HHsearch alignment for GI: 254781091 and conserved domain: PRK08247
>PRK08247 cystathionine gamma-synthase; Reviewed.
Probab=99.67 E-value=6.4e-16 Score=116.18 Aligned_cols=293 Identities=18% Similarity=0.086 Sum_probs=157.1
Q ss_pred HHHHHHHHHHHHHHHCCCCHHHEEEECCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCC----CCCCCCCCC
Q ss_conf 9999999999999972989778988668538764455654421022456645873332122111222----222222222
Q gi|254781091|r 43 TRLYIEESRRIIADFCGAKPDHVVFTSSATEAANWVLTPHFYQGSHKISIDSLYISAIEHPAVYAGG----HFPSHKIHK 118 (383)
Q Consensus 43 ~~~~~e~aR~~ia~~~g~~~~ei~ft~~~T~a~~~~i~~~~~~~~~~~~~~~ii~s~~eH~s~~~~~----~~~~~~v~~ 118 (383)
T Consensus 53 t~~~le~---~la~LEg~~~a-~~f~SGm-aAi~~-~l~~------l~~Gd~vv~~~~~Yg~t~~~~~~~l~~~Gi~~~~ 120 (366)
T PRK08247 53 TRGLLEQ---AIADLEGGDQG-FACSSGM-AAIQL-VMSL------FRSGDELIVSSDLYGGTYRLFEEHWKKWGVRFVY 120 (366)
T ss_pred HHHHHHH---HHHHHHCCCCE-EECCCHH-HHHHH-HHHH------HCCCCEEEEECCCCCCHHHHHHHHHCCCCEEEEE
T ss_conf 7999999---99998298505-3116689-99999-9997------3899989995896864889988775077469998
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCE
Q ss_conf 22222221110234553244311356532654034344433321123565203446533444323365544444334310
Q gi|254781091|r 119 IPVLSKGIVDIQALTDFLEQRNSTCGIPMIAVMFVNNETGVIQPIKEIAQIVKEYQGILVVDAVQAAGRIPLSIEEIKAD 198 (383)
Q Consensus 119 v~~~~~g~i~~~~l~~~i~~~t~~~~~~LVs~~~~~n~tG~i~pi~~I~~~~~~~g~~~~vD~aqa~g~~~id~~~~~~D 198 (383)
T Consensus 121 ~d~~-----d~~~~~~~i~~~Tk-----li~~Esp~NP~l~v~Di~~i~~iA~~~g~~~vvDNT~atP~~-~~Pl~~GaD 189 (366)
T PRK08247 121 VNTA-----SIKAIEQAITPNTK-----AIFIETPTNPLMQETDIAAIAKIAKKHGLLLIVDNTFYTPVL-QRPLTEGAD 189 (366)
T ss_pred ECCC-----CHHHHHHHCCCCCE-----EEEEECCCCCCCCCCCHHHHHHHHHHCCCEEEECCCCCCCCC-CCCHHCCCC
T ss_conf 4888-----97999975386754-----999855999853501599999998646704984177344133-574102897
Q ss_pred EEEECCCCCCCCCC---CHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHH
Q ss_conf 68730543322343---201101457420122122477421222222211222100122110010024565321012333
Q gi|254781091|r 199 FLIISSHKLGAPVG---AGALVFREDILLPSPLLRGGDQEKGQRAGTENYAVIGGFAVAAQQMVKDIQKRSSRVFAIRDY 275 (383)
Q Consensus 199 ~~~~S~hK~~GP~G---~G~L~~r~~~~~~~p~~~Gg~~e~~~~~GT~~~~~i~~~~~al~~~~~~~~~~~~~~~~L~~~ 275 (383)
T Consensus 190 ivihS~TKyi~GhsDvl~G~vv~~~~~~~-~~l~~----~~~~~G~~~~p~~a~l~~rGl~TL~lR~~~~~----~nA~~ 260 (366)
T PRK08247 190 IVIHSATKYLGGHNDVLAGLVVAKGQELC-ERLAY----YQNAAGAVLSPFDSWLLIRGMKTLALRMRQHE----ENAKA 260 (366)
T ss_pred EEEEECCCCCCCCCCEEEEEEEECCHHHH-HHHHH----HHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHH----HHHHH
T ss_conf 89974242015888715479972738888-89999----99733667793777788635250999999999----99999
Q ss_pred HHHHHHHHHHCCC-CCCCCCCCCCCEEEEEECCCCHHHHHHHHHH---CCCEEEECHHHC---CCC-CC----CCHHHHH
Q ss_conf 3444443210001-2232211036522898579999999999875---896998711338---864-33----1014676
Q gi|254781091|r 276 LEQELKKLIPNII-IYGKDAERISNTCCFSIPFLKAEVLQIALDL---EGIAVSAGSACS---SGK-IK----KNHVLAA 343 (383)
Q Consensus 276 l~~~l~~~~~~~~-i~~~~~~~~~~i~~~~~~~~~~~~v~~~l~~---~gI~v~~G~~C~---~~~-~~----~~~vl~~ 343 (383)
T Consensus 261 lA~~L~~h-p~V~~V~yP---G~gg~~sf~l~~--~~~~~~f~~~l~l~~~a~SlGg~eSLi~~pa~~th~~~~~~~r~~ 334 (366)
T PRK08247 261 LAAFLNEQ-PGVTDVLYP---GKGGMLSFRLQD--EEWVNPFLKSLKLITFAESLGGVESFITYPATQTHMDIPEEIRIA 334 (366)
T ss_pred HHHHHHCC-CCEEEEECC---CCCCEEEEEECC--HHHHHHHHHHCCCCEEECCCCCCCCEEECCCCCCCCCCCHHHHHH
T ss_conf 99998619-970489569---987779999788--899999998474366812657677244576424542289999997
Q ss_pred CCCCCCCCEEEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 28887476599990788899999999999999
Q gi|254781091|r 344 MGFDTSQGAVRVSCGDSTTQEDIDIFLNALQK 375 (383)
Q Consensus 344 ~g~~~~~g~vRiS~~~~nT~~dId~l~~~L~~ 375 (383)
T Consensus 335 ~Gi~--~~liRlSvGLEd~~DLi~Dl~qAL~~ 364 (366)
T PRK08247 335 NGVC--NRLLRFSVGIENVEDLKADLKQAFKQ 364 (366)
T ss_pred CCCC--CCEEEEEEEECCHHHHHHHHHHHHHH
T ss_conf 5989--29599995008999999999999995