RPS-BLAST 2.2.22 [Sep-27-2009] Database: CddA 21,609 sequences; 6,263,737 total letters Searching..................................................done Query= gi|254781093|ref|YP_003065506.1| hypothetical protein CLIBASIA_04975 [Candidatus Liberibacter asiaticus str. psy62] (225 letters) >gnl|CDD|32768 COG2945, COG2945, Predicted hydrolase of the alpha/beta superfamily [General function prediction only]. Length = 210 Score = 299 bits (766), Expect = 5e-82 Identities = 126/209 (60%), Positives = 154/209 (73%), Gaps = 6/209 (2%) Query: 1 MPEVVFNGPSGRLEGRYQPSTNPNAPIALILHPHPRFGGTMNDNIVYQLFYLFQQRGFVS 60 MP V+ NGP+GRLEGRY+P+ P APIALI HPHP FGGTMN+ +V L +RGF + Sbjct: 4 MPTVIINGPAGRLEGRYEPAKTPAAPIALICHPHPLFGGTMNNKVVQTLARALVKRGFAT 63 Query: 61 LRFNFRGIGRSEGEFDYGDGELSDAAAALDWVQSLNPESKSCWIAGYSFGAWISMQLLMR 120 LRFNFRG+GRS+GEFD G GEL DAAAALDW+Q+ +P+S SCW+AG+SFGA+I+MQL MR Sbjct: 64 LRFNFRGVGRSQGEFDNGIGELEDAAAALDWLQARHPDSASCWLAGFSFGAYIAMQLAMR 123 Query: 121 RPEINGFISVAPQPKSYDFSFLAPCPSSGLIINGSNDTVATTSDVKDLVNKLMNQKGISI 180 RPEI FIS+ P +YDFSFLAPCPS GL+I G D DV DLV L Q+ I I Sbjct: 124 RPEILVFISILPPINAYDFSFLAPCPSPGLVIQGDAD------DVVDLVAVLKWQESIKI 177 Query: 181 THKVIPDANHFFIGKVDELINECAHYLDN 209 T IP A+HFF GK+ EL + A +L++ Sbjct: 178 TVITIPGADHFFHGKLIELRDTIADFLED 206 >gnl|CDD|30778 COG0429, COG0429, Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]. Length = 345 Score = 50.3 bits (120), Expect = 5e-07 Identities = 22/92 (23%), Positives = 36/92 (39%), Gaps = 6/92 (6%) Query: 22 NPNAPIALILHPHPRFGGTMNDNIVYQLFYLFQQRGFVSLRFNFRGIGRSEGEFD--YGD 79 P+ ++ H G+ N L +RG++ + F+FRG Y Sbjct: 72 AAKKPLVVLFHG---LEGSSNSPYARGLMRALSRRGWLVVVFHFRGCSGEANTSPRLYHS 128 Query: 80 GELSDAAAALDWVQSLNPESKSCWIAGYSFGA 111 GE D LDW+++ P + G+S G Sbjct: 129 GETEDIRFFLDWLKARFPPRPL-YAVGFSLGG 159 >gnl|CDD|31695 COG1506, DAP2, Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]. Length = 620 Score = 49.8 bits (118), Expect = 6e-07 Identities = 45/223 (20%), Positives = 72/223 (32%), Gaps = 57/223 (25%) Query: 19 PSTNPNAPIALILH--PHPRFGGTMNDNIVYQLFYLFQQRGFVSLRFNFRGIGRSEGEF- 75 P+ + +H P + G + N I G+ L N+RG EF Sbjct: 388 FDPRKKYPLIVYIHGGPSAQVGYSFNPEIQV-----LASAGYAVLAPNYRGSTGYGREFA 442 Query: 76 -----DYGDGELSDAAAALDWVQSLN--PESKSCWIAGYSFGAWISMQLLMRRPEINGFI 128 D+G +L D AA+D + L + I G S+G ++++ + P + Sbjct: 443 DAIRGDWGGVDLEDLIAAVDALVKLPLVDPERIG-ITGGSYGGYMTLLAATKTPRFKAAV 501 Query: 129 SVAP------------------------------------QPKSYDFSFLAPCPSSGLII 152 +VA P Y + P L+I Sbjct: 502 AVAGGVDWLLYFGESTEGLRFDPEENGGGPPEDREKYEDRSPIFYADNIKTPL----LLI 557 Query: 153 