HHsearch alignment for GI: 254781093 and conserved domain: COG3509
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism].
Probab=99.22 E-value=1.1e-10 Score=84.27 Aligned_cols=199 Identities=16% Similarity=0.160 Sum_probs=120.7
Q ss_pred EECCCCCEEEEEEECCCCC--CCCEEEEECCCCCCCCCCCCHH-HH---HHHHHHHHCCCEEEEEE-ECCCC------CC
Q ss_conf 9658996187999668887--7879999578998888998999-99---99999997398499985-31558------87
Q gi|254781093|r 5 VFNGPSGRLEGRYQPSTNP--NAPIALILHPHPRFGGTMNDNI-VY---QLFYLFQQRGFVSLRFN-FRGIG------RS 71 (225)
Q Consensus 5 ~i~g~~G~l~~~~~~~~~~--~~~~vv~~Hp~p~~GG~~~~~~-~~---~la~~l~~~G~~vl~fd-~RG~G------~S 71 (225)
T Consensus 39 s~~~~g~~r~y~l~vP~g~~~~apLvv~LH------G~~~sgag~~~~sg~d~lAd~~gFlV~yPdg~~~~wn~~~~~~~ 112 (312)
T COG3509 39 SFDVNGLKRSYRLYVPPGLPSGAPLVVVLH------GSGGSGAGQLHGTGWDALADREGFLVAYPDGYDRAWNANGCGNW 112 (312)
T ss_pred CCCCCCCCCCEEEECCCCCCCCCCEEEEEE------CCCCCHHHHHCCCCHHHHHCCCCCEEECCCCCCCCCCCCCCCCC
T ss_conf 411278753168971898899987799983------68887678641355565524158679776766655688756556
Q ss_pred CCCC--CCCCHHHHHHHHHHHHHHHH-CCCCCCEEEEEECHHHHHHHHHHHCCCCHHEEEEC-CCCCCCCCC--------
Q ss_conf 6778--52102389999989999862-35467405888720368787645038621330122-757443332--------
Q gi|254781093|r 72 EGEF--DYGDGELSDAAAALDWVQSL-NPESKSCWIAGYSFGAWISMQLLMRRPEINGFISV-APQPKSYDF-------- 139 (225)
Q Consensus 72 ~G~~--~~g~~E~~D~~aa~~~l~~~-~~~~~~i~l~G~S~Gg~val~~a~~~p~i~~~v~i-sp~~~~~~~-------- 139 (225)
T Consensus 113 ~~p~~~~~g~ddVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VAg~~~-~~~a~~~~rp~ 191 (312)
T COG3509 113 FGPADRRRGVDDVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPVAGLLA-LGVACTPPRPV 191 (312)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHCCCCCCCCEEEEECCCC-CCCCCCCCCCH
T ss_conf 88664447850788999999998774076742279982075789999987407543112013304567-77556899725
Q ss_pred ---------CCCCCC-CCCEEEEECCCCCCCCHHHHHHHHHHHHHC----------------------CCCCEEEEEECC
Q ss_conf ---------223433-477377616865502899999999998607----------------------799607999787
Q gi|254781093|r 140 ---------SFLAPC-PSSGLIINGSNDTVATTSDVKDLVNKLMNQ----------------------KGISITHKVIPD 187 (225)
Q Consensus 140 ---------~~l~~~-~~p~LiIhG~~D~~vp~~~~~~~~~~l~~~----------------------~~~~~~~~~i~g 187 (225)
T Consensus 192 ~~m~~~G~~Dp~~p~~gG~~~~g~g~~~~~v~~~~~~~~Waa~ng~~~~p~~~~~~~~~~~~~~~~~~~~~~V~~y~i~g 271 (312)
T COG3509 192 SVMAFHGTADPLNPYHGGGVPIGRGQRDGVVSAADLAARWAAVNGCQAGPDTAELPDVGDGTDYDTCDGNARVELYTIDG 271 (312)
T ss_pred HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCCCEEEEEEEC
T ss_conf 68973588998888879986646343466436899999999854888897543157776562321147985268999807
Q ss_pred CCCCCCCCHH-------------HHHHHHHHHHHHH
Q ss_conf 9847558589-------------9999999999973
Q gi|254781093|r 188 ANHFFIGKVD-------------ELINECAHYLDNS 210 (225)
Q Consensus 188 a~H~f~~~~~-------------~l~~~i~~fl~~~ 210 (225)
T Consensus 272 ~GH~wp~~~~~~~~~~g~~t~~~dat~~iw~Ff~~~ 307 (312)
T COG3509 272 GGHTWPGGTQYGPAALGMSTRGFDATERIWRFFRQH 307 (312)
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHC
T ss_conf 865575777777655443345755099999999852