>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase; InterPro: IPR004631 4-aminobutyrate aminotransferase eukaryotic (2.6.1.19 from EC) is a class III pyridoxal-phosphate-dependent aminotransferase. The enzyme catalyses the conversion of 4-aminobutanoate and 2-oxoglutarate into succinate semialdehyde and L-glutamate. The degree of sequence difference between this set and known bacterial examples is greater than the distance between either set the most similar enzyme with distinct function, and so the prokaryotic and eukaryotic sets have been placed into separate families. This family describes known eukaryotic examples of the enzyme. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.; GO: 0003867 4-aminobutyrate transaminase activity, 0009448 gamma-aminobutyric acid metabolic process.

Probab=97.84 E-value=5.1e-05 Score=50.14 Aligned_cols=210 Identities=21% Similarity=0.309 Sum_probs=118.1 Q ss_pred CCCHHHHHHHHHHHCCCCCCEEE--EECCCCCCCC----CCCHHHHHHHHCCCCCCCCCCCCCCCC--------CCCCCC Q ss_conf 11023455324431135653265--4034344433----321123565203446533444323365--------544444 Q gi|254781091|r 127 VDIQALTDFLEQRNSTCGIPMIA--VMFVNNETGV----IQPIKEIAQIVKEYQGILVVDAVQAAG--------RIPLSI 192 (383) Q Consensus 127 i~~~~l~~~i~~~t~~~~~~LVs--~~~~~n~tG~----i~pi~~I~~~~~~~g~~~~vD~aqa~g--------~~~id~ 192 (383) T Consensus 238 rCL~~vE~L~~~~~~pkrt-VaA~IvEPIQSEGGDNHAS~~Ff~KLr~i~~k~~v~FivDEVQTGvGaTGklWAHe~W~L 316 (469) T TIGR00699 238 RCLEEVEDLIKKWHKPKRT-VAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHNVAFIVDEVQTGVGATGKLWAHEHWNL 316 (469) T ss_pred HHHHHHHHHHHHCCCCCCE-EEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCCCCC T ss_conf 9999999999731798615-888886243478885343378889999999885956899645508788633123002741 Q ss_pred CCCCCEEEEECCCC-CCCCCCCHHHHCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHH Q ss_conf 33431068730543-3223432011014574201-221224774212222222112221001221100100245653210 Q gi|254781091|r 193 EEIKADFLIISSHK-LGAPVGAGALVFREDILLP-SPLLRGGDQEKGQRAGTENYAVIGGFAVAAQQMVKDIQKRSSRVF 270 (383) Q Consensus 193 ~~~~~D~~~~S~hK-~~GP~G~G~L~~r~~~~~~-~p~~~Gg~~e~~~~~GT~~~~~i~~~~~al~~~~~~~~~~~~~~~ 270 (383) T Consensus 317 ~-~P~D~vtFS--KK~qt---AGyFFH~~~-lrPn~pYr-----~FNTW~GdP~r~l~~~--~i~~eI~~--~~L~~n~~ 380 (469) T TIGR00699 317 D-DPPDMVTFS--KKFQT---AGYFFHDPA-LRPNKPYR-----QFNTWMGDPSRALILR--EIIQEIKR--KDLLNNVA 380 (469) T ss_pred C-CCCCCEEEC--HHHHC---CCCCCCCCC-CCCCCCCC-----CCCCCCCCHHHHHHHH--HHHHHHHH--HHHHHHHH T ss_conf 1-138502204--56412---764236735-68884400-----0354457788999999--88876422--57788899 Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCC-----CCEEEEEECC-CCHHHHHHHHHHCCCEEEECHHHCCCCCCCCHHHHHC Q ss_conf 123333444443210001223221103-----6522898579-9999999998758969987113388643310146762 Q gi|254781091|r 271 AIRDYLEQELKKLIPNIIIYGKDAERI-----SNTCCFSIPF-LKAEVLQIALDLEGIAVSAGSACSSGKIKKNHVLAAM 344 (383) Q Consensus 271 ~L~~~l~~~l~~~~~~~~i~~~~~~~~-----~~i~~~~~~~-~~~~~v~~~l~~~gI~v~~G~~C~~~~~~~~~vl~~~ 344 (383) T Consensus 381 ~~Gd~Ly~GLe~L~~~---YP~~~~nlRGKGrGTFiawD~p~~a~Rd~l~~~~r~~Gvn~G-GcG~~a------------ 444 (469) T TIGR00699 381 AVGDYLYTGLEDLQKK---YPEKVQNLRGKGRGTFIAWDTPDEAKRDKLLLKARLNGVNIG-GCGVKA------------ 444 (469) T ss_pred HHHHHHHHHHHHHHHH---CCHHHHCCCCCCCCCEEECCCCCHHHHHHHHHHHCCCCEEEC-CCCCCC------------ T ss_conf 8767889989999975---013440344676421574049887888999996223825762-653542------------ Q ss_pred CCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHH Q ss_conf 888747659999078889999999999999999 Q gi|254781091|r 345 GFDTSQGAVRVSCGDSTTQEDIDIFLNALQKII 377 (383) Q Consensus 345 g~~~~~g~vRiS~~~~nT~~dId~l~~~L~~iv 377 (383) T Consensus 445 --------iRLRP~LvF~~hHA~ilL~~~~~~~ 469 (469) T TIGR00699 445 --------IRLRPMLVFQKHHADILLEAIEKII 469 (469) T ss_pred --------EECCCCHHHHHHHHHHHHHHHHHCC T ss_conf --------4237530103556899999986309

HHsearch alignment for GI: 254781091 and conserved domain: TIGR00699