|254781091|r 119 IPVLSKGIVDIQALTDFLEQRNSTCGIPMIAVMFVNNETGVIQPIKEIAQIVKEYQGILVVDAVQAAGRIPLSIEEIKAD 198 (383)
Q Consensus 119 v~~~~~g~i~~~~l~~~i~~~t~~~~~~LVs~~~~~n~tG~i~pi~~I~~~~~~~g~~~~vD~aqa~g~~~id~~~~~~D 198 (383)
T Consensus 115 ~d~~-----~~~~~~~~~~~~Tk-----lv~~EspsNP~l~v~Di~~i~~ia~~~gi~~vVDNT~atP~~-~~Pl~~GaD 183 (375)
T PRK06460 115 ARPG-----EENILEKIKNKRYD-----VVFVETISNPLLRVIDIPELSKACKENGALLIVDSTFATPIN-QKPLVQGAD 183 (375)
T ss_pred ECCC-----CHHHHHHHCCCCCE-----EEEEECCCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCCC-CCHHHHCCC
T ss_conf 3899-----99999973476760-----899988999876405858999999874993897567414122-881451798
Q ss_pred EEEECCCCCCCCCC---CHHHHCCCCCCCCC---CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHH
Q ss_conf 68730543322343---20110145742012---2122477421222222211222100122110010024565321012
Q gi|254781091|r 199 FLIISSHKLGAPVG---AGALVFREDILLPS---PLLRGGDQEKGQRAGTENYAVIGGFAVAAQQMVKDIQKRSSRVFAI 272 (383)
Q Consensus 199 ~~~~S~hK~~GP~G---~G~L~~r~~~~~~~---p~~~Gg~~e~~~~~GT~~~~~i~~~~~al~~~~~~~~~~~~~~~~L 272 (383)
T Consensus 184 ivvhS~TKyi~GhsD~l~Gvv~~~~~~~~~l~~~~~~~G~---------~lsP~~a~l~~rGl~----TL~lR~~~~~~n 250 (375)
T PRK06460 184 IVIHSASKFIAGHNDVIAGLAAGSYELMKKIDLMRRTLGT---------SLDPHAAYLTIRGIK----TLKIRMDVINSN 250 (375)
T ss_pred EEEEECCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCC---------CCCHHHHHHHHCCCC----CHHHHHHHHHHH
T ss_conf 8999556434678873403424819999999999864278---------788166888863699----899999999999
Q ss_pred HHHHHHHHHHHHHCCC-CCCCC-C------------CCCCCEEEEEECCCCHHHHH---HHHHHCCCEEEECHHHC---C
Q ss_conf 3333444443210001-22322-1------------10365228985799999999---99875896998711338---8
Q gi|254781091|r 273 RDYLEQELKKLIPNII-IYGKD-A------------ERISNTCCFSIPFLKAEVLQ---IALDLEGIAVSAGSACS---S 332 (383)
Q Consensus 273 ~~~l~~~l~~~~~~~~-i~~~~-~------------~~~~~i~~~~~~~~~~~~v~---~~l~~~gI~v~~G~~C~---~ 332 (383)
T Consensus 251 A~~lA~~L~~h-p~V~~V~yPgl~s~p~h~lakk~~~g~ggl~sf~l~~-~~~~~~~f~~~L~lf~~a~SlGg~eSLi~~ 328 (375)
T PRK06460 251 AQKIAEFLQEH-PKVSKVYYPGLKSHPDYGIARRVLKGYGGVVSFEIKG-SQNDALKLMKRLSVILPAQTLGGVNSTISH 328 (375)
T ss_pred HHHHHHHHHHC-CCCCEEECCCCCCCCCHHHHHHHCCCCCCEEEEEECC-CHHHHHHHHHHCCCCEECCCCCCCCCEEEC
T ss_conf 99999999748-9817798989999947999998569997426999708-999999999828826343167876301127
Q ss_pred CCCCCC-----HHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHH
Q ss_conf 643310-----146762888747659999078889999999999999
Q gi|254781091|r 333 GKIKKN-----HVLAAMGFDTSQGAVRVSCGDSTTQEDIDIFLNALQ 374 (383)
Q Consensus 333 ~~~~~~-----~vl~~~g~~~~~g~vRiS~~~~nT~~dId~l~~~L~ 374 (383)
T Consensus 329 p~~~sh~~~~~e~~~~~Gi~--~~liRlSvGlEd~eDLi~DL~~AL~ 373 (375)
T PRK06460 329 PATMSHRTLTPEERKILGIT--DSMLRLSVGIEDVEDLIEDLDRALS 373 (375)
T ss_pred CCCCCCCCCCHHHHHHCCCC--CCEEEEEECCCCHHHHHHHHHHHHH
T ss_conf 54245531899999965979--3969999421999999999999983