HHsearch alignment for GI: 254781091 and conserved domain: PRK06541
>PRK06541 hypothetical protein; Provisional.
Probab=99.69 E-value=2e-14 Score=107.06 Aligned_cols=341 Identities=18% Similarity=0.174 Sum_probs=180.6
Q ss_pred CEECCCCCC------CCCCHHHHHHHHHHHHHCC---CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEECCHHHH
Q ss_conf 001215788------8989899999999996428---8523658999999999999999999729897789886685387
Q gi|254781091|r 4 RVYLDWNAT------APLLEVVRQSFVKSLDFYG---NPSSVHKEGQKTRLYIEESRRIIADFCGAKPDHVVFTSSATEA 74 (383)
Q Consensus 4 ~iYlD~aat------tp~~~~v~~a~~~~~~~~~---n~~s~h~~~~~~~~~~e~aR~~ia~~~g~~~~ei~ft~~~T~a 74 (383)
T Consensus 52 ~~ylD~~~g~~~~~lGH~hp~v~~Ai~~Q~~~l~~~~~~~~~~~~------~~~l-ae~L~~~~p~~l~~v~f~~SGsEA 124 (460)
T PRK06541 52 KRYLDGLAGLFVVQVGHGRAELAEAAAEQAGTLAFFPLWSYAHPP------AIEL-AERLAALAPGDLNRVFFTTGGSEA 124 (460)
T ss_pred CEEEECCCCHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHH------HHHH-HHHHHHHCCCCCCEEEEECCHHHH
T ss_conf 999996514875311789899999999999757875677557879------9999-999997488886989970874899
Q ss_pred HHHHHHHH-HHHCCCCCCCC-EEEECCCC-CCCCCCCCCCCCC------------CCCCCCCCC------C-------CC
Q ss_conf 64455654-42102245664-58733321-2211122222222------------222222222------2-------21
Q gi|254781091|r 75 ANWVLTPH-FYQGSHKISID-SLYISAIE-HPAVYAGGHFPSH------------KIHKIPVLS------K-------GI 126 (383)
Q Consensus 75 ~~~~i~~~-~~~~~~~~~~~-~ii~s~~e-H~s~~~~~~~~~~------------~v~~v~~~~------~-------g~ 126 (383)
T Consensus 125 ~E~AiklAr~y~~~~G~~~r~~iis~~~~yHG~t~ga~s~tg~~~~~~~~~p~~~g~~~vp~~~~~~~~~~~~~~~~~~~ 204 (460)
T PRK06541 125 VESAWKLAKQYFKLTGKPGKHKVISRAIAYHGTTQGALAITGLPAFKAPFEPLTPGGFRVPNTNFYRAPEHGDDPEAFGR 204 (460)
T ss_pred HHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHCCCHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCHHHHHH
T ss_conf 99999999999996199986189996687167865788751880003788788999167688864457767899889999
Q ss_pred CCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCC----HHHHHHHHCCCCCCCCCCCCCC-CCCC--CCCCC--CCCC
Q ss_conf 110234553244311356532654034344433321----1235652034465334443233-6554--44443--3431
Q gi|254781091|r 127 VDIQALTDFLEQRNSTCGIPMIAVMFVNNETGVIQP----IKEIAQIVKEYQGILVVDAVQA-AGRI--PLSIE--EIKA 197 (383)
Q Consensus 127 i~~~~l~~~i~~~t~~~~~~LVs~~~~~n~tG~i~p----i~~I~~~~~~~g~~~~vD~aqa-~g~~--~id~~--~~~~ 197 (383)
T Consensus 205 ~~~~~~~~~i~~~~~-~~iAavI~EPi~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEVqtGfGRtG~~fa~e~~gv~P 283 (460)
T PRK06541 205 WAADRIEEAIEFEGP-DTVAAVFLEPVQNAGGCFPPPPGYFERVREICDRYDVLLVSDEVICAFGRLGEMFGCERFGYVP 283 (460)
T ss_pred HHHHHHHHHHHHCCC-CCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEECCCCEECCCCCCCCCHHCCCCCCC
T ss_conf 999999999985199-8578998457778788656868999999997464795376675120786533732201689489
Q ss_pred EEEEECCCC-CCCCC-CCHHHHCCCCCCCCCCCCCCCCC-CCC-CCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHH
Q ss_conf 068730543-32234-32011014574201221224774-212-222222112221001221100100245653210123
Q gi|254781091|r 198 DFLIISSHK-LGAPV-GAGALVFREDILLPSPLLRGGDQ-EKG-QRAGTENYAVIGGFAVAAQQMVKDIQKRSSRVFAIR 273 (383)
Q Consensus 198 D~~~~S~hK-~~GP~-G~G~L~~r~~~~~~~p~~~Gg~~-e~~-~~~GT~~~~~i~~~~~al~~~~~~~~~~~~~~~~L~ 273 (383)
T Consensus 284 Div~~g--Kglg~G~~Pl~av~~~~~i~~~--~~~~~~~~~hg~T~~g--npla~aaa~avL~~i~~--~~l~~~v~~~G 355 (460)
T PRK06541 284 DIITCA--KGITSGYSPLGAMIASDRLVEP--FLDGKTMFLHGYTFGG--HPVSAAVALANLDIFER--EGLLDHVRDNE 355 (460)
T ss_pred CHHHHH--HHCCCCCCCCEEEECCHHHHHH--HCCCCCCCCCCCCCCC--CHHHHHHHHHHHHHHHH--CCHHHHHHHHH
T ss_conf 514122--3125887770467403999876--5268853135767888--98999999999999986--57999999999
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEC----------CCCHH-----HHHHHHHHCCCEEEECHHHCCCCCCCC
Q ss_conf 333444443210001223221103652289857----------99999-----999998758969987113388643310
Q gi|254781091|r 274 DYLEQELKKLIPNIIIYGKDAERISNTCCFSIP----------FLKAE-----VLQIALDLEGIAVSAGSACSSGKIKKN 338 (383)
Q Consensus 274 ~~l~~~l~~~~~~~~i~~~~~~~~~~i~~~~~~----------~~~~~-----~v~~~l~~~gI~v~~G~~C~~~~~~~~ 338 (383)
T Consensus 356 ~~l~~~L~~l~-~~p~v~d-VRG~GL~~giElv~d~~~~~~~~~~~~~~~~~~~l~~~~~~~Gl~~~~~~---------- 423 (460)
T PRK06541 356 PAFRATLEKLL-DLPIVGD-VRGDGYFYGIELVKDKATKETFTDDESERLLRGFLSPALFEAGLYCRADD---------- 423 (460)
T ss_pred HHHHHHHHHHH-CCCCEEE-EECCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEECC----------
T ss_conf 99999999974-6997787-41077389999545765456676467789999999999997895997458----------
Q ss_pred HHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 1467628887476599990788899999999999999998623
Q gi|254781091|r 339 HVLAAMGFDTSQGAVRVSCGDSTTQEDIDIFLNALQKIIRTST 381 (383)
Q Consensus 339 ~vl~~~g~~~~~g~vRiS~~~~nT~~dId~l~~~L~~iv~~~~ 381 (383)
T Consensus 424 ---------~~~~virl~PPL~it~~eid~~l~~l~~aL~e~~ 457 (460)
T PRK06541 424 ---------RGDPVVQLAPPLISGQEEFDEIEAILRSVLTEAW 457 (460)
T ss_pred ---------CCCCEEEEECCEECCHHHHHHHHHHHHHHHHHHH
T ss_conf ---------9998899978933789999999999999999999