HHsearch alignment for GI: 254781093 and conserved domain: PRK05077
>PRK05077 frsA fermentation/respiration switch protein; Reviewed.
Probab=99.42 E-value=1.1e-11 Score=90.29 Aligned_cols=191 Identities=21% Similarity=0.370 Sum_probs=132.3
Q ss_pred CEEEECCCCC-EEEEEEECCC-CCCCCEEEEECCCCCCCCCCCCH--HHHHHHH-HHHHCCCEEEEEEECCCCCCCCCCC
Q ss_conf 7089658996-1879996688-87787999957899888899899--9999999-9997398499985315588767785
Q gi|254781093|r 2 PEVVFNGPSG-RLEGRYQPST-NPNAPIALILHPHPRFGGTMNDN--IVYQLFY-LFQQRGFVSLRFNFRGIGRSEGEFD 76 (225)
Q Consensus 2 ~~v~i~g~~G-~l~~~~~~~~-~~~~~~vv~~Hp~p~~GG~~~~~--~~~~la~-~l~~~G~~vl~fd~RG~G~S~G~~~ 76 (225)
T Consensus 169 k~i~f~~~~G~~i~gfLHLP~~~~p~PtViv~-------GgLDsLQ~D~~rLF~dylaP~giAMLTlDMPSvG~Ss~-w~ 240 (414)
T PRK05077 169 KELEFPVPGGKPITGFLHLPKGDGPFPTVLMC-------GGLDSLQTDYYRLFRDYLAPRGIAMLTIDMPSVGFSSK-WK 240 (414)
T ss_pred EEEEEEECCCCEEEEEEECCCCCCCCCEEEEE-------CCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCC-CC
T ss_conf 37888726996578998469999988759995-------67247788899999985264673379703787765363-54
Q ss_pred CCCHHHHHH----HHHHHHHHHHC-CCCCCEEEEEECHHHHHHHHHHHCCC-CHHEEEECCCCCCCCC------------
Q ss_conf 210238999----99899998623-54674058887203687876450386-2133012275744333------------
Q gi|254781093|r 77 YGDGELSDA----AAALDWVQSLN-PESKSCWIAGYSFGAWISMQLLMRRP-EINGFISVAPQPKSYD------------ 138 (225)
Q Consensus 77 ~g~~E~~D~----~aa~~~l~~~~-~~~~~i~l~G~S~Gg~val~~a~~~p-~i~~~v~isp~~~~~~------------ 138 (225)
T Consensus 241 ----LtqDsS~LHQaVL~~L~~vPWVDh~Rv~~~GfRFG~NvAvRLayLEp~rlKavv~lG~~VH~~~~~~~~~~~~P~M 316 (414)
T PRK05077 241 ----LTQDSSLLHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEPPRLKAVACLGPVVHALLSDPDRQQQVPEM 316 (414)
T ss_pred ----CCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECHHHHHHHHHHCCCCEEEEEEECHHHHHHHCCHHHHHHCCHH
T ss_conf ----4430679999999855689863230356776420206999998626200126887262888883688888768789
Q ss_pred -------------------------C-----CCC-CCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECC
Q ss_conf -------------------------2-----223-433477377616865502899999999998607799607999787
Q gi|254781093|r 139 -------------------------F-----SFL-APCPSSGLIINGSNDTVATTSDVKDLVNKLMNQKGISITHKVIPD 187 (225)
Q Consensus 139 -------------------------~-----~~l-~~~~~p~LiIhG~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~i~g 187 (225)
T Consensus 317 ylDvlASRLg~~~~~~~~L~~~l~~~SLK~QGlLgRr~~vPmLa~~~k~Dp~sP~~d~~Lia~--sS~~Gk---~~~i~- 390 (414)
T PRK05077 317 YLDVLASRLGMHDASDEALRVELNRYSLKVQGLLGRRCPTPMLSGYWKNDPFSPEEDSRLIAS--SSADGK---LLEIP- 390 (414)
T ss_pred HHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHH--HCCCCC---EEECC-
T ss_conf 999999874643388899987763300765022568789762440258999798688999997--445884---56447-
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHC
Q ss_conf 984755858999999999999731
Q gi|254781093|r 188 ANHFFIGKVDELINECAHYLDNSL 211 (225)
Q Consensus 188 a~H~f~~~~~~l~~~i~~fl~~~L 211 (225)
T Consensus 391 ~~pv~~~~-~~aL~~~~~Wl~~~l 413 (414)
T PRK05077 391 FKPVYRNF-DKALQEIIDWLEDKL 413 (414)
T ss_pred CCCHHHHH-HHHHHHHHHHHHHHC
T ss_conf 86346679-999999999998643