HHsearch alignment for GI: 254781091 and conserved domain: PRK08443
>PRK08443 consensus.
Probab=99.87 E-value=2.4e-20 Score=143.01 Aligned_cols=316 Identities=17% Similarity=0.185 Sum_probs=193.6
Q ss_pred CCCHHHHHHHHHHHHH----CCCCCHHHHHHHHHHHHHHHHHHHHHHH----CC--CCHHHEEEECCHHHHHHHHHHHHH
Q ss_conf 9898999999999964----2885236589999999999999999997----29--897789886685387644556544
Q gi|254781091|r 14 PLLEVVRQSFVKSLDF----YGNPSSVHKEGQKTRLYIEESRRIIADF----CG--AKPDHVVFTSSATEAANWVLTPHF 83 (383)
Q Consensus 14 p~~~~v~~a~~~~~~~----~~n~~s~h~~~~~~~~~~e~aR~~ia~~----~g--~~~~ei~ft~~~T~a~~~~i~~~~ 83 (383)
T Consensus 42 ~~p~~i~~a~~~a~~~~~~~Y~~~~G-----------~~~lr~aia~~~~~~~g~~~~pe~I~it~G~~~al~~~~~al~ 110 (388)
T PRK08443 42 DTPQAIKDAAIKAIEKGFTKYTAVAG-----------IPELLKAIATKLKKDNNLDYETNEIITSNGAKHSLFNVFQALI 110 (388)
T ss_pred CCCHHHHHHHHHHHHCCCCCCCCCCC-----------CHHHHHHHHHHHHHHHCCCCCHHEEEECCCHHHHHHHHHHHHC
T ss_conf 87999999999998559998899988-----------7999999999999985899883129986887999999999980
Q ss_pred HHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC--CCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCC
Q ss_conf 21022456645873332122111222222222222222222--2111023455324431135653265403434443332
Q gi|254781091|r 84 YQGSHKISIDSLYISAIEHPAVYAGGHFPSHKIHKIPVLSK--GIVDIQALTDFLEQRNSTCGIPMIAVMFVNNETGVIQ 161 (383)
Q Consensus 84 ~~~~~~~~~~~ii~s~~eH~s~~~~~~~~~~~v~~v~~~~~--g~i~~~~l~~~i~~~t~~~~~~LVs~~~~~n~tG~i~ 161 (383)
T Consensus 111 ~------pGD~Vlv~~P~Y~~y~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~i~~~~k-----~iil~~P~NPTG~v~ 179 (388)
T PRK08443 111 E------KGDEVIIPSPYWVTYPELVKYSGGVPVFIETDEENGFKITAEQLKKAITPKTK-----VLVLNTPSNPTGSVY 179 (388)
T ss_pred C------CCCEEEECCCCCCCHHHHHHHHCCEEEEEEECCCCCCCCCHHHHHHHCCCCCE-----EEEECCCCCCCCCCC
T ss_conf 9------99989982687442399999808847998655434867799999974787873-----999868989988476
Q ss_pred C---HHHHHHHHCCCCCCCCCCCCCCC----CCC-C-CCC--CCCCCEEEEECCCCCCCCCC--CHHHHCCCC-CCCCCC
Q ss_conf 1---12356520344653344432336----554-4-444--33431068730543322343--201101457-420122
Q gi|254781091|r 162 P---IKEIAQIVKEYQGILVVDAVQAA----GRI-P-LSI--EEIKADFLIISSHKLGAPVG--AGALVFRED-ILLPSP 227 (383)
Q Consensus 162 p---i~~I~~~~~~~g~~~~vD~aqa~----g~~-~-id~--~~~~~D~~~~S~hK~~GP~G--~G~L~~r~~-~~~~~p 227 (383)
T Consensus 180 s~~~l~~l~~~a~~~~~~ii~DE~Y~~l~~~~~~~~~~~~~~~~~~~~I~i~S~SK~~~~~G~RiG~~~~p~~~l~~~~~ 259 (388)
T PRK08443 180 SKEELEAIAKVLKGTDIWVLSDEMYEKLVYDGEFVSVASVSEDMFKRTITINGLSKSVAMTGWRFGYMASKNKKLIKAMK 259 (388)
T ss_pred CHHHHHHHHHHHHCCCCEEECCHHHHHHCCCCCCCCHHHHHCCCCCCEEEECCCCHHCCCCCCCEEEEEECCHHHHHHHH
T ss_conf 44789999998623575674220124322699878889972224467899803432005865146999818699999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEE-EEEE
Q ss_conf 122477421222222211222100122110-01002456532101233334444432100012232211036522-8985
Q gi|254781091|r 228 LLRGGDQEKGQRAGTENYAVIGGFAVAAQQ-MVKDIQKRSSRVFAIRDYLEQELKKLIPNIIIYGKDAERISNTC-CFSI 305 (383)
Q Consensus 228 ~~~Gg~~e~~~~~GT~~~~~i~~~~~al~~-~~~~~~~~~~~~~~L~~~l~~~l~~~~~~~~i~~~~~~~~~~i~-~~~~ 305 (383)
T Consensus 260 ~~~-----~~~~~~-~~~~~q~aa~~al~~~~~~~~~~~~~~~~~~r~~~~~~l~~-~~g~~~~~P~----g~~~~w~~~ 328 (388)
T PRK08443 260 KLQ-----SQSTSN-INSITQKAAIPALNGECDKDIEKMRQAFEKRRDLAVDAINA-IPGLSVYKPD----GAFYLFVNI 328 (388)
T ss_pred HHH-----HHCCCC-HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH-CCCCEEECCC----EEEEEEEEC
T ss_conf 997-----446787-01799999999985452478999999999999999999874-7896761688----347997888
Q ss_pred CC--CCHHHHH-HHHHHCCCEEEECHHHCCCCCCCCHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 79--9999999-9987589699871133886433101467628887476599990788899999999999999998623
Q gi|254781091|r 306 PF--LKAEVLQ-IALDLEGIAVSAGSACSSGKIKKNHVLAAMGFDTSQGAVRVSCGDSTTQEDIDIFLNALQKIIRTST 381 (383)
Q Consensus 306 ~~--~~~~~v~-~~l~~~gI~v~~G~~C~~~~~~~~~vl~~~g~~~~~g~vRiS~~~~nT~~dId~l~~~L~~iv~~~~ 381 (383)
T Consensus 329 ~~~~~d~~~f~~~ll~~~gV~v~PG~~F--------------g---~~g~vRl~~~--~~~e~l~ea~~RL~~~l~~~r 388 (388)
T PRK08443 329 KKIEKDSMKFCKKLLEQEGVAVVPGIGF--------------G---MEGYFRLSFA--TSIESIKKGIERIANFVKSYK 388 (388)
T ss_pred CCCCCCHHHHHHHHHHHCCEEEECCCCC--------------C---CCCEEEEEEE--CCHHHHHHHHHHHHHHHHHCC
T ss_conf 8889999999999998199999727435--------------8---8985999982--889999999999999999649