>TIGR00461 gcvP glycine dehydrogenase; InterPro: IPR003437 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T . The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0006544 glycine metabolic process, 0005961 glycine dehydrogenase complex (decarboxylating).

Probab=97.79 E-value=8.6e-05 Score=48.74 Aligned_cols=286 Identities=17% Similarity=0.224 Sum_probs=148.6 Q ss_pred HHHHHHCCCCHHHEEEECCHHHHH-HHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCC Q ss_conf 999997298977898866853876-445565442102245664587333212211122222222--22222222222111 Q gi|254781091|r 52 RIIADFCGAKPDHVVFTSSATEAA-NWVLTPHFYQGSHKISIDSLYISAIEHPAVYAGGHFPSH--KIHKIPVLSKGIVD 128 (383) Q Consensus 52 ~~ia~~~g~~~~ei~ft~~~T~a~-~~~i~~~~~~~~~~~~~~~ii~s~~eH~s~~~~~~~~~~--~v~~v~~~~~g~i~ 128 (383) T Consensus 120 tvv~DLTGL~~AnASLLDEgTAAaEAMals~~vSk---~Knan~ffva~d~HpQT~~V~~TRA~pfgiEvIv~D~~~~-- 194 (965) T TIGR00461 120 TVVLDLTGLEVANASLLDEGTAAAEAMALSFRVSK---KKNANKFFVAKDVHPQTLEVVKTRAKPFGIEVIVDDASDV-- 194 (965) T ss_pred HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHCCCHHHHCCCCCCHHHHHHCCCCCCEEEEECCHHHH-- T ss_conf 45430024346545332178899999999876422---2211011021037734368875240314516886344555-- Q ss_pred CHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCC---CHHHHHHHHCCCCCCCCCCCCCCCC-CCCCCCCCCCCEEEEECC Q ss_conf 023455324431135653265403434443332---1123565203446533444323365-544444334310687305 Q gi|254781091|r 129 IQALTDFLEQRNSTCGIPMIAVMFVNNETGVIQ---PIKEIAQIVKEYQGILVVDAVQAAG-RIPLSIEEIKADFLIISS 204 (383) Q Consensus 129 ~~~l~~~i~~~t~~~~~~LVs~~~~~n~tG~i~---pi~~I~~~~~~~g~~~~vD~aqa~g-~~~id~~~~~~D~~~~S~ 204 (383) T Consensus 195 -~~~~d-vfknPdvsG---~LlQypa-TdG~i~PPddy~~lid~lhshk~lvsvAaD-~maLtLL~pPg~~GADIv~GS~ 267 (965) T TIGR00461 195 -KKAVD-VFKNPDVSG---VLLQYPA-TDGEIYPPDDYKALIDKLHSHKALVSVAAD-LMALTLLTPPGKLGADIVLGSS 267 (965) T ss_pred -HHHHH-HHCCCCCCE---EEEECCC-CCCCCCCCHHHHHHHHHHHCCHHHHHHHHH-HHHHHHCCCCHHCCCCEEEECC T ss_conf -65443-321777441---5762357-777236862289999987413012467878-9999850582130886786254 Q ss_pred CCCCCCCC-----CHHHHCCCCCCCCCCC-CCC------C-----------CCCCCCCCCCCCCC--CC----CCHHHHH Q ss_conf 43322343-----2011014574201221-224------7-----------74212222222112--22----1001221 Q gi|254781091|r 205 HKLGAPVG-----AGALVFREDILLPSPL-LRG------G-----------DQEKGQRAGTENYA--VI----GGFAVAA 255 (383) Q Consensus 205 hK~~GP~G-----~G~L~~r~~~~~~~p~-~~G------g-----------~~e~~~~~GT~~~~--~i----~~~~~al 255 (383) T Consensus 268 QRFGvPmGYGGPHAAfFA~kdey~Rk~PGRIvGvSKDa~G~tALRlAlQTREQHIrRdKAtSNICTaQvLLAn~AS~Y~V 347 (965) T TIGR00461 268 QRFGVPMGYGGPHAAFFAVKDEYKRKMPGRIVGVSKDALGNTALRLALQTREQHIRRDKATSNICTAQVLLANVASLYAV 347 (965) T ss_pred CCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCC T ss_conf 32565688872448999999984488995067651134587789988631222010024566236899999998875011 Q ss_pred HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCH--HHHHHHHHHCCCEEEECHHHCCC Q ss_conf 1001002456532101233334444432100012232211036522898579999--99999987589699871133886 Q gi|254781091|r 256 QQMVKDIQKRSSRVFAIRDYLEQELKKLIPNIIIYGKDAERISNTCCFSIPFLKA--EVLQIALDLEGIAVSAGSACSSG 333 (383) Q Consensus 256 ~~~~~~~~~~~~~~~~L~~~l~~~l~~~~~~~~i~~~~~~~~~~i~~~~~~~~~~--~~v~~~l~~~gI~v~~G~~C~~~ 333 (383) T Consensus 348 YHGp~GLknIa~RIh~LT~iLA~gl~~~sC~~~L~n~-~--~FDTL~v~vg~~~~~~ql~lkaae~~~INLr~------- 417 (965) T TIGR00461 348 YHGPKGLKNIARRIHRLTSILAAGLKRKSCNYELRNK-Y--YFDTLTVKVGDKASSEQLVLKAAEEAEINLRA------- 417 (965) T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC-C--CCCEEEEEECCCCCHHHHHHHHHHHCCCCCCC------- T ss_conf 0266457899999888999999997530688511435-3--34303663033466578999999755885221------- Q ss_pred CCCCCHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHH Q ss_conf 4331014676288874765999907888999999999999 Q gi|254781091|r 334 KIKKNHVLAAMGFDTSQGAVRVSCGDSTTQEDIDIFLNAL 373 (383) Q Consensus 334 ~~~~~~vl~~~g~~~~~g~vRiS~~~~nT~~dId~l~~~L 373 (383) T Consensus 418 --------------~~~~~vgi~LDETtT~~dv~~L~~Vf 443 (965) T TIGR00461 418 --------------VVLTEVGIALDETTTKEDVLDLLKVF 443 (965) T ss_pred --------------CCCCCEEEEECCHHHHHHHHHHHHHH T ss_conf --------------13254112214234389999999985

HHsearch alignment for GI: 254781091 and conserved domain: TIGR00461