RPSBLAST alignment for GI: 254781091 and conserved domain: TIGR01979
>gnl|CDD|131034 TIGR01979, sufS, cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved. Length = 403
Score = 161 bits (410), Expect = 3e-40
Identities = 104/406 (25%), Positives = 171/406 (42%), Gaps = 57/406 (14%)
Query: 5 VYLDWNATA----PLLEVVRQSFVKSLDFYGNPS-SVHKEGQKTRLYIEESRRIIADFCG 59
VYLD AT+ +++ V + + S N +H + E R +A F
Sbjct: 20 VYLDSAATSQKPQQVIDAVAEYYRNS---NANVHRGIHTLSVRATEAYEAVREKVAKFIN 76
Query: 60 AKPDH-VVFTSSATEAANWVLT----PHFYQGSHKISIDSLYISAIEHPAVYAGGHFPSH 114
A D +VFT TE+ N V + G D + IS +EH A +
Sbjct: 77 AASDEEIVFTRGTTESINLVAYSWGDSNLKAG------DEIVISEMEHHANIVPWQLLAE 130
Query: 115 ----KIHKIPVLSKGIVDIQALTDFLEQRNSTCGIPMIAVMFVNNETGVIQPIKEIAQIV 170
+ IP+ G +D+ L L ++ ++A+ V+N G + P++EIA++
Sbjct: 131 RTGATLKFIPLDDDGTLDLDDLEKLLTEK-----TKLVAITHVSNVLGTVNPVEEIAKLA 185
Query: 171 KEYQGILVVDAVQAAGRIPLSIEEIKADFLIISSHKLGAPVGAGALVFREDIL--LPSPL 228
+ ++VD QA +P+ ++ + DF + S HK+ P G G L +E++L +P P
Sbjct: 186 HQVGAKVLVDGAQAVPHMPVDVQALDCDFYVFSGHKMYGPTGIGVLYGKEELLEQMP-PF 244
Query: 229 LRGGD------------QEKGQR--AGTENYAVIGGFAVAAQQMVK-DIQKRSSRVFAIR 273
L GG+ E + AGT N A + G A + ++ + +
Sbjct: 245 LGGGEMIAEVSFEETTYNEAPHKFEAGTPNIAGVIGLGAAIDYLEAIGLENIEAHEHELT 304
Query: 274 DYLEQELKKLIPNIIIYG-KDAERISNTCCFSIPFLKAEVLQIALDLEGIAVSAGSACSS 332
Y + L + IP + IYG +DAE F++ + + LD EGIAV +G C+
Sbjct: 305 AYALERLGE-IPGLRIYGPRDAEDRGGIISFNVEGVHPHDVGTILDEEGIAVRSGHHCA- 362
Query: 333 GKIKKNHVLAAMGFDTSQGAVRVSCGDSTTQEDIDIFLNALQKIIR 378
M R S T+EDID + AL+K+ +
Sbjct: 363 --------QPLMRRFGVPATCRASFYIYNTEEDIDALVEALKKVRK 400