HHsearch alignment for GI: 254781091 and conserved domain: PRK13238
>PRK13238 tnaA tryptophanase; Provisional.
Probab=99.10 E-value=1e-08 Score=72.48 Aligned_cols=335 Identities=21% Similarity=0.243 Sum_probs=171.3
Q ss_pred EECC---CCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEECCHHHHHHHHHHH
Q ss_conf 0121---5788898989999999999642885236589999999999999999997298977898866853876445565
Q gi|254781091|r 5 VYLD---WNATAPLLEVVRQSFVKSLDFYGNPSSVHKEGQKTRLYIEESRRIIADFCGAKPDHVVFTSSATEAANWVLTP 81 (383)
Q Consensus 5 iYlD---~aattp~~~~v~~a~~~~~~~~~n~~s~h~~~~~~~~~~e~aR~~ia~~~g~~~~ei~ft~~~T~a~~~~i~~ 81 (383)
T Consensus 46 V~IDlLTDSGT~AMSd~Qwaamm~gDEsYAGs~sf~-----------~l~~av~di~G~~--~~iPtHQGRaAE~Ilf~~ 112 (461)
T PRK13238 46 VFIDLLTDSGTGAMSDRQWAAMMRGDEAYAGSRSYY-----------RLEDAVKDIFGYE--YTIPTHQGRAAEQILFPV 112 (461)
T ss_pred EEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCHHHH-----------HHHHHHHHHCCCC--EECCCCCCHHHHHHHHHH
T ss_conf 357642158813045999999984223431355499-----------9999999872986--445456637799999998
Q ss_pred HHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCC----------CCCCCCCHHHHHHHHHHHCCCCCCEEEEE
Q ss_conf 44210224566458733321221112222222222222222----------22211102345532443113565326540
Q gi|254781091|r 82 HFYQGSHKISIDSLYISAIEHPAVYAGGHFPSHKIHKIPVL----------SKGIVDIQALTDFLEQRNSTCGIPMIAVM 151 (383)
Q Consensus 82 ~~~~~~~~~~~~~ii~s~~eH~s~~~~~~~~~~~v~~v~~~----------~~g~i~~~~l~~~i~~~t~~~~~~LVs~~ 151 (383)
T Consensus 113 l~k~g------~-~vp~N~HFdTTrahie~~G~~~~dl~~~ea~d~~~~~pFKGN~Dl~kLe~~i~~~g~-~~I~~v~~t 184 (461)
T PRK13238 113 LIKKG------D-VVPSNYHFDTTRAHIELNGGTAVNLVIDEALDTGSRYPFKGNFDLEKLEALIEEVGA-DNIPFIVMT 184 (461)
T ss_pred HCCCC------C-EECCCCCCCCCHHHHHHCCCEEEEEECHHHCCCCCCCCCCCCCCHHHHHHHHHHHCC-CCCCEEEEE
T ss_conf 64699------7-857887856507888853986773054431495767897887799999999987384-465489999
Q ss_pred CCCCCCC----CCCCHHHHHHHHCCCCCCCCCCCCCCC-----------CCCCCCCCCC------CCEEEEECCCC-CCC
Q ss_conf 3434443----332112356520344653344432336-----------5544444334------31068730543-322
Q gi|254781091|r 152 FVNNETG----VIQPIKEIAQIVKEYQGILVVDAVQAA-----------GRIPLSIEEI------KADFLIISSHK-LGA 209 (383)
Q Consensus 152 ~~~n~tG----~i~pi~~I~~~~~~~g~~~~vD~aqa~-----------g~~~id~~~~------~~D~~~~S~hK-~~G 209 (383)
T Consensus 185 iTnN~~GGQPVSm~Nir~v~~la~~~~ip~~lDaaRfaENAyFIk~RE~gY~d~si~eI~rEmfs~aDg~tmSaKKD~~v 264 (461)