NGSNDTVATTSDVKDLVNKLMNQKGISITHKVIPDANHFFIGK 195 +G D + LV+ L +KG + V PD H F Sbjct: 558 HGEEDDRVPIEQAEQLVDAL-KRKGKPVELVVFPDEGHGFSRP 599 >gnl|CDD|30761 COG0412, COG0412, Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]. Length = 236 Score = 47.3 bits (112), Expect = 4e-06 Identities = 43/210 (20%), Positives = 73/210 (34%), Gaps = 30/210 (14%) Query: 3 EVVFNGPSGRLEGR-YQPSTNPNAPIALILHPHPRFGGTMNDNIVYQLFYLFQQRGFVSL 61 +V P G L +P+ P ++LH FG +N +I + + G+V L Sbjct: 4 DVTIPAPDGELPAYLARPAGAGGFPGVIVLHE--IFG--LNPHIR-DVARRLAKAGYVVL 58 Query: 62 RFNFRGIGRSEGEFDYGDGE----------------LSDAAAALDWVQSLNPE-SKSCWI 104 + GR D D L+D AALD++ K + Sbjct: 59 APDL--YGRQGDPTDIEDEPAELETGLVERVDPAEVLADIDAALDYLARQPQVDPKRIGV 116 Query: 105 AGYSFGAWISMQLLMRRPEINGFISVAPQP--KSYDFSFLAPCPSSGLIINGSNDTVATT 162 G+ G +++ R PE+ ++ + P L+ D Sbjct: 117 VGFCMGGGLALLAATRAPEVKAAVAFYGGLIADDTADAPKIKVPV--LLHLAGEDPYIPA 174 Query: 163 SDVKDLVNKLMNQKGISITHKVIPDANHFF 192 +DV L L + G+ + ++ P A H F Sbjct: 175 ADVDALAAALED-AGVKVDLEIYPGAGHGF 203 >gnl|CDD|32759 COG2936, COG2936, Predicted acyl esterases [General function prediction only]. Length = 563 Score = 45.0 bits (106), Expect = 2e-05 Identities = 20/80 (25%), Positives = 30/80 (37%), Gaps = 4/80 (5%) Query: 17 YQPSTNPNAPIALILHPHP---RFGGTMNDNIVYQLFYLFQQRGFVSLRFNFRGIGRSEG 73 Y+P+ P+ L P R G F +G+ + + RG G SEG Sbjct: 37 YRPAGAGPLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAAQGYAVVNQDVRGRGGSEG 96 Query: 74 EFD-YGDGELSDAAAALDWV 92 FD E D ++W+ Sbjct: 97 VFDPESSREAEDGYDTIEWL 116 >gnl|CDD|145338 pfam02129, Peptidase_S15, X-Pro dipeptidyl-peptidase (S15 family). Length = 265 Score = 43.5 bits (103), Expect = 5e-05 Identities = 27/117 (23%), Positives = 42/117 (35%), Gaps = 18/117 (15%) Query: 17 YQPSTNPNAPIALILHPHPRFGGTMNDNIVYQLFYL-----FQQRGFVSLRFNFRGIGRS 71 Y+P+ P+ ++L P D L F RG+ + + RG G S Sbjct: 10 YRPAAG-GGPVPVLLTRSPYG---KRDPGASTLALAHPEWEFAARGYAVVVQDVRGTGGS 65 Query: 72 EGEFDYGD-GELSDAAAALDWVQSLNPES--KSCWIA--GYSFGAWISMQLLMRRPE 123 EG F G E++D +DW+ P K + G S+ + P Sbjct: 66 EGVFTVGGPQEVADGKDVIDWLAG-QPWCNGK---VGMTGISYLGTTQLLAAATGPP 118 >gnl|CDD|37311 KOG2100, KOG2100, KOG2100, Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]. Length = 755 Score = 42.4 bits (99), Expect = 1e-04 Identities = 47/227 (20%), Positives = 84/227 (37%), Gaps = 38/227 (16%) Query: 3 EVVFNGPSGRLEGRYQPSTNPNAPIALILHPHPRFGGTMNDNIVYQLF--YLFQQRGFVS 60 ++ +G + P+ +P+ L++ + G + + + RGF Sbjct: 502 KIEIDGITANAILILPPNFDPSKKYPLLVVVYGGPGSQSVTSKFSVDWNEVVVSSRGFAV 561 Query: 61 LRFNFRGIG------RSEGEFDYGDGELSDAAAALDWVQSLN-PESKSCWIAGYSFGAWI 