HHsearch alignment for GI: 254781091 and conserved domain: pfam04864
>pfam04864 Alliinase_C Allinase. Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesized from sulfoxide cysteine derivatives by alliinase (EC:4.4.1.4), whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system.
Probab=98.26 E-value=3.5e-05 Score=51.14 Aligned_cols=290 Identities=13% Similarity=0.138 Sum_probs=137.2
Q ss_pred HHHHHHHHHHHHHHHCC-C--CHHHEEEECCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCC-CCCCCCCCC
Q ss_conf 99999999999999729-8--9778988668538764455654421022456645873332122111222-222222222
Q gi|254781091|r 43 TRLYIEESRRIIADFCG-A--KPDHVVFTSSATEAANWVLTPHFYQGSHKISIDSLYISAIEHPAVYAGG-HFPSHKIHK 118 (383)
Q Consensus 43 ~~~~~e~aR~~ia~~~g-~--~~~ei~ft~~~T~a~~~~i~~~~~~~~~~~~~~~ii~s~~eH~s~~~~~-~~~~~~v~~ 118 (383)
T Consensus 44 ~s~eLe~~Ir~LH~~VGNAvtdgr~iv~GtGsTQL~~Aav~ALs~~~~~~~~p~~VVa~-aPyYs~y~~qT~~~~s~~y~ 122 (363)
T pfam04864 44 LSPELEREIRRLHRAVGNAVTDDRYIVFGTGSTQLLQAAVYALSPNVTPTSPPVKVVAA-VPYYSVYKEQTSYFDSKGYE 122 (363)
T ss_pred CCHHHHHHHHHHHHHHCCCEECCEEEEEECCHHHHHHHHHHHCCCCCCCCCCCCCEEEC-CCCCCCCHHHHHHHCCCCCE
T ss_conf 47999999999998633421066169991788999999998638899987887323556-87664428788884567844
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCC-CCCCCCCCC
Q ss_conf 2222222111023455324431135653265403434443332112356520344653344432336554-444433431
Q gi|254781091|r 119 IPVLSKGIVDIQALTDFLEQRNSTCGIPMIAVMFVNNETGVIQPIKEIAQIVKEYQGILVVDAVQAAGRI-PLSIEEIKA 197 (383)
Q Consensus 119 v~~~~~g~i~~~~l~~~i~~~t~~~~~~LVs~~~~~n~tG~i~pi~~I~~~~~~~g~~~~vD~aqa~g~~-~id~~~~~~ 197 (383)
T Consensus 123 w~Gd------a~~~~~---~~~~~~~IElV--tSPNNPdG~lr~-----aV~~g~~~k~i~D~aYYWPhyTpIt~-~aD~ 185 (363)
T pfam04864 123 WKGN------ASAYVN---TDNPGPFIELV--TSPNNPDGTLRE-----AVIDGSEAKVIHDLAYYWPHYTPITY-PADE 185 (363)
T ss_pred ECCC------HHHHCC---CCCCCCEEEEE--ECCCCCCCHHHH-----HHCCCCCCEEEEEEEEECCCCCCCCC-CCCC
T ss_conf 6346------898367---99988728998--389998401336-----65069984188752000666667677-7767
Q ss_pred EEEEECCCCCCCCCC--CHHHHCCCCCC-CCC-CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHH------HHHHH
Q ss_conf 068730543322343--20110145742-012-212247742122222221122210012211001002------45653
Q gi|254781091|r 198 DFLIISSHKLGAPVG--AGALVFREDIL-LPS-PLLRGGDQEKGQRAGTENYAVIGGFAVAAQQMVKDI------QKRSS 267 (383)
Q Consensus 198 D~~~~S~hK~~GP~G--~G~L~~r~~~~-~~~-p~~~Gg~~e~~~~~GT~~~~~i~~~~~al~~~~~~~------~~~~~ 267 (383)
T Consensus 186 DIMLFTlSK~TGHAGsRiGWALVKD~~VakkM~~y~~-----lN-t~GvS~dSQlRa-~kiLkvv~~~~~~~~~~~~iF~ 258 (363)
T pfam04864 186 DIMLFTMSKYTGHAGSRFGWALVKDEEVAKKMVEYIE-----LN-TIGVSKESQLRT-LKILKVVLATCKTESGTMGFFD 258 (363)
T ss_pred CEEEEEECCCCCCCCCCEEEEEECCHHHHHHHHHHHH-----HC-CCCCCHHHHHHH-HHHHHHHHHHHCCCCCCHHHHH
T ss_conf 6798986122367625234788637999999999976-----50-530688999999-9999999976326766235789
Q ss_pred HH-HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEE--------------EECCCCHHHHHHHHHHCCCEEEECHHHCC
Q ss_conf 21-0123333444443210001223221103652289--------------85799999999998758969987113388
Q gi|254781091|r 268 RV-FAIRDYLEQELKKLIPNIIIYGKDAERISNTCCF--------------SIPFLKAEVLQIALDLEGIAVSAGSACSS 332 (383)
Q Consensus 268 ~~-~~L~~~l~~~l~~~~~~~~i~~~~~~~~~~i~~~--------------~~~~~~~~~v~~~l~~~gI~v~~G~~C~~ 332 (383)
T Consensus 259 fg~~~m~~RW-~~L~~~v~~S~~FsL~~-~~p~yC~ff~~~~~~sPafaWlkCe~eed~DC~~~L~~~~I~~r~G~~Fga 336 (363)
T pfam04864 259 FGYQTMRERW-ERLRELVSSSTRFSLQK-LPPEYCNYFKKIREPSPAYAWLKCEWEEDTDCYEVLREGKILTRSGERFGA 336 (363)
T ss_pred HHHHHHHHHH-HHHHHHHHHCCEEECCC-CCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHCCEECCCCCCCCC
T ss_conf 9999999999-99999971158077267-787766542321689986379972663201799999878864568764588
Q ss_pred CCCCCCHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHH
Q ss_conf 643310146762888747659999078889999999999999999
Q gi|254781091|r 333 GKIKKNHVLAAMGFDTSQGAVRVSCGDSTTQEDIDIFLNALQKII 377 (383)
Q Consensus 333 ~~~~~~~vl~~~g~~~~~g~vRiS~~~~nT~~dId~l~~~L~~iv 377 (383)
T Consensus 337 ----------------~~~YVRlSll--~~~d~Fd~lleRL~~lV 363 (363)
T pfam04864 337 ----------------DSRYVRLSLI--KTQDDFDQLLQRLKSLV 363 (363)
T ss_pred ----------------CCCEEEEEEE--CCHHHHHHHHHHHHHHC
T ss_conf ----------------9876999840--68878999999998549