HHsearch alignment for GI: 254781093 and conserved domain: KOG4840
>KOG4840 consensus.
Probab=98.06 E-value=0.0001 Score=48.41 Aligned_cols=167 Identities=16% Similarity=0.137 Sum_probs=101.3
Q ss_pred HHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHHHHHC--C
Q ss_conf 99999999999739849998531558876778521023899999899998623546740588872036878764503--8
Q gi|254781093|r 44 NIVYQLFYLFQQRGFVSLRFNFRGIGRSEGEFDYGDGELSDAAAALDWVQSLNPESKSCWIAGYSFGAWISMQLLMR--R 121 (225)
Q Consensus 44 ~~~~~la~~l~~~G~~vl~fd~RG~G~S~G~~~~g~~E~~D~~aa~~~l~~~~~~~~~i~l~G~S~Gg~val~~a~~--~ 121 (225)
T Consensus 53 ~y~~~L~~~lde~~wslVq~q~~Ssy~G~Gt~sl-k~D~edl~~l~~Hi~~~~fS-t~vVL~GhSTGcQdi~yYlTnt~~ 130 (299)
T KOG4840 53 LYTTMLNRYLDENSWSLVQPQLRSSYNGYGTFSL-KDDVEDLKCLLEHIQLCGFS-TDVVLVGHSTGCQDIMYYLTNTTK 130 (299)
T ss_pred CCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCC-CCCHHHHHHHHHHHHCCCCC-CCEEEEECCCCCHHHHHHHHHCCC
T ss_conf 4288998888643643664001056566565010-23589999999986215765-664997157660579999874222
Q ss_pred C-CHHEEEECCCCCCCC-CC--------------------------------------------------------CCC-
Q ss_conf 6-213301227574433-32--------------------------------------------------------223-
Q gi|254781093|r 122 P-EINGFISVAPQPKSY-DF--------------------------------------------------------SFL- 142 (225)
Q Consensus 122 p-~i~~~v~isp~~~~~-~~--------------------------------------------------------~~l- 142 (225)
T Consensus 131 ~r~iraaIlqApVSDrEYqf~~~~etk~l~d~l~a~~~~~grgedv~pR~~~~~~p~sa~R~~dl~~~~G~dDmFSSdLS 210 (299)
T KOG4840 131 DRKIRAAILQAPVSDREYQFLEEHETKDLSDLLRAAKETIGRGEDVAPRYGGGSQPLSARRALDLFSRYGKDDMFSSDLS 210 (299)
T ss_pred HHHHHHHHHHCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHCCCC
T ss_conf 38899998727652155550266345789999999876522354235345888766647788889987187420001232
Q ss_pred -----------CCCCCCEEEEECCCCCCCCHHHHH-HHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf -----------433477377616865502899999-99999860779960799978798475585899999999999973
Q gi|254781093|r 143 -----------APCPSSGLIINGSNDTVATTSDVK-DLVNKLMNQKGISITHKVIPDANHFFIGKVDELINECAHYLDNS 210 (225)
Q Consensus 143 -----------~~~~~p~LiIhG~~D~~vp~~~~~-~~~~~l~~~~~~~~~~~~i~ga~H~f~~~~~~l~~~i~~fl~~~ 210 (225)
T Consensus 211 ~D~f~~~lg~gsta~~qiif~ms~rDEyv~~~~dkk~llnR~s~~~r~~e~~~~ls-g~~~~~n~~~~~sqei~k~i~~~ 289 (299)
T KOG4840 211 EDRFYMELGEGSTAGAQIIFVMSGRDEYVKADIDKKLLLNRNSRVERIPEGTHVLS-GAEDVENFLGFLSQEIEKAIGQK 289 (299)
T ss_pred HHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCC-CCCCHHHHHHHHHHHHHHHHHHC
T ss_conf 66899985467887756999943765446731578999876534206775541012-66417654013059999999843
Q ss_pred CCC
Q ss_conf 122
Q gi|254781093|r 211 LDE 213 (225)
Q Consensus 211 L~~ 213 (225)
T Consensus 290 ~~s 292 (299)
T KOG4840 290 AQS 292 (299)
T ss_pred CCC
T ss_conf 788