T PRK13238 185 ITNNSAGGQPVSMANLRAVYEIAKKYGIPVVLDAARFAENAYFIKQREPGYKDKSIKEITREMFSYADGLTMSAKKDAMV 264 (461)
T ss_pred EEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHEEEEEECCCCEE
T ss_conf 86268788164689999999999982995998656676645788732531257999999999984523799983301210
Q ss_pred CCCCHHHHCCCC--CCCC----CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 343201101457--4201----2212247742122222221122210012211001002456532101233334444432
Q gi|254781091|r 210 PVGAGALVFRED--ILLP----SPLLRGGDQEKGQRAGTENYAVIGGFAVAAQQMVKDIQKRSSRVFAIRDYLEQELKKL 283 (383)
Q Consensus 210 P~G~G~L~~r~~--~~~~----~p~~~Gg~~e~~~~~GT~~~~~i~~~~~al~~~~~~~~~~~~~~~~L~~~l~~~l~~~ 283 (383)
T Consensus 265 ni-GG~l~~~d~~~l~~~~~~~~i~~EG-----f~TYGGlaGRDmeAlAvGL~E~~d--~dyl~~Ri~qv~yLg~~L~~~ 336 (461)
T PRK13238 265 NI-GGLLCFKDDSDLYTKCRTLCILYEG-----FPTYGGLAGRDMEALAVGLYEGMD--EDYLAYRIAQVEYLGEGLEEA 336 (461)
T ss_pred CC-CCEEEECCHHHHHHHHHHHEEECCC-----CCCCCCCCHHHHHHHHCCHHHHCC--HHHHHHHHHHHHHHHHHHHHC
T ss_conf 44-2289966759999998744242058-----756688338779999735787607--799997799999999999977
Q ss_pred HHCCCCCCCCCC---------CCCCEEEEEECCCCHHHHHHHHH-HCCCE-EEECHHHCCCCCCCCHHHHHCCCCCCC--
Q ss_conf 100012232211---------03652289857999999999987-58969-987113388643310146762888747--
Q gi|254781091|r 284 IPNIIIYGKDAE---------RISNTCCFSIPFLKAEVLQIALD-LEGIA-VSAGSACSSGKIKKNHVLAAMGFDTSQ-- 350 (383)
Q Consensus 284 ~~~~~i~~~~~~---------~~~~i~~~~~~~~~~~~v~~~l~-~~gI~-v~~G~~C~~~~~~~~~vl~~~g~~~~~-- 350 (383)
T Consensus 337 --GVPvv~P~GGHAv~iDA~~fLPhip~~---qfPa~aLa~eLY~~~GIR~vEiGs~~~gr--dp~-----tg~~~~~~~ 404 (461)
T PRK13238 337 --GVPVVTPAGGHAVFVDAGKFLPHIPAE---QFPAQALACELYLEAGIRAVEIGSLLLGR--DPD-----TGEQLPAPA 404 (461)
T ss_pred --CCCEECCCCCEEEEEEHHHHCCCCCHH---HCCHHHHHHHHHHHCCCCEEEECCHHCCC--CCC-----CCCCCCCCC
T ss_conf --997056798518997467856799814---48189999999997295578750012054--888-----766578760
Q ss_pred CEEEEEECC-CCCHHHHHHHHHHHHHHHHHH
Q ss_conf 659999078-889999999999999999862
Q gi|254781091|r 351 GAVRVSCGD-STTQEDIDIFLNALQKIIRTS 380 (383)
Q Consensus 351 g~vRiS~~~-~nT~~dId~l~~~L~~iv~~~ 380 (383)
T Consensus 405 ELvRLAiPRRvYT~sH~dyva~~l~~l~~~r 435 (461)
T PRK13238 405 ELLRLAIPRRVYTQSHMDYVAEALKWVKENR 435 (461)
T ss_pred CCEEEECCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 0002424500035889999999999999567