HHsearch alignment for GI: 254781091 and conserved domain: TIGR01140

>TIGR01140 CobD L-threonine-O-3-phosphate decarboxylase, putative; InterPro: IPR005860 L-threonine-O-3-phosphate decarboxylase (CobD) was shown to decarboxylate L-threonine O-3-phosphate to yield (R)-1-amino-2-propanol O-2-phosphate, which is the precursor for the linkage between the nucleotide loop and the corrin ring in the biosynthesis of cobalamin . The molecule is a dimer where each subunit consists of a large and small domain . This family contains pyridoxal phosphate-binding class II aminotransferases closely related to histidinol-phosphate aminotransferase (HisC). ; GO: 0003824 catalytic activity, 0009236 cobalamin biosynthetic process.
Probab=99.43  E-value=5.1e-12  Score=92.56  Aligned_cols=314  Identities=22%  Similarity=0.208  Sum_probs=199.6

Q ss_pred             CCCCCC-CC--CCHHHHHHHHHHHH---HCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEECCHHHHHHHHHH
Q ss_conf             215788-89--89899999999996---4288523658999999999999999999729897789886685387644556
Q gi|254781091|r    7 LDWNAT-AP--LLEVVRQSFVKSLD---FYGNPSSVHKEGQKTRLYIEESRRIIADFCGAKPDHVVFTSSATEAANWVLT   80 (383)
Q Consensus         7 lD~aat-tp--~~~~v~~a~~~~~~---~~~n~~s~h~~~~~~~~~~e~aR~~ia~~~g~~~~ei~ft~~~T~a~~~~i~   80 (383)
T Consensus         8 LDFsAninPlgpP~S~~aa~~~aLd~~~rYPD~------------dY~hlrqA~AdH~q~~~dwvl~gnG~~e~i~la~~   75 (349)
T TIGR01140         8 LDFSANINPLGPPASVKAALAAALDALERYPDD------------DYIHLRQALADHHQVAADWVLAGNGELESIRLAAE   75 (349)
T ss_pred             CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCC------------CHHHHHHHHHHHHCCCCCCEECCCCCHHHHHHHHH
T ss_conf             324345788887602045898742787608884------------31899999865412560125459972788899886


Q ss_pred             HHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCC--CC-CC-CCCCH----HHHHHHHHHHCCCCCCEEEEEC
Q ss_conf             54421022456645873332122111222222222222222--22-22-11102----3455324431135653265403
Q gi|254781091|r   81 PHFYQGSHKISIDSLYISAIEHPAVYAGGHFPSHKIHKIPV--LS-KG-IVDIQ----ALTDFLEQRNSTCGIPMIAVMF  152 (383)
Q Consensus        81 ~~~~~~~~~~~~~~ii~s~~eH~s~~~~~~~~~~~v~~v~~--~~-~g-~i~~~----~l~~~i~~~t~~~~~~LVs~~~  152 (383)
T Consensus        76 t~~~------~Gd~~~V~~P~F~eYgR~~~~~Gae~~ti~w~~~~~~~W~~~~dPseiA~l~A~~s~h----~~li-lct  144 (349)
T TIGR01140        76 TLVS------RGDAVLVVAPAFAEYGRELELAGAELKTIRWSLDEADGWRVLRDPSEIALLDAVTSEH----DLLI-LCT  144 (349)
T ss_pred             HCCC------CCCEEEEECCCCHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCHHHHHHHCCCCCCC----CEEE-EEC
T ss_conf             1478------8875787088702679999856981223457731688874557645665412688331----3531-117


Q ss_pred             CCCCCCCCCC---HHHHHHHHCCCCCCCCCCCCCCCCCCC--------CCCCCCCCEEEEECCCCCCCCCCC--HHHHCC
Q ss_conf             4344433321---123565203446533444323365544--------444334310687305433223432--011014
Q gi|254781091|r  153 VNNETGVIQP---IKEIAQIVKEYQGILVVDAVQAAGRIP--------LSIEEIKADFLIISSHKLGAPVGA--GALVFR  219 (383)
Q Consensus       153 ~~n~tG~i~p---i~~I~~~~~~~g~~~~vD~aqa~g~~~--------id~~~~~~D~~~~S~hK~~GP~G~--G~L~~r  219 (383)
T Consensus       145 PnNPtG~l~~r~~l~A~a~rc~~~N~~LllDEA-F~dF~pPG~E~~l~p~l~~~P~~~vlRSLTKfy~lPGLRlGylva~  223 (349)
T TIGR01140       145 PNNPTGDLLERDALRALADRCKAVNIELLLDEA-FLDFLPPGEETSLVPSLKDTPNVVVLRSLTKFYALPGLRLGYLVAV  223 (349)
T ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-HHCCCCCCCCCCCCCHHHCCCCEEEECCHHHHHCCHHHHHHHHHCC
T ss_conf             676989862247899999888874046666556-5157898644343413326897899711155402502445455516


Q ss_pred             CC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf             57-42012212247742122222221122210012211001002456532101233334444432100012232211036
Q gi|254781091|r  220 ED-ILLPSPLLRGGDQEKGQRAGTENYAVIGGFAVAAQQMVKDIQKRSSRVFAIRDYLEQELKKLIPNIIIYGKDAERIS  298 (383)
Q Consensus       220 ~~-~~~~~p~~~Gg~~e~~~~~GT~~~~~i~~~~~al~~~~~~~~~~~~~~~~L~~~l~~~l~~~~~~~~i~~~~~~~~~  298 (383)
T Consensus       224 ~Da~la~~r~--------~r~pW~vnalAaaag~~al~-~sef~q~tw~wl~~erar~~qaL~~l-P~l~v~Ps~an---  290 (349)
T TIGR01140       224 DDALLARLRA--------ARRPWSVNALAAAAGAAALR-DSEFRQETWRWLAEERARLRQALADL-PLLDVYPSRAN---  290 (349)
T ss_pred             CHHHHHHHHH--------HCCCCCCCHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHC-CCCCCCCCCCC---
T ss_conf             6178999997--------42899877689999999876-67899999874366778999999717-88755888876---


Q ss_pred             CEEEEEECCCCHHHHHHHHHHCCCEEEECHHHCCCCCCCCHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf             522898579999999999875896998711338864331014676288874765999907888999999999999999
Q gi|254781091|r  299 NTCCFSIPFLKAEVLQIALDLEGIAVSAGSACSSGKIKKNHVLAAMGFDTSQGAVRVSCGDSTTQEDIDIFLNALQKI  376 (383)
Q Consensus       299 ~i~~~~~~~~~~~~v~~~l~~~gI~v~~G~~C~~~~~~~~~vl~~~g~~~~~g~vRiS~~~~nT~~dId~l~~~L~~i  376 (383)
T Consensus       291 -fLLl~~~~~~~dl~~~llt~~~IliRd---c~~---fp-------gLds--~~~RVAvR---t~a~N~rLlaALa~v  349 (349)
T TIGR01140       291 -FLLLKVEREDVDLQEELLTKERILIRD---CLS---FP-------GLDS--DYYRVAVR---TAAENDRLLAALADV  349 (349)
T ss_pred             -CEEEECCCCCHHHHHHHHHHCCCCHHH---CCC---CC-------CCCC--CEEEEEEC---CHHHHHHHHHHHHCC
T ss_conf             -114545898688999998743410012---057---88-------8887--52788852---855478999996139