HHsearch alignment for GI: 254781091 and conserved domain: PRK08574
>PRK08574 cystathionine gamma-synthase; Provisional.
Probab=99.63 E-value=2.7e-15 Score=112.33 Aligned_cols=297 Identities=17% Similarity=0.110 Sum_probs=152.2
Q ss_pred HHHHHHHHHHHHHHHCCCCHHHEEEECCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCC---CCCCCCCCC
Q ss_conf 99999999999999729897789886685387644556544210224566458733321221112222---222222222
Q gi|254781091|r 43 TRLYIEESRRIIADFCGAKPDHVVFTSSATEAANWVLTPHFYQGSHKISIDSLYISAIEHPAVYAGGH---FPSHKIHKI 119 (383)
Q Consensus 43 ~~~~~e~aR~~ia~~~g~~~~ei~ft~~~T~a~~~~i~~~~~~~~~~~~~~~ii~s~~eH~s~~~~~~---~~~~~v~~v 119 (383)
T Consensus 54 T~~~le~---~la~LEg~~~-a~~~-sSGmaAi~~~ll~~l~------~Gd~il~~~~~Yg~t~~l~~~l~~~Gi~v~~~ 122 (384)
T PRK08574 54 TVRPLEE---KLAKLEGGVD-ALAF-NSGMAAISTLFFSLLK------AGDEVVLPMEAYGTTLRLLKSLEKFGVRVRLA 122 (384)
T ss_pred HHHHHHH---HHHHHHCCCE-EEEE-CCHHHHHHHHHHHHCC------CCCEEEECCCCCHHHHHHHHHHHHHCCEEEEE
T ss_conf 5999999---9999819971-8995-5879999999998168------99989984897145999999998608579994
Q ss_pred CCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEE
Q ss_conf 22222211102345532443113565326540343444333211235652034465334443233655444443343106
Q gi|254781091|r 120 PVLSKGIVDIQALTDFLEQRNSTCGIPMIAVMFVNNETGVIQPIKEIAQIVKEYQGILVVDAVQAAGRIPLSIEEIKADF 199 (383)
Q Consensus 120 ~~~~~g~i~~~~l~~~i~~~t~~~~~~LVs~~~~~n~tG~i~pi~~I~~~~~~~g~~~~vD~aqa~g~~~id~~~~~~D~ 199 (383)
T Consensus 123 ~~~-----~~~~~~~~~~~~T-----klv~~EspsNP~l~v~Di~~ia~iA~~~g~~~vvDNT~atP~~-~~Pl~~GaDi 191 (384)
T PRK08574 123 YPS-----TEDLIEAIKESRT-----KLVFIETITNPTLRVIDVPEVAKAAKDLGAILVVDNTFATPIL-YRPLEHGADF 191 (384)
T ss_pred CCC-----CHHHHHHHCCCCC-----EEEEEECCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHH-CCHHHHCCCE
T ss_conf 899-----7899997447885-----4999988999876347859999999775985997377512642-6806648988
Q ss_pred EEECCCCCCCCCC---CHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHH
Q ss_conf 8730543322343---2011014574201221224774212222222112221001221100100245653210123333
Q gi|254781091|r 200 LIISSHKLGAPVG---AGALVFREDILLPSPLLRGGDQEKGQRAGTENYAVIGGFAVAAQQMVKDIQKRSSRVFAIRDYL 276 (383)
Q Consensus 200 ~~~S~hK~~GP~G---~G~L~~r~~~~~~~p~~~Gg~~e~~~~~GT~~~~~i~~~~~al~~~~~~~~~~~~~~~~L~~~l 276 (383)
T Consensus 192 vvhS~TKyi~GHsdv~~G~vv~~~~~~~-~~l~~----~~~~~G~~lsp~~a~l~~rgl~TL~lR~~~~~~nA~~----l 262 (384)
T PRK08574 192 VVHSLTKYIAGHNDVLGGVAVVWNGEFL-EELWV----WRRRLGTIMQPFEAWLVLRGLKTLEVRFERQCENAMA----I 262 (384)
T ss_pred EEEECCCEECCCCCCEEEEEEECCHHHH-HHHHH----HHHHHCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHH----H
T ss_conf 9995462103886734138983517889-99999----9998289889234788860658799999999999999----9
Q ss_pred HHHHHHHHHCCC-CCCCC-CC-------------CCCCEEEEEECCCCHHHHH---HHHHHCCCEEEECHHHCC---CCC
Q ss_conf 444443210001-22322-11-------------0365228985799999999---998758969987113388---643
Q gi|254781091|r 277 EQELKKLIPNII-IYGKD-AE-------------RISNTCCFSIPFLKAEVLQ---IALDLEGIAVSAGSACSS---GKI 335 (383)
Q Consensus 277 ~~~l~~~~~~~~-i~~~~-~~-------------~~~~i~~~~~~~~~~~~v~---~~l~~~gI~v~~G~~C~~---~~~ 335 (383)
T Consensus 263 A~~L~~h-p~V~~V~yPgl~shp~~~~a~~~~~g~~G~~~sf~l~~-~~~~~~~f~~~L~lf~~~~SlGg~eSLi~~P~~ 340 (384)
T PRK08574 263 AEFLSEH-PKVREVHYPGLPSDPYHEVAKRLFGDLYGGVVSFRVKG-GRDAVLKFLRSLKLIFPSPSLGGVESIATYPVA 340 (384)
T ss_pred HHHHHCC-CCCCEEECCCCCCCCCHHHHHHHCCCCCCEEEEEEECC-CHHHHHHHHHHCCCCEECCCCCCCCCEEECCCC
T ss_conf 9999709-99888989888999478999986799976499999729-999999999828857343164754222247310
Q ss_pred -----CCCHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHH
Q ss_conf -----310146762888747659999078889999999999999
Q gi|254781091|r 336 -----KKNHVLAAMGFDTSQGAVRVSCGDSTTQEDIDIFLNALQ 374 (383)
Q Consensus 336 -----~~~~vl~~~g~~~~~g~vRiS~~~~nT~~dId~l~~~L~ 374 (383)
T Consensus 341 ~sh~~~~~e~r~~~Gi~--~~liRlSvGlEd~~DLi~DL~~AL~ 382 (384)
T PRK08574 341 SAASPIPEEDRKILGIT--EDLVRLSVGLEDVEDLIEDLDQALN 382 (384)
T ss_pred CCCCCCCHHHHHHCCCC--CCEEEEEECCCCHHHHHHHHHHHHH
T ss_conf 36755999999972989--3949999410999999999999983