>TIGR00461 gcvP glycine dehydrogenase; InterPro: IPR003437 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T . The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0006544 glycine metabolic process, 0005961 glycine dehydrogenase complex (decarboxylating).

Probab=99.27 E-value=2.7e-11 Score=88.16 Aligned_cols=306 Identities=18% Similarity=0.269 Sum_probs=177.6 Q ss_pred HHHHHHHHHHHCCCCHHHEEEECC-HHHHH---HHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 999999999972989778988668-53876---44556544210224566458733321221112222222222222222 Q gi|254781091|r 47 IEESRRIIADFCGAKPDHVVFTSS-ATEAA---NWVLTPHFYQGSHKISIDSLYISAIEHPAVYAGGHFPSHKIHKIPVL 122 (383) Q Consensus 47 ~e~aR~~ia~~~g~~~~ei~ft~~-~T~a~---~~~i~~~~~~~~~~~~~~~ii~s~~eH~s~~~~~~~~~~~v~~v~~~ 122 (383) T Consensus 553 ia~Le~wL~~iTGfD--aislQPNsGaQGEYaGL~vIR~YheSrg-E~hRniCLIP~SAHGTNPASA~MaGm~VVpV~Cd 629 (965) T TIGR00461 553 IAQLEKWLVEITGFD--AISLQPNSGAQGEYAGLRVIRSYHESRG-EEHRNICLIPVSAHGTNPASAAMAGMQVVPVKCD 629 (965) T ss_pred HHHHHHHHHHCCCCC--CEECCCCCCCHHHHHHHHHHHHHHHHCC-CCCCCEEECCCCCCCCCHHHHHHCCCEEEEEEEC T ss_conf 999988752105766--2441788884466788999999876058-8987445307776788728996169868987656 Q ss_pred CCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCC-HHHHHHHHCCCCCCCCCCCCC---CCCCCCCCCCCCCCE Q ss_conf 2221110234553244311356532654034344433321-123565203446533444323---365544444334310 Q gi|254781091|r 123 SKGIVDIQALTDFLEQRNSTCGIPMIAVMFVNNETGVIQP-IKEIAQIVKEYQGILVVDAVQ---AAGRIPLSIEEIKAD 198 (383) Q Consensus 123 ~~g~i~~~~l~~~i~~~t~~~~~~LVs~~~~~n~tG~i~p-i~~I~~~~~~~g~~~~vD~aq---a~g~~~id~~~~~~D 198 (383) T Consensus 630 ~~GniDl~DL~~KAEq~gd~Laa--~MvTYPST-hGvfE~tI~~~~diVH~FGGqVYlDGANMNAQVGl--tsPgd~GAD 704 (965) T TIGR00461 630 KDGNIDLVDLKAKAEQYGDELAA--VMVTYPST-HGVFEETIREVCDIVHRFGGQVYLDGANMNAQVGL--TSPGDLGAD 704 (965) T ss_pred CCCCEEHHHHHHHHHHCCCCEEE--EEEECCCC-CCCCHHHHCCEEEEEECCCCEEEECCCCCCCCCCC--CCCCCCCCC T ss_conf 99950077778888750665256--77505877-66432221001311442688475245664223366--786110563 Q ss_pred EEEECCCC-CCCCCCC-----HHHHCCCCCCCCCCC--------CCCCCCCCCCCCCCCCCCCCCCHHHHHHC----CCC Q ss_conf 68730543-3223432-----011014574201221--------22477421222222211222100122110----010 Q gi|254781091|r 199 FLIISSHK-LGAPVGA-----GALVFREDILLPSPL--------LRGGDQEKGQRAGTENYAVIGGFAVAAQQ----MVK 260 (383) Q Consensus 199 ~~~~S~hK-~~GP~G~-----G~L~~r~~~~~~~p~--------~~Gg~~e~~~~~GT~~~~~i~~~~~al~~----~~~ 260 (383) T Consensus 705 VcHLNLHKTFcIPHGGGGPgmgPIgVKsHL~pflP~~~~~s~~~~~g~~~sig~vSa-APyGsAsiLpISw~YI~MMG~e 783 (965) T TIGR00461 705 VCHLNLHKTFCIPHGGGGPGMGPIGVKSHLIPFLPKTDVVSVVELEGESKSIGAVSA-APYGSASILPISWMYIKMMGAE 783 (965) T ss_pred HHHHHCCCCEECCCCCCCCCCCCHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCEEC-CCCCCHHHHHHHHHHHHHHCCC T ss_conf 434305442012686787877522246402245888760001565312324354523-6545414668899999852201 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC-CCCCCCCCEEEEEEC------CCCHHHHHHHHHHCCCEEEECHHHCCC Q ss_conf 0245653210123333444443210001223-221103652289857------999999999987589699871133886 Q gi|254781091|r 261 DIQKRSSRVFAIRDYLEQELKKLIPNIIIYG-KDAERISNTCCFSIP------FLKAEVLQIALDLEGIAVSAGSACSSG 333 (383) Q Consensus 261 ~~~~~~~~~~~L~~~l~~~l~~~~~~~~i~~-~~~~~~~~i~~~~~~------~~~~~~v~~~l~~~gI~v~~G~~C~~~ 333 (383) T Consensus 784 GL~kas~vAiLnaNYma~RL~d~ypiLf~nemg~~~~vAHEcIlDlRplK~~~gie~~DvAKRL~DyGFHAPT~------ 857 (965) T TIGR00461 784 GLKKASEVAILNANYMAKRLKDYYPILFVNEMGRDKRVAHECILDLRPLKKKAGIEALDVAKRLIDYGFHAPTL------ 857 (965) T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEEEEECHHHHHHHHCCCHHHHHHHHHCCCCCCCCC------ T ss_conf 35035577756266899887610765443115788831356763525545651765445676641157765332------ Q ss_pred CCCCCHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHH Q ss_conf 4331014676288874765999907888999999999999999986 Q gi|254781091|r 334 KIKKNHVLAAMGFDTSQGAVRVSCGDSTTQEDIDIFLNALQKIIRT 379 (383) Q Consensus 334 ~~~~~~vl~~~g~~~~~g~vRiS~~~~nT~~dId~l~~~L~~iv~~ 379 (383) T Consensus 858 ---sfPV~---------GTlMvEPTESEsl~ELDRF~DAMiaI~~E 891 (965) T TIGR00461 858 ---SFPVA---------GTLMVEPTESESLEELDRFCDAMIAIKEE 891 (965) T ss_pred ---CCCCC---------CCCCCCCCCCCCCCHHHHHHHHHHHHHHH T ss_conf ---33678---------74200554656631245888899999999

HHsearch alignment for GI: 254781091 and conserved domain: TIGR00461