HHsearch alignment for GI: 254781091 and conserved domain: PRK07550
>PRK07550 hypothetical protein; Provisional.
Probab=99.88 E-value=7.4e-21 Score=146.06 Aligned_cols=317 Identities=15% Similarity=0.150 Sum_probs=194.4
Q ss_pred CCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHC----C--CCHHHEEEECCHHHHHHHHHHHHHHHCC
Q ss_conf 989899999999996428852365899999999999999999972----9--8977898866853876445565442102
Q gi|254781091|r 14 PLLEVVRQSFVKSLDFYGNPSSVHKEGQKTRLYIEESRRIIADFC----G--AKPDHVVFTSSATEAANWVLTPHFYQGS 87 (383)
Q Consensus 14 p~~~~v~~a~~~~~~~~~n~~s~h~~~~~~~~~~e~aR~~ia~~~----g--~~~~ei~ft~~~T~a~~~~i~~~~~~~~ 87 (383)
T Consensus 43 ~~p~~i~~a~~~a~~~~~~~--~Y~~~~G----~~~LR~aia~~~~~~~g~~~~pe~I~it~G~~~al~~~~~al~~--- 113 (387)
T PRK07550 43 PPPPELRRALAEAAGDPAAH--LYGPVEG----LPELREAYAAQYSRLYGAAINPGQVAITSGCNQAFWAAMVTLAG--- 113 (387)
T ss_pred CCCHHHHHHHHHHHCCCCCC--CCCCCCC----CHHHHHHHHHHHHHHHCCCCCHHHEEECCCHHHHHHHHHHHHCC---
T ss_conf 87899999999996698888--8989857----19999999999999868899679889876789999999999718---
Q ss_pred CCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCC-C-CCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCC---
Q ss_conf 245664587333212211122222222222222222-2-21110234553244311356532654034344433321---
Q gi|254781091|r 88 HKISIDSLYISAIEHPAVYAGGHFPSHKIHKIPVLS-K-GIVDIQALTDFLEQRNSTCGIPMIAVMFVNNETGVIQP--- 162 (383)
Q Consensus 88 ~~~~~~~ii~s~~eH~s~~~~~~~~~~~v~~v~~~~-~-g~i~~~~l~~~i~~~t~~~~~~LVs~~~~~n~tG~i~p--- 162 (383)
T Consensus 114 ---pGD~Vli~~P~Y~~y~~~~~~~G~~~~~vp~~~~~~~~~d~~~le~~~~~~tk-----~iil~~P~NPtG~v~s~e~ 185 (387)
T PRK07550 114 ---AGDEVILPTPWYFNHKMWLDMLGIRAVLVPLDTGPGLLPDPEAAAALITPRTR-----AIVLVTPNNPTGVVYPPEL 185 (387)
T ss_pred ---CCCEEEEECCCCCCHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHCCCCCC-----EEECCCCCCCCCCCCCHHH
T ss_conf ---98989982796753799999769989734777567987799999975565783-----7703899699885107798
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCC----CCCCCCC---CCCC-CEEEEECCCCCCCCCC--CHHHHCCCCCCCCC-CCCCC
Q ss_conf 12356520344653344432336----5544444---3343-1068730543322343--20110145742012-21224
Q gi|254781091|r 163 IKEIAQIVKEYQGILVVDAVQAA----GRIPLSI---EEIK-ADFLIISSHKLGAPVG--AGALVFREDILLPS-PLLRG 231 (383)
Q Consensus 163 i~~I~~~~~~~g~~~~vD~aqa~----g~~~id~---~~~~-~D~~~~S~hK~~GP~G--~G~L~~r~~~~~~~-p~~~G 231 (383)
T Consensus 186 l~~l~~la~~~~~~iI~DEiY~~~~~~~~~~~~~~~~~~~~~~vI~i~S~SK~~~~~G~RiG~i~~~~~~i~~~~~~~~- 264 (387)
T PRK07550 186 LHELYDLARRRGLALILDETYRDFDSRGGAPHDLFADPDWGDTLVHLYSFSKAYRLTGHRVGALAASPARLAEIEKFLD- 264 (387)
T ss_pred HHHHHHHCCCEEEEEEECCCHHHHHCCCCCCCCHHHCCCCCCEEEEECCCCCCCCCCCCEEEEEEECHHHHHHHHHHHH-
T ss_conf 5346543033158999417578753388777667653366755999746764456754217999839999999999997-
Q ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEE-E--ECCC
Q ss_conf 774212222222112221001221100100245653210123333444443210001223221103652289-8--5799
Q gi|254781091|r 232 GDQEKGQRAGTENYAVIGGFAVAAQQMVKDIQKRSSRVFAIRDYLEQELKKLIPNIIIYGKDAERISNTCCF-S--IPFL 308 (383)
Q Consensus 232 g~~e~~~~~GT~~~~~i~~~~~al~~~~~~~~~~~~~~~~L~~~l~~~l~~~~~~~~i~~~~~~~~~~i~~~-~--~~~~ 308 (383)
T Consensus 265 -----~~~~~~~~~~q-~aa~~al~~~~~~~~~~~~~~~~rr~~l~~~l~~~-~~~~~~~-----~G~~f~w~~~~~~~~ 332 (387)
T PRK07550 265 -----TMAICAPRIGQ-IAVLWGIRNLADWVAGNRAEILRRRDALRAGFSRL-PGWELLA-----SGAYFAYVRHPFPDA 332 (387)
T ss_pred -----HHCCCCCHHHH-HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHC-CCCEECC-----CCEEEEEEECCCCCC
T ss_conf -----60367877999-99999986309999999999999999999988646-8965478-----834799883788998
Q ss_pred CHHHHHHH-HHHCCCEEEECHHHCCCCCCCCHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 99999999-875896998711338864331014676288874765999907888999999999999999
Q gi|254781091|r 309 KAEVLQIA-LDLEGIAVSAGSACSSGKIKKNHVLAAMGFDTSQGAVRVSCGDSTTQEDIDIFLNALQKI 376 (383)
Q Consensus 309 ~~~~v~~~-l~~~gI~v~~G~~C~~~~~~~~~vl~~~g~~~~~g~vRiS~~~~nT~~dId~l~~~L~~i 376 (383)
T Consensus 333 ~~~~~~~~ll~e~gV~v~PG~~Fg~---------------~g~~~vRlsfa-~~~~~~i~ea~~RL~~f 385 (387)
T PRK07550 333 SSDEVARRLAKEAGILCLPGTMFGP---------------GGERYLRLAFA-NIDVAGIAELVERLRGF 385 (387)
T ss_pred CHHHHHHHHHHHCCEEEECCHHHCC---------------CCCCEEEEEEC-CCCHHHHHHHHHHHHHH
T ss_conf 9999999999869999978753388---------------99897999946-79999999999999865