RPS-BLAST 2.2.22 [Sep-27-2009]

Database: CddA 
           21,609 sequences; 6,263,737 total letters

Searching..................................................done

Query= gi|254781093|ref|YP_003065506.1| hypothetical protein
CLIBASIA_04975 [Candidatus Liberibacter asiaticus str. psy62]
         (225 letters)



>gnl|CDD|32768 COG2945, COG2945, Predicted hydrolase of the alpha/beta superfamily
           [General function prediction only].
          Length = 210

 Score =  299 bits (766), Expect = 5e-82
 Identities = 126/209 (60%), Positives = 154/209 (73%), Gaps = 6/209 (2%)

Query: 1   MPEVVFNGPSGRLEGRYQPSTNPNAPIALILHPHPRFGGTMNDNIVYQLFYLFQQRGFVS 60
           MP V+ NGP+GRLEGRY+P+  P APIALI HPHP FGGTMN+ +V  L     +RGF +
Sbjct: 4   MPTVIINGPAGRLEGRYEPAKTPAAPIALICHPHPLFGGTMNNKVVQTLARALVKRGFAT 63

Query: 61  LRFNFRGIGRSEGEFDYGDGELSDAAAALDWVQSLNPESKSCWIAGYSFGAWISMQLLMR 120
           