113 L+ + RG G RS + GD E+ D A+ V L + I G+S+G ++ Sbjct: 562 LQVDGRGSGGYGWDFRSALPRNLGDVEVKDQIEAVKKVLKLPFIDRSRVAIWGWSYGGYL 621 Query: 114 SMQLLMRRPE--INGFISVAP-----------------QP----KSYDFSFLAPCPS--- 147 +++LL P ++VAP P K Y+ S ++ + Sbjct: 622 TLKLLESDPGDVFKCGVAVAPVTDWLYYDSTYTERYMGLPSENDKGYEESSVSSPANNIK 681 Query: 148 --SGLIINGSNDTVATTSDVKDLVNKLMNQKGISITHKVIPDANHFF 192 L+I+G+ D L+ L G+ V PD NH Sbjct: 682 TPKLLLIHGTEDDNVHFQQSAILIKAL-QNAGVPFRLLVYPDENHGI 727 >gnl|CDD|39866 KOG4667, KOG4667, KOG4667, Predicted esterase [Lipid transport and metabolism]. Length = 269 Score = 41.9 bits (98), Expect = 1e-04 Identities = 46/224 (20%), Positives = 77/224 (34%), Gaps = 60/224 (26%) Query: 27 IALILHPHPRFGGTMNDNIVYQLFYLFQQRGFVSLRFNFRGIGRSEGEFDYGDG--ELSD 84 I ++ H F N I+ + ++ G + RF+F G G SEG F YG+ E D Sbjct: 35 IVVLCHG---FRSHKNAIIMKNVAKALEKEGISAFRFDFSGNGESEGSFYYGNYNTEADD 91 Query: 85 AAAALDWVQSLNPESKSCWIAGYSFGAWISMQLLMRRPEI-------------------- 124 + + + + N I G+S G + + + +I Sbjct: 92 LHSVIQYFSNSNRVVPV--ILGHSKGGDVVLLYASKYHDIRNVINCSGRYDLKNGINERL 149 Query: 125 ----------NGFISVAPQPKSYDF--------SFLA-----PCPS-----SGLIINGSN 156 GFI V P+ Y + L C L ++GS Sbjct: 150 GEDYLERIKEQGFIDVGPRKGKYGYRVTEESLMDRLNTDIHEACLKIDKQCRVLTVHGSE 209 Query: 157 DTVATTSDVKDLVNKLMNQKGISITHKVIPDANHFFIGKVDELI 200 D + D K+ + N K ++I A+H + G +L+ Sbjct: 210 DEIVPVEDAKEFAKIIPNHK-----LEIIEGADHNYTGHQSQLV 248 >gnl|CDD|34371 COG4757, COG4757, Predicted alpha/beta hydrolase [General function prediction only]. Length = 281 Score = 41.5 bits (97), Expect = 2e-04 Identities = 35/134 (26%), Positives = 53/134 (39%), Gaps = 16/134 (11%) Query: 2 PEVVFNGPSG-RLEGRYQPSTNPNAPIALILHPHPRFGGTMNDNIVYQLFYLF-QQRGFV 59 E P G L G+ P+ A L++ G Y+ F + GF Sbjct: 6 TEAHLPAPDGYSLPGQRFPADGK-ASGRLVVAGATGVGQ-----YFYRRFAAAAAKAGFE 59 Query: 60 SLRFNFRGIGRSE------GEFDYGDGELSDAAAALDWVQSLNPESKSCWIAGYSFGAWI 113 L F++RGIG+S ++ Y D D AAL ++ P ++ G+SFG Sbjct: 60 VLTFDYRGIGQSRPASLSGSQWRYLDWARLDFPAALAALKKALPGHPLYFV-GHSFGGQA 118 Query: 114 SMQLLMRRPEINGF 127 LL + P+ F Sbjct: 119 L-GLLGQHPKYAAF 131 >gnl|CDD|30941 COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]. Length = 282 Score = 39.7 bits (90), Expect = 7e-04 Identities = 24/126 (19%), Positives = 47/126 (37%), Gaps = 10/126 (7%) Query: 10 SGRLEGRYQPSTNPNAPIALILHPHPRFGGTMNDNIVYQLFYLFQQRGFVSLRFNFRGIG 69 + + Y+ + P+ L+ F G+ + + + + RG G Sbjct: 7 ADGVRLAYREAGGGGPPLVLL----HGFPGSSSVWRPVFKVLPALAARYRVIAPDLRGHG 62 Query: 70 RSEGEFDYGDGELSDAAAALDWVQSLNPESKSCWIAGYSFGAWISMQLLMRRPE-INGFI 128 RS+ D AA LD + + G+S G +++ L +R P+ + G + Sbjct: 63 RSDPAGYSLSAYADDLAALLD-----ALGLEKVVLVGHSMGGAVALALALRHPDRVRGLV 117 Query: 129 SVAPQP 134 + P P Sbjct: 118 LIGPAP 123 >gnl|CDD|38253 KOG3043, KOG3043, KOG3043, Predicted hydrolase related to dienelactone hydrolase [General function prediction only]. Length = 242 Score = 39.5 bits (92), Expect = 7e-04 Identities = 24/110 (21%), Positives = 41/110 (37%), Gaps = 3/110 (2%) Query: 84 DAAAALDWVQSLNPESKSCWIAGYSFGAWISMQLLMRRPEINGFISVAPQPKSYDFSFLA 143 D A + W+++ + +SK + G+ +GA + + L + PE + +S P Sbjct: 105 DITAVVKWLKN-HGDSKKIGVVGFCWGAKVVVTLSAKDPEFDAGVSFHPSFVDSADIANV 163 Query: 144 PCPSSGLIINGSNDTVATTSDVKDLVNKLMNQKGISITHKVIPDANHFFI 193 P L + D DVK KL + K H F+ Sbjct: 164 KAPI--LFLFAELDEDVPPKDVKAWEEKLKENPAVGSQVKTFSGVGHGFV 211 >gnl|CDD|144228 pfam00561, Abhydrolase_1, alpha/beta hydrolase fold. This catalytic domain is found in a very wide range of enzymes. Length = 225 Score = 38.3 bits (89), Expect = 0.002 Identities = 15/71 (21%), Positives = 27/71 (38%), Gaps = 3/71 (4%) Query: 63 FNFRGIGRSEGEFDYGDGELSDAAAALDWVQSLNPESKSCWIAGYSFGAWISMQLLMRRP 122 F+ RG GRS A +Q+L + + G+S G I++ + P Sbjct: 6 FDLRGFGRSSPPDLADYRFDDLAEDLEALLQALGLDKVNLV--GHSMGGLIALAYAAKYP 63 Query: 123 E-INGFISVAP 132 + + + V Sbjct: 64 DRVKALVLVGT 74 >gnl|CDD|37049 KOG1838, KOG1838, KOG1838, Alpha/beta hydrolase [General function prediction only]. Length = 409 Score = 37.9 bits (88), Expect = 0.002 Identities = 24/92 (26%), Positives = 43/92 (46%), Gaps = 10/92 (10%) Query: 26 PIALILHPHPRFGGTMNDNIVYQLFYLFQQRGFVSLRFNFRGIGRSEGE----FDYGDGE 81 PI +IL G +++ V L + Q++G+ + FN RG+G S+ F G E Sbjct: 126 PIVVILPG---LTGGSHESYVRHLVHEAQRKGYRVVVFNHRGLGGSKLTTPRLFTAGWTE 182 Query: 82 LSDAAAALDWVQSLNPESKSCWIAGYSFGAWI 113 D ++ ++ P++ + G+S G I Sbjct: 183 --DLREVVNHIKKRYPQAP-LFAVGFSMGGNI 211 >gnl|CDD|36668 KOG1455, KOG1455, KOG1455, Lysophospholipase [Lipid transport and metabolism]. Length = 313 Score = 37.2 bits (86), Expect = 0.003 Identities = 26/123 (21%), Positives = 48/123 (39%), Gaps = 9/123 (7%) Query: 16 RYQPSTNPNAPIALILHPHPRFGGTMNDNIVYQLFY-LFQQRGFVSLRFNFRGIGRSEGE 74 + + P L+ H G + + YQ + GF ++ G GRS+G Sbjct: 43 QSWLPLSGTEPRGLVFLCH---GYGEHSSWRYQSTAKRLAKSGFAVYAIDYEGHGRSDGL 99 Query: 75 FDY---GDGELSDAAAALDWVQSLNPES-KSCWIAGYSFGAWISMQLLMRRPEI-NGFIS 129 Y D + D + D ++ ++ G S G +++ + ++ P +G I Sbjct: 100 HAYVPSFDLVVDDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDPNFWDGAIL 159 Query: 130 VAP 132 VAP Sbjct: 160 VAP 162 >gnl|CDD|144059 pfam00326, Peptidase_S9, Prolyl oligopeptidase family. Length = 212 Score = 36.0 bits (84), Expect = 0.007 Identities = 24/91 (26%), Positives = 40/91 (43%), Gaps = 8/91 (8%) Query: 50 FYLFQQRGFVSLRFNFRGIG------RSEGEFDYGDGELSDAAAALDWVQSLN-PESKSC 102 L RG+V N RG G G+ D G E D AA +++ + + Sbjct: 7 LQLLADRGYVVAVANGRGSGGYGRAWHDAGKGDLGQNEFDDFIAAAEYLIAQGYVDPDRL 66 Query: 103 WIAGYSFGAWISMQLLMRRPEI-NGFISVAP 132 I G S+G +++ L +RP++ ++V P Sbjct: 67 AIWGGSYGGYLTGAALNQRPDLFKAAVAVVP 97 >gnl|CDD|37492 KOG2281, KOG2281, KOG2281, Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]. Length = 867 Score = 35.0 bits (80), Expect = 0.016 Identities = 34/172 (19%), Positives = 61/172 (35%), Gaps = 18/172 (10%) Query: 44 NIVYQLFYLFQQRGFVSLRFNFRGIGRSEGEFD------YGDGELSDAAAALDWVQSLNP 97 I Y F G+V + + RG +F+ G E+ D L + Sbjct: 663 GIQYLRFCRLASLGYVVVFIDNRGSAHRGLKFESHIKKKMGQVEVEDQVEGLQMLAEQTG 722 Query: 98 ESKSCWIA--GYSFGAWISMQLLMRRPEI-NGFISVAPQP--KSYDFSFLAPCPSSGLII 152 + G+S+G ++S+ L + P I I+ AP + YD + + Sbjct: 723 FIDMDRVGVHGWSYGGYLSLMGLAQYPNIFRVAIAGAPVTDWRLYDTGY----TERYMGY 778 Query: 153 NGSNDTVATTSDVKDLVNKLMN-QKGISITHKVIPDANHFFIGKVDELINEC 203 +N+ V V KL + + + H +I + HF L++ Sbjct: 779 PDNNEHGYGAGSVAGHVEKLPDEPNRLLLVHGLIDENVHFA--HTSRLVSAL 828 >gnl|CDD|39380 KOG4178, KOG4178, KOG4178, Soluble epoxide hydrolase [Lipid transport and metabolism]. Length = 322 Score = 33.7 bits (77), Expect = 0.045 Identities = 28/110 (25%), Positives = 48/110 (43%), Gaps = 15/110 (13%) Query: 26 PIALILHPHPRFGGTMNDNIVYQLFYLFQQRGFVSLRFNFRGIGRS---EGEFDYGDGEL 82 PI L+LH P + I RG+ + + RG G S +Y EL Sbjct: 45 PIVLLLHGFPESWYSWRHQIP-----GLASRGYRVIAPDLRGYGFSDAPPHISEYTIDEL 99 Query: 83 -SDAAAALDWVQSLNPESKSCWIAGYSFGAWISMQLLMRRPE-INGFISV 130 D A LD + K ++ G+ +GA ++ +L + PE ++G +++ Sbjct: 100 VGDIVALLDHL-----GLKKAFLVGHDWGAIVAWRLALFYPERVDGLVTL 144 >gnl|CDD|39827 KOG4627, KOG4627, KOG4627, Kynurenine formamidase [Amino acid transport and metabolism]. Length = 270 Score = 32.3 bits (73), Expect = 0.11 Identities = 12/49 (24%), Positives = 24/49 (48%), Gaps = 2/49 (4%) Query: 82 LSDAAAALDWVQSLNPESKSCWIAGYSFGAWISMQLLMRR--PEINGFI 128 ++ ++++ +K G+S GA ++ Q +MR+ P I G I Sbjct: 118 MTQFTHGVNFILKYTENTKVLTFGGHSAGAHLAAQAVMRQRSPRIWGLI 166 >gnl|CDD|36765 KOG1552, KOG1552, KOG1552, Predicted alpha/beta hydrolase [General function prediction only]. Length = 258 Score = 32.2 bits (73), Expect = 0.11 Identities = 15/70 (21%), Positives = 31/70 (44%), Gaps = 2/70 (2%) Query: 63 FNFRGIGRSEGEFDYGDGELSDAAAALDWVQSLNPESKSCWIAGYSFGAWISMQLLMRRP 122 +++ G GRS G+ +D A +W+++ + + G S G ++ L R P Sbjct: 94 YDYSGYGRSSGK-PSERNLYADIKAVYEWLRNRYGSPERIILYGQSIGTVPTVDLASRYP 152 Query: 123 EINGFISVAP 132 + + +P Sbjct: 153 -LAAVVLHSP 161 >gnl|CDD|32448 COG2267, PldB, Lysophospholipase [Lipid metabolism]. Length = 298 Score = 31.9 bits (72), Expect = 0.16 Identities = 34/138 (24%), Positives = 55/138 (39%), Gaps = 12/138 (8%) Query: 1 MPEVVFNGPSG-RLEGRYQPSTNPNAPIALILHPHPRFGGTMNDNIVYQLFYLFQQRGFV 59 E F G G RL R + P + +++H G + +L RGF Sbjct: 9 RTEGYFTGADGTRLRYRTWAAPEPPKGVVVLVH-----GLGEHSGRYEELADDLAARGFD 63 Query: 60 SLRFNFRGIGRSE----GEFDYGDGELSDAAAALDWVQSLNPESKSCWIAGYSFGAWISM 115 + RG GRS G D + D A ++ + +P ++ G+S G I++ Sbjct: 64 VYALDLRGHGRSPRGQRGHVDSFADYVDDLDAFVETIAEPDPGLPV-FLLGHSMGGLIAL 122 Query: 116 QLLMRRPE-INGFISVAP 132 L R P I+G + +P Sbjct: 123 LYLARYPPRIDGLVLSSP 140 Score = 28.8 bits (64), Expect = 1.1 Identities = 17/63 (26%), Positives = 24/63 (38%), Gaps = 9/63 (14%) Query: 150 LIINGSNDTVATTSDVKDLVNKLMNQKGISITHKVIPDANHFFIGKVDELINECAHYLDN 209 L++ G +D V +V+ L KVIP A H EL+NE + Sbjct: 232 LLLQGGDDRV--VDNVEGLARFFERAGSPDKELKVIPGAYH-------ELLNEPDRAREE 282 Query: 210 SLD 212 L Sbjct: 283 VLK 285 >gnl|CDD|146096 pfam03289, Pox_I1, Poxvirus protein I1. Length = 312 Score = 30.0 bits (68), Expect = 0.48 Identities = 19/68 (27%), Positives = 27/68 (39%), Gaps = 21/68 (30%) Query: 163 SDVKDLVNKLMNQKGISITHKVIPDANHFFIG---------KVDELINECAHYLDNSLDE 213 SDVK L N+L A+ F K++ELIN+ LDE Sbjct: 126 SDVKTLANRLKT------------SASSFEFNGHTYVLENDKIEELINQLVKNGAIILDE 173 Query: 214 KFTLLKSI 221 K ++ S+ Sbjct: 174 KSSIKDSM 181 >gnl|CDD|33312 COG3509, LpqC, Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]. Length = 312 Score = 29.6 bits (66), Expect = 0.71 Identities = 12/60 (20%), Positives = 25/60 (41%) Query: 103 WIAGYSFGAWISMQLLMRRPEINGFISVAPQPKSYDFSFLAPCPSSGLIINGSNDTVATT 162 ++ G S G ++ +L P+I I+ + + P P S + +G+ D + Sbjct: 147 YVTGLSNGGRMANRLACEYPDIFAAIAPVAGLLALGVACTPPRPVSVMAFHGTADPLNPY 206 >gnl|CDD|31002 COG0657, Aes, Esterase/lipase [Lipid metabolism]. Length = 312 Score = 28.4 bits (62), Expect = 1.6 Identities = 23/110 (20%), Positives = 40/110 (36%), Gaps = 10/110 (9%) Query: 16 RYQPSTNPNAPIALILHPHPR-FGGTMNDNIVYQLFYLFQQRGFVSLRFNFRGIGRSEGE 74 Y+P A ++L+ H + + L G V + ++R E Sbjct: 68 VYRPDRKAAATAPVVLYLHGGGWVLGSLRTHDALVARLAAAAGAVVVSVDYRLA--PEHP 125 Query: 75 FDYGDGELSDAAAALDWVQSLNPE----SKSCWIAGYSFGAWISMQLLMR 120 F L DA AA W+++ E +AG S G +++ L + Sbjct: 126 F---PAALEDAYAAYRWLRANAAELGIDPSRIAVAGDSAGGHLALALALA 172 >gnl|CDD|30827 COG0479, FrdB, Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit [Energy production and conversion]. Length = 234 Score = 27.9 bits (62), Expect = 2.3 Identities = 11/51 (21%), Positives = 20/51 (39%), Gaps = 4/51 (7%) Query: 145 CPSSGLIINGSNDTVATTSDVKDLVN---KLMNQKGISITHKVIPDANHFF 192 C S + ING +A + +KDL + + ++ D F+ Sbjct: 58 CGSCAMNINGKP-RLACKTLMKDLEEGVITIEPLPNFPVIRDLVVDMEEFY 107 >gnl|CDD|99984 cd03813, GT1_like_3, This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria, while some of them are also found in Archaea and eukaryotes.. Length = 475 Score = 27.6 bits (62), Expect = 2.9 Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 6/35 (17%) Query: 164 DVKDLVNKLMNQKGISITHKVIPDANHFFIGKVDE 198 D+K + + +I K IPDA + IG DE Sbjct: 307 DIKTFI------RAAAIVRKKIPDAEGWVIGPTDE 335 >gnl|CDD|145081 pfam01738, DLH, Dienelactone hydrolase family. Length = 216 Score = 27.7 bits (62), Expect = 2.9 Identities = 20/118 (16%), Positives = 37/118 (31%), Gaps = 14/118 (11%) Query: 82 LSDAAAALDWVQSLNPESKSCWIA--GYSFGAWISMQLLMRRPEINGFIS-----VAPQP 134 + D AA+++++ P + + G+ G ++ L R ++ +S P Sbjct: 79 VDDLLAAINYLRGQ-PYVDTKKVGVVGFCLGGRLAFL-LAARNGVDAAVSFYGGLPPEPP 136 Query: 135 KSYDFSFLAPCPSSGLIINGSNDTVATTSDVKDLVNKLMNQKGISITHKVIPDANHFF 192 + AP L G D L + + P A H F Sbjct: 137 LDEAPAIKAPI----LAHFGEEDPFVPAEARDLLEEA-LRAANVDHELHWYPGAGHAF 189 >gnl|CDD|143440 cd07122, ALDH_F20_ACDH, Coenzyme A acylating aldehyde dehydrogenase (ACDH), ALDH family 20-like. Coenzyme A acylating aldehyde dehydrogenase (ACDH, EC=1.2.1.10), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA . The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH and may be critical enzymes in the fermentative pathway. Length = 436 Score = 26.3 bits (59), Expect = 6.6 Identities = 14/30 (46%), Positives = 14/30 (46%), Gaps = 12/30 (40%) Query: 19 PSTNP------NAPIAL------ILHPHPR 36 PSTNP A IAL I PHPR Sbjct: 104 PSTNPTSTAIFKALIALKTRNAIIFSPHPR 133 >gnl|CDD|32977 COG3164, COG3164, Predicted membrane protein [Function unknown]. Length = 1271 Score = 26.4 bits (58), Expect = 6.8 Identities = 11/36 (30%), Positives = 13/36 (36%), Gaps = 4/36 (11%) Query: 81 ELSDAAAALD----WVQSLNPESKSCWIAGYSFGAW 112 E S +D SL K CW+ G FG Sbjct: 982 EDSSPLPTVDPNFRSWPSLQLRCKDCWLGGQKFGRI 1017 >gnl|CDD|37069 KOG1858, KOG1858, KOG1858, Anaphase-promoting complex (APC), subunit 1 (meiotic check point regulator/Tsg24) [Cell cycle control, cell division, chromosome partitioning, Posttranslational modification, protein turnover, chaperones]. Length = 1496 Score = 26.1 bits (57), Expect = 7.4 Identities = 11/31 (35%), Positives = 17/31 (54%) Query: 14 EGRYQPSTNPNAPIALILHPHPRFGGTMNDN 44 GRY ST+ + AL++ P F + +DN Sbjct: 1246 GGRYTISTSNLSIAALLISLFPHFPISPSDN 1276 >gnl|CDD|173812 cd07487, Peptidases_S8_1, Peptidase S8 family domain, uncharacterized subfamily 1. This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values. Length = 264 Score = 26.0 bits (58), Expect = 8.1 Identities = 10/21 (47%), Positives = 11/21 (52%) Query: 76 DYGDGELSDAAAALDWVQSLN 96 D G G SD A +DWV N Sbjct: 82 DSGSGSESDIIAGIDWVVENN 102 >gnl|CDD|32453 COG2272, PnbA, Carboxylesterase type B [Lipid metabolism]. Length = 491 Score = 26.1 bits (57), Expect = 8.2 Identities = 23/120 (19%), Positives = 44/120 (36%), Gaps = 14/120 (11%) Query: 24 NAPIALILHPHPRFGGTMNDNIVYQLFYLFQQRGFVSLRFNFR-------GIGRSEGEFD 76 P+ + +H G+ ++ + Y L + V + N+R + + E Sbjct: 93 KLPVMVYIHGGGYIMGSGSEPL-YDGSALAARGDVVVVSVNYRLGALGFLDLSSLDTEDA 151 Query: 77 YGDGE-LSDAAAALDWVQ----SLNPESKSCWIAGYSFGAWISMQLLMRRPEINGFISVA 131 + L D AL WV+ + + ++ + G S GA + L+ P G A Sbjct: 152 FASNLGLLDQILALKWVRDNIEAFGGDPQNVTLFGESAGAASILT-LLAVPSAKGLFHRA 210 >gnl|CDD|36437 KOG1223, KOG1223, KOG1223, Isochorismate synthase [Amino acid transport and metabolism]. Length = 508 Score = 26.1 bits (57), Expect = 8.7 Identities = 17/64 (26%), Positives = 23/64 (35%), Gaps = 10/64 (15%) Query: 84 DAAAALDWVQSLNPESKSCWIAGYSF-GAWISMQLL------MRRPEINGFISVAPQPKS 136 D A A W +S S ++ YS GA S ++L M PEI S + Sbjct: 55 DRAKASFWFESQETGSDVSPVSRYSVVGAPPSYEILAKKEDPMVIPEI---GSAFFFVQL 111 Query: 137 YDFS 140 Sbjct: 112 VPVL 115 >gnl|CDD|111355 pfam02449, Glyco_hydro_42, Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyses the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. Length = 376 Score = 26.1 bits (58), Expect = 9.3 Identities = 8/33 (24%), Positives = 14/33 (42%), Gaps = 9/33 (27%) Query: 118 LMRRPEINGFISVA--------PQPKSYDFSFL 142 LM+ +N + + P+ YDF +L Sbjct: 18 LMKEAGVN-VVRLGIFAWAKLEPEEGKYDFGWL 49 Database: CddA Posted date: Feb 4, 2011 9:38 PM Number of letters in database: 6,263,737 Number of sequences in database: 21,609 Lambda K H 0.321 0.139 0.426 Gapped Lambda K H 0.267 0.0701 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 21609 Number of Hits to DB: 2,886,764 Number of extensions: 151127 Number of successful extensions: 324 Number of sequences better than 10.0: 1 Number of HSP's gapped: 316 Number of HSP's successfully gapped: 40 Length of query: 225 Length of database: 6,263,737 Length adjustment: 90 Effective length of query: 135 Effective length of database: 4,318,927 Effective search space: 583055145 Effective search space used: 583055145 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 56 (25.4 bits)