HHsearch alignment for GI: 254781091 and conserved domain: TIGR03372
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=99.73 E-value=1.8e-15 Score=113.49 Aligned_cols=335 Identities=17% Similarity=0.182 Sum_probs=181.8
Q ss_pred CEECCCCCC------CCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEECCHHHHHHH
Q ss_conf 001215788------89898999999999964288523658999999999999999999729897789886685387644
Q gi|254781091|r 4 RVYLDWNAT------APLLEVVRQSFVKSLDFYGNPSSVHKEGQKTRLYIEESRRIIADFCGAKPDHVVFTSSATEAANW 77 (383)
Q Consensus 4 ~iYlD~aat------tp~~~~v~~a~~~~~~~~~n~~s~h~~~~~~~~~~e~aR~~ia~~~g~~~~ei~ft~~~T~a~~~ 77 (383)
T Consensus 75 ~~YLD~~sG~~~~~lGH~hp~I~~Ai~~Ql~~~~~~s~~--~---~~~~~~~lae~L~~~~P~~~~~vff~nSGSEAvE~ 149 (442)
T TIGR03372 75 NEFIDCLGGFGIFNVGHRNPNVIAAVENQLAKQPLHSQE--L---LDPLRALLAKTLAALTPGKLKYSFFCNSGTESVEA 149 (442)
T ss_pred CEEEECCHHHHHHHCCCCCHHHHHHHHHHHHHCCCEECC--C---CCHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHH
T ss_conf 998884563885100679899999999997236830144--4---56899999999997478887879863886799999
Q ss_pred HHHHHH-HHCCCCCCCC-EEEECCC-CCCCCCCCCCCCCCC---CCCCCCCCC----CCCCCHHHHHHHHHHHCC-CCCC
Q ss_conf 556544-2102245664-5873332-122111222222222---222222222----211102345532443113-5653
Q gi|254781091|r 78 VLTPHF-YQGSHKISID-SLYISAI-EHPAVYAGGHFPSHK---IHKIPVLSK----GIVDIQALTDFLEQRNST-CGIP 146 (383)
Q Consensus 78 ~i~~~~-~~~~~~~~~~-~ii~s~~-eH~s~~~~~~~~~~~---v~~v~~~~~----g~i~~~~l~~~i~~~t~~-~~~~ 146 (383)
T Consensus 150 AiKlAr~y~~---~~Gk~~ii~~~~syHG~T~ga~s~t~~~~~~~~~~p~~~~~~~~~~~d~~~~~~~~~~~~~~~~~iA 226 (442)
T TIGR03372 150 ALKLAKAYQS---PRGKFTFIAASGAFHGKSLGALSATAKPAFRKPFMPLLPGFHHVAFGDIEAMLKALNECKKTGDDVA 226 (442)
T ss_pred HHHHHHHHHH---CCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHCCCCEE
T ss_conf 9999999732---6898189999167787475703024784335788789998255578999999999998875599789
Q ss_pred EEEEECCCCCCCCCCC----HHHHHHHHCCCCCCCCCCCCCC-CCCC----CCCCCCCCCEEEEECCCC-CCCC-CCCHH
Q ss_conf 2654034344433321----1235652034465334443233-6554----444433431068730543-3223-43201
Q gi|254781091|r 147 MIAVMFVNNETGVIQP----IKEIAQIVKEYQGILVVDAVQA-AGRI----PLSIEEIKADFLIISSHK-LGAP-VGAGA 215 (383)
Q Consensus 147 LVs~~~~~n~tG~i~p----i~~I~~~~~~~g~~~~vD~aqa-~g~~----~id~~~~~~D~~~~S~hK-~~GP-~G~G~ 215 (383)
T Consensus 227 aviiEPiqg~gG~~~p~~~yl~~lr~lc~~~gvllI~DEVqtGfGRTG~~fa~e~~gV~PDIvt~g--KgLggG~~Pi~a 304 (442)
T TIGR03372 227 AIILEPIQGEGGVILPPEGYLPAVRALCDEFGALLILDEVQTGMGRTGKMFACEHEGVQPDILCLA--KALGGGVMPIGA 304 (442)
T ss_pred EEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCHHHHCCCCCCCHHHHH--HHHCCCCCCEEE
T ss_conf 999846777778744999999999999998497032362122798477833765489999768654--541588776268
Q ss_pred HHCCCCCCCC---CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCCC
Q ss_conf 1014574201---22122477421222222211222100122110010024565321012333344444321000-1223
Q gi|254781091|r 216 LVFREDILLP---SPLLRGGDQEKGQRAGTENYAVIGGFAVAAQQMVKDIQKRSSRVFAIRDYLEQELKKLIPNI-IIYG 291 (383)
Q Consensus 216 L~~r~~~~~~---~p~~~Gg~~e~~~~~GT~~~~~i~~~~~al~~~~~~~~~~~~~~~~L~~~l~~~l~~~~~~~-~i~~ 291 (383)
T Consensus 305 v~~~~~i~~~~~~~~~~h~s-----Tf~G--npla~aaalavL~~i~~--~~l~~~~~~~G~~l~~~L~~L~~~~p~~V~ 375 (442)
T TIGR03372 305 TIATEAVFSVLFDNPFLHTT-----TFGG--NPLACAAALATINELLE--KNLPAQAAIKGDFLLDGFQQLAAEYPDLII 375 (442)
T ss_pred EEECHHHHHHHHCCCCCCCC-----CCCC--CHHHHHHHHHHHHHHHH--CCHHHHHHHHHHHHHHHHHHHHHHCCCCEE
T ss_conf 97509998776248975478-----8898--99999999999999986--569999999999999999999876878166
Q ss_pred CCCCCCCCEEEEEEC-CCCHHHHHHHHHHCCCEEEECHHHCCCCCCCCHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHH
Q ss_conf 221103652289857-9999999999875896998711338864331014676288874765999907888999999999
Q gi|254781091|r 292 KDAERISNTCCFSIP-FLKAEVLQIALDLEGIAVSAGSACSSGKIKKNHVLAAMGFDTSQGAVRVSCGDSTTQEDIDIFL 370 (383)
Q Consensus 292 ~~~~~~~~i~~~~~~-~~~~~~v~~~l~~~gI~v~~G~~C~~~~~~~~~vl~~~g~~~~~g~vRiS~~~~nT~~dId~l~ 370 (383)
T Consensus 376 -dVRG~GLm~giE~~~~~~~~~~~~~~~~~gvl~~~~-------------------~~~~~~iri~PPL~it~eeid~~i 435 (442)
T TIGR03372 376 -EARGKGLLMAIEFRDNEIGYAFAKELFQQNILVAGT-------------------LNNAKSIRIEPPLTITIEQCALVI 435 (442)
T ss_pred -EEEECCEEEEEEECCCHHHHHHHHHHHHCCCEEEEC-------------------CCCCCEEEEECCCCCCHHHHHHHH
T ss_conf -856453899999788167999999999789799855-------------------899898999889508999999999
Q ss_pred HHHHHHH
Q ss_conf 9999999
Q gi|254781091|r 371 NALQKII 377 (383)
Q Consensus 371 ~~L~~iv 377 (383)
T Consensus 436 ~~l~~aL 442 (442)
T TIGR03372 436 KAAKDAL 442 (442)
T ss_pred HHHHHHC
T ss_conf 9999869