HHsearch alignment for GI: 254781093 and conserved domain: COG3243
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism].
Probab=98.48 E-value=7.3e-06 Score=55.32 Aligned_cols=185 Identities=18% Similarity=0.191 Sum_probs=111.6
Q ss_pred CCCCC-CCCEEEEECCCCC-C---CCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 68887-7879999578998-8---88998999999999999739849998531558876778521023899999899998
Q gi|254781093|r 19 PSTNP-NAPIALILHPHPR-F---GGTMNDNIVYQLFYLFQQRGFVSLRFNFRGIGRSEGEFDYGDGELSDAAAALDWVQ 93 (225)
Q Consensus 19 ~~~~~-~~~~vv~~Hp~p~-~---GG~~~~~~~~~la~~l~~~G~~vl~fd~RG~G~S~G~~~~g~~E~~D~~aa~~~l~ 93 (225)
T Consensus 100 P~te~v~~~PlLiVpP~iNk~yI~DL~~~~----s~V~~l~~~g~~vfvIsw~nPd~~~~~~~~edYi~e~l~~aid~V~ 175 (445)
T COG3243 100 PLTEKVLKRPLLIVPPWINKFYILDLSPEK----SLVRWLLEQGLDVFVISWRNPDASLAAKNLEDYILEGLSEAIDTVK 175 (445)
T ss_pred CCCCCCCCCCEEEECCCCCCEEEEECCCCC----HHHHHHHHCCCCEEEEECCCCHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_conf 787756788448634433752478678774----0899999759836899615860765534699999999999999999
Q ss_pred HHCCCCCCEEEEEECHHHHHHHHHHHCCC--CHHEEEECCCCCCCCC---------------------------------
Q ss_conf 62354674058887203687876450386--2133012275744333---------------------------------
Q gi|254781093|r 94 SLNPESKSCWIAGYSFGAWISMQLLMRRP--EINGFISVAPQPKSYD--------------------------------- 138 (225)
Q Consensus 94 ~~~~~~~~i~l~G~S~Gg~val~~a~~~p--~i~~~v~isp~~~~~~--------------------------------- 138 (225)
T Consensus 176 ~itg-~~dInliGyC~GGt~~~~a~a~~~~~~I~S~T~~ts~~Df~~~g~l~~f~~~~~~~~~~~~~~~~g~ipg~~ma~ 254 (445)
T COG3243 176 DITG-QKDINLIGYCVGGTLLAAALALMAAKRIKSLTLLTSPVDFSHAGDLGIFANEATIEALDADIVQKGILPGWYMAI 254 (445)
T ss_pred HHHC-CCCCCEEEECCCHHHHHHHHHHHHHCCCCEEEEEECCHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHH
T ss_conf 8747-651235546145699999999744312244677732010035751001268789999986422216788089999
Q ss_pred ---------------------------C-----------------------------------------CCCCCCCCCEE
Q ss_conf ---------------------------2-----------------------------------------22343347737
Q gi|254781093|r 139 ---------------------------F-----------------------------------------SFLAPCPSSGL 150 (225)
Q Consensus 139 ---------------------------~-----------------------------------------~~l~~~~~p~L 150 (225)
T Consensus 255 ~F~mLrp~dliw~~fV~nyl~ge~pl~fdllyWn~Dst~~~~~~~~~~Lrn~y~~N~L~~g~~~v~G~~VdL~~It~pvy 334 (445)
T COG3243 255 VFFLLRPNDLIWNYFVNNYLDGEQPLPFDLLYWNADSTRLPGAAHSEYLRNFYLENRLIRGGLEVSGTMVDLGDITCPVY 334 (445)
T ss_pred HHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHCHHHCCCEEECCEEECHHHCCCCEE
T ss_conf 99863931101688898861788887236788607786576689999999999737443065488888942232664238
Q ss_pred EEECCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCC--CCCC-----HHH---HHHHHHHHHHHHCCC
Q ss_conf 76168655028999999999986077996079997879847--5585-----899---999999999973122
Q gi|254781093|r 151 IINGSNDTVATTSDVKDLVNKLMNQKGISITHKVIPDANHF--FIGK-----VDE---LINECAHYLDNSLDE 213 (225)
Q Consensus 151 iIhG~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~i~ga~H~--f~~~-----~~~---l~~~i~~fl~~~L~~ 213 (225)
T Consensus 335 ~~a~~~DhIaP~~Sv~~g~~l~~---g-~~~f~l~-~sGHIa~vVN~p~~~k~~~w~n~~~~~~~Wl~~a~~~ 402 (445)
T COG3243 335 NLAAEEDHIAPWSSVYLGARLLG---G-EVTFVLS-RSGHIAGVVNPPGNAKYQYWTNLPADAEAWLSGAKEH 402 (445)
T ss_pred EEECCCCCCCCHHHHHHHHHHCC---C-CEEEEEE-CCCEEEEEECCCCHHHHHCCCCCCCCHHHHHHHCCCC
T ss_conf 86303465566898988987549---9-6499983-6860788857823566634689832099999861558