HHsearch alignment for GI: 254781093 and conserved domain: pfam09752
>pfam09752 DUF2048 Uncharacterized conserved protein (DUF2048). The proteins in this family are conserved from plants to vertebrates. The function is unknown.
Probab=99.05 E-value=3.2e-08 Score=69.47 Aligned_cols=173 Identities=18% Similarity=0.320 Sum_probs=105.3
Q ss_pred CCCCEEEEECCCCCCCCCCCCHHH--HHHHHHHHHCCCEEEEEE--ECCCCCCCCCCC-----------CCCHHHHHHHH
Q ss_conf 778799995789988889989999--999999997398499985--315588767785-----------21023899999
Q gi|254781093|r 23 PNAPIALILHPHPRFGGTMNDNIV--YQLFYLFQQRGFVSLRFN--FRGIGRSEGEFD-----------YGDGELSDAAA 87 (225)
Q Consensus 23 ~~~~~vv~~Hp~p~~GG~~~~~~~--~~la~~l~~~G~~vl~fd--~RG~G~S~G~~~-----------~g~~E~~D~~a 87 (225)
T Consensus 89 ~~~~vcihLa------gTGD~~f~rR~~~a~pLlk~gi~siile~pyYG~RkP~~Q~~~~l~~VsDl~~mg~~~i~E~~~ 162 (337)
T pfam09752 89 PKRPVCVHLA------GTGDHGFWRRRRLARPLLKEGIGSIILENPFYGLRRPKGQRRSSLRNVSDLFLMGAATILESRA 162 (337)
T ss_pred CCCCEEEEEC------CCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 8885499847------8675117889887788986484068861564446698431125221187999977789999999
Q ss_pred HHHHHHHHCCCCCCEEEEEECHHHHHHHHHHHCCCCHHEEE-ECCC--CCCCC-----------C---------------
Q ss_conf 89999862354674058887203687876450386213301-2275--74433-----------3---------------
Q gi|254781093|r 88 ALDWVQSLNPESKSCWIAGYSFGAWISMQLLMRRPEINGFI-SVAP--QPKSY-----------D--------------- 138 (225)
Q Consensus 88 a~~~l~~~~~~~~~i~l~G~S~Gg~val~~a~~~p~i~~~v-~isp--~~~~~-----------~--------------- 138 (225)
T Consensus 163 Ll~w~~~~g~--g~~g~tG~SmGG~mAalaas~~p~Pia~vPclswsSAs~vfteGvLs~~i~W~~L~~q~~~~~~~~~~ 240 (337)
T pfam09752 163 LLHWLEREGY--GPLGVTGLSMGGHMAALAASNWPKPLAVVPCLAWSSASSVFTEGVLSHSIAWDALEKQIRDLAAQVES 240 (337)
T ss_pred HHHHHHHCCC--CCCEEEEECCCHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHCCCCCCHHHHHCHHHCCHHHHHH
T ss_conf 9999997288--86136642331277776640589873120220467773043110203666778872422011001112
Q ss_pred -------------------------CCCCCCC-----CCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCC
Q ss_conf -------------------------2223433-----4773776168655028999999999986077996079997879
Q gi|254781093|r 139 -------------------------FSFLAPC-----PSSGLIINGSNDTVATTSDVKDLVNKLMNQKGISITHKVIPDA 188 (225)
Q Consensus 139 -------------------------~~~l~~~-----~~p~LiIhG~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~i~ga 188 (225)
T Consensus 241 ~~~~~~~~~~~~~E~~~~m~g~mds~Thl~nf~~P~dp~lii~V~A~~D~YVPR~~v~~Lq~iWP---g--~EiR~l~g- 314 (337)
T pfam09752 241 DKLDGAKERGADKEAAREMLGLMDSLTSLTNFPVPKDPSAAIFVAAKDDGYVPRESVATLQEIWP---G--SEVRWLDG- 314 (337)
T ss_pred HHHHHHCCCCCCHHHHHHHHHHHHHHCCHHCCCCCCCCCEEEEEEECCCCEECCHHHCCHHHHCC---C--CEEEEEEC-
T ss_conf 33331011213689999999876310202127998888617999825871217156360988589---9--73799706-
Q ss_pred CC--CCCCCHHHHHHHHHHHHHH
Q ss_conf 84--7558589999999999997
Q gi|254781093|r 189 NH--FFIGKVDELINECAHYLDN 209 (225)
Q Consensus 189 ~H--~f~~~~~~l~~~i~~fl~~ 209 (225)
T Consensus 315 GHVsA~l~~q~~fR~aI~dAf~R 337 (337)
T pfam09752 315 GHVSAYLLHQDAFRRAIKDALER 337 (337)
T ss_pred CCEEEEEECHHHHHHHHHHHHCC
T ss_conf 87788874157899999998519