HHsearch alignment for GI: 254781091 and conserved domain: PRK13355
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional.
Probab=99.79 E-value=1e-17 Score=127.07 Aligned_cols=327 Identities=17% Similarity=0.179 Sum_probs=194.3
Q ss_pred CCCHHHHHHHHHHHH---HCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEECCHHHHHHHHHHHHHHHCCCCC
Q ss_conf 989899999999996---42885236589999999999999999997298977898866853876445565442102245
Q gi|254781091|r 14 PLLEVVRQSFVKSLD---FYGNPSSVHKEGQKTRLYIEESRRIIADFCGAKPDHVVFTSSATEAANWVLTPHFYQGSHKI 90 (383)
Q Consensus 14 p~~~~v~~a~~~~~~---~~~n~~s~h~~~~~~~~~~e~aR~~ia~~~g~~~~ei~ft~~~T~a~~~~i~~~~~~~~~~~ 90 (383)
T Consensus 162 ~~p~~~~~~~~~~~~~~~gy~~s~g~~~a-r~a---~~~-~~q~~~~~~~~~~di~~gnGvSE~i~~am~Alln------ 230 (518)
T PRK13355 162 RTPDEVVYDMAHQLPDTEGYSPSKGLFSA-RKA---IMQ-YAQLKNIPNVDIDDIYTGNGVSELINLSMSALLD------ 230 (518)
T ss_pred CCCHHHHHHHHHHCCCCCCCCCCCCCHHH-HHH---HHH-HHHHCCCCCCCHHHEEECCCHHHHHHHHHHHHCC------
T ss_conf 89489999999737234587545575689-999---999-9997699998740356547767999999998368------
Q ss_pred CCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCC--CCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCC---HHH
Q ss_conf 664587333212211122222222222222222--221110234553244311356532654034344433321---123
Q gi|254781091|r 91 SIDSLYISAIEHPAVYAGGHFPSHKIHKIPVLS--KGIVDIQALTDFLEQRNSTCGIPMIAVMFVNNETGVIQP---IKE 165 (383)
Q Consensus 91 ~~~~ii~s~~eH~s~~~~~~~~~~~v~~v~~~~--~g~i~~~~l~~~i~~~t~~~~~~LVs~~~~~n~tG~i~p---i~~ 165 (383)
T Consensus 231 ~GDeVLiP~P~YPlyta~v~L~Gg~pV~y~~dEe~~w~PDiedLe~kIT~kTK-----AIVInNPNNPTGAVyS~E~Lee 305 (518)
T PRK13355 231 DGDEVLVPSPDYPLWTACVNLAGGTAVHYRCDEESEWYPDIDDIRSKITSKTK-----AIVIINPNNPTGALYPKEVLQQ 305 (518)
T ss_pred CCCEEEECCCCCCCHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHCCCCCE-----EEEEECCCCCCCCCCCHHHHHH
T ss_conf 99989825999977899988609878898745221778899999853571557-----9999689898887889999999
Q ss_pred HHHHHCCCCCCCCCCCCCC----CCCCCCCCCCCCCE--EEEECC-CCCC---CCCCCHHHHCCCCCCCCCCCCCCCCCC
Q ss_conf 5652034465334443233----65544444334310--687305-4332---234320110145742012212247742
Q gi|254781091|r 166 IAQIVKEYQGILVVDAVQA----AGRIPLSIEEIKAD--FLIISS-HKLG---APVGAGALVFREDILLPSPLLRGGDQE 235 (383)
Q Consensus 166 I~~~~~~~g~~~~vD~aqa----~g~~~id~~~~~~D--~~~~S~-hK~~---GP~G~G~L~~r~~~~~~~p~~~Gg~~e 235 (383)
T Consensus 306 IaeiArehdLiIISDEIY~~LvYDg~~h~Siasla~d~~~It~NG~SKsyaMtGWR-iGwmv~sG~~~~a~~~Ie~l~~L 384 (518)
T PRK13355 306 IVDIAREHQLIIFSDEIYDRLVMDGLEHTSIASLAPDLFCVTFSGLSKSHMIAGFR-AGWMMLSGNKRHAKDYIEGLNML 384 (518)
T ss_pred HHHHHHHCCEEEEECCCHHHCCCCCCCCCCHHHCCCCCEEEEECCCCCCEECCEEE-EEEEEECCCHHHHHHHHHHHHHH
T ss_conf 99999985969996230221006898630476708864599988776663322011-36654248589999999999998
Q ss_pred CCCCCCCCCCCCCCCHHHHHHCCCC--HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEE-E--C--CC
Q ss_conf 1222222211222100122110010--02456532101233334444432100012232211036522898-5--7--99
Q gi|254781091|r 236 KGQRAGTENYAVIGGFAVAAQQMVK--DIQKRSSRVFAIRDYLEQELKKLIPNIIIYGKDAERISNTCCFS-I--P--FL 308 (383)
Q Consensus 236 ~~~~~GT~~~~~i~~~~~al~~~~~--~~~~~~~~~~~L~~~l~~~l~~~~~~~~i~~~~~~~~~~i~~~~-~--~--~~ 308 (383)
T Consensus 385 as~~l-csnvpaQ~A~~aAL~g~qs~~d~~~~~~rl~erRdlv~e~Ln~-IpGvscvkP~----GAFYlFPkID~~~~~i 458 (518)
T PRK13355 385 ANMRM-CSNVPAQSVVQTALGGHQSVKDYTVPGGRLYDQRELVYDMLNA-IPGISAVKPK----AAFYIFPKIDVKIFNI 458 (518)
T ss_pred HHCCC-CCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHC-CCCCEECCCC----EEEEEEEECCCCCCCC
T ss_conf 60456-6368999999998628764899999999999999999999835-9997658998----1589955415344899
Q ss_pred -CHHH-HHHHHHHCCCEEEECHHHCCCCCCCCHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf -9999-99998758969987113388643310146762888747659999078889999999999999999862
Q gi|254781091|r 309 -KAEV-LQIALDLEGIAVSAGSACSSGKIKKNHVLAAMGFDTSQGAVRVSCGDSTTQEDIDIFLNALQKIIRTS 380 (383)
Q Consensus 309 -~~~~-v~~~l~~~gI~v~~G~~C~~~~~~~~~vl~~~g~~~~~g~vRiS~~~~nT~~dId~l~~~L~~iv~~~ 380 (383)
T Consensus 459 ~dDeeFal~LL~Ee~VlVVPGsa--------------FG~-~~pghfRIsya--ps~e~L~EA~~RI~~FL~~y 515 (518)
T PRK13355 459 HSDEQFALDLLHEKHILISHGGA--------------FNW-DKPDHFRVVYL--PRLGMLEETMDELDDFFSYY 515 (518)
T ss_pred CCHHHHHHHHHHHCCEEEECCCC--------------CCC-CCCCEEEEEEC--CCHHHHHHHHHHHHHHHHHH
T ss_conf 89999999999858999958754--------------489-99897999927--99999999999999999986