>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I; InterPro: IPR010963 This entry represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerises hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of the cell.; GO: 0008415 acyltransferase activity, 0042619 poly-hydroxybutyrate biosynthetic process, 0005737 cytoplasm.

Probab=96.68 E-value=0.03 Score=33.53 Aligned_cols=157 Identities=16% Similarity=0.191 Sum_probs=95.8 Q ss_pred HHHHHHHHCCCEEEEEEECCCCCCCCC--CCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECHHHH-----HHHHHHHC Q ss_conf 999999973984999853155887677--85210238999998999986235467405888720368-----78764503 Q gi|254781093|r 48 QLFYLFQQRGFVSLRFNFRGIGRSEGE--FDYGDGELSDAAAALDWVQSLNPESKSCWIAGYSFGAW-----ISMQLLMR 120 (225) Q Consensus 48 ~la~~l~~~G~~vl~fd~RG~G~S~G~--~~~g~~E~~D~~aa~~~l~~~~~~~~~i~l~G~S~Gg~-----val~~a~~ 120 (225) T Consensus 211 SlvrWlv~QG~TVF~~SWrNPd~~~A~~tfdD--Y~~~G~~~Al~~v~~it-Ge~~~N~~GYCIGGT~Ls~alA~lAArg 287 (541) T TIGR01838 211 SLVRWLVEQGHTVFLISWRNPDAEQADLTFDD--YVRDGVIAALEVVEEIT-GEKQVNAVGYCIGGTLLSTALAYLAARG 287 (541) T ss_pred HHHHHHHHCCCCEEEEEECCCCHHHHHCCHHH--HHHHHHHHHHHHHHHHC-CCEEEEEEEEEHHHHHHHHHHHHHHHCC T ss_conf 58999995499389986006275645367478--99999999999998615-5406504541044789999999999617 Q ss_pred -CCCHHEEEEC-------------------------------CCCCCCC------------------------------- Q ss_conf -8621330122-------------------------------7574433------------------------------- Q gi|254781093|r 121 -RPEINGFISV-------------------------------APQPKSY------------------------------- 137 (225) Q Consensus 121 -~p~i~~~v~i-------------------------------sp~~~~~------------------------------- 137 (225) T Consensus 288 ~~~ri~SaTffTTllDF~~~G~l~~F~~E~~v~~iE~~~~~~GGP~~~l~G~~la~TFSlLR~NdL~WnY~vdnYLKG~~ 367 (541) T TIGR01838 288 EKKRIKSATFFTTLLDFSDPGELGVFVDEEIVSAIERQNNQKGGPIAYLDGRSLAVTFSLLRENDLIWNYYVDNYLKGKS 367 (541) T ss_pred CCCCHHHHHHHHHHHCHHCCCCCCEEECCHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHCCCCCEEECCCCCCCCCCCC T ss_conf 89612458899998431027853112380899999998413789567506056888873124687020663043146775 Q ss_pred --CC------------------------------------------CCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHH Q ss_conf --32------------------------------------------2234334773776168655028999999999986 Q gi|254781093|r 138 --DF------------------------------------------SFLAPCPSSGLIINGSNDTVATTSDVKDLVNKLM 173 (225) Q Consensus 138 --~~------------------------------------------~~l~~~~~p~LiIhG~~D~~vp~~~~~~~~~~l~ 173 (225) T Consensus 368 P~pFDLLfWN~DsTN~Pg~~h~~yLR~lYl~N~L~~~g~l~~~G~~lDL~~vk~P~y~~at~eDHIApW~~~y~G~~~lG 447 (541) T TIGR01838 368 PVPFDLLFWNSDSTNLPGKMHNFYLRNLYLQNELVSKGKLEVGGVRLDLSKVKVPVYIIATKEDHIAPWQSAYRGAALLG 447 (541) T ss_pred CCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCEEEECCCCCCCEEEEECCCCCCCCCHHHHHHHHHHC T ss_conf 78600121155011004778989987530101111688548732462034243124576134443458279999998853 Q ss_pred -HCCCCCEEEEEECCCCC--------------CCCCCHHHHHHHHHHHHHHHCC Q ss_conf -07799607999787984--------------7558589999999999997312 Q gi|254781093|r 174 -NQKGISITHKVIPDANH--------------FFIGKVDELINECAHYLDNSLD 212 (225) Q Consensus 174 -~~~~~~~~~~~i~ga~H--------------~f~~~~~~l~~~i~~fl~~~L~ 212 (225) T Consensus 448 sG----~~rFv-LgeSGHIAGvvNPP~k~KY~~WTn~N~~~~~~~~~Wl~gA~~ 496 (541) T TIGR01838 448 SG----EKRFV-LGESGHIAGVVNPPSKNKYGYWTNANDALPEDPEQWLAGAEE 496 (541) T ss_pred CC----CCEEE-ECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHCCEE T ss_conf 89----83488-526650500467887777753127766878897889751860

HHsearch alignment for GI: 254781093 and conserved domain: TIGR01838