RPSBLAST alignment for GI: 254781091 and conserved domain: TIGR03403

>gnl|CDD|132444 TIGR03403, nifS_epsilon, cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation. Length = 382
 Score =  220 bits (562), Expect = 5e-58
 Identities = 129/385 (33%), Positives = 206/385 (53%), Gaps = 22/385 (5%)

Query: 5   VYLDWNATA---PLLEVVRQSFVKSLDFYGNPSSVHKEGQKTRLYIEES-RRIIADFCGA 60
           VYLD NAT    P ++ +   F    D YGNP+S+H+ G  T   I E+  ++       
Sbjct: 1   VYLDNNATTMLDPKVKELMDPFFC--DIYGNPNSLHQFGTATHPAIAEALDKLYKGINAR 58

Query: 61  KPDHVVFTSSATEAANWVLTPHFYQGSHKISIDSLYISAIEHPAVYAGGHFPSH---KIH 117
             D ++ TS ATE+ NWVL   ++    K   + +  + +EHPAV A   F      ++ 
Sbjct: 59  DLDDIIITSCATESNNWVLKGVYFDEILKGGKNHIITTEVEHPAVRATCAFLESLGVEVT 118

Query: 118 KIPVLSKGIVDIQALTDFLEQRNSTCGIPMIAVMFVNNETGVIQPIKEIAQIVKEYQGIL 177
            +P+  +G +  + + + + ++ +     +++VM+ NNETG+I PIKEI +I KE   + 
Sbjct: 119 YLPINEQGTITAEQVREAITEKTA-----LVSVMWANNETGMIFPIKEIGEICKERGVLF 173

Query: 178 VVDAVQAAGRIPLSIEEIKADFLIISSHKLGAPVGAGALVFREDILLPSPLLRGGDQEKG 237
             DAVQA G+IP+ +++   DFL  S+HK   P G G L  R+ + L +PL  GG+   G
Sbjct: 174 HTDAVQAIGKIPVDVQKAGVDFLSFSAHKFHGPKGVGGLYIRKGVEL-TPLFHGGEHMGG 232

Query: 238 QRAGTENYAVIGGFAVAAQQMVKDIQKRSSRVFAIRDYLEQELKKLIPNIIIYGKDAERI 297
           +R+GT N   I     A +   + +    S V  +RD LE  L +L P++ + G    R+
Sbjct: 233 RRSGTLNVPYIVAMGEAMRLANEYLDFEKSHVRRLRDRLEDALLEL-PDVFVVGDREHRV 291

Query: 298 SNTCCFSIPFLKAEVLQIALDLEGIAVSAGSACSSGKIKKNHVLAAMGFDT--SQGAVRV 355
            NT   SI  ++ E +   L+  GIA S GSAC+S  ++ N V+ A+G D   +  A+R+
Sbjct: 292 PNTILISIKGVEGEAMLWDLNKAGIAASTGSACASEDLEANPVMVAIGADKELAHTAIRL 351

Query: 356 SCGDSTTQEDID----IFLNALQKI 376
           S    TT+E+ID    +F  A+Q++
Sbjct: 352 SLSRFTTEEEIDYTIEVFKKAVQRL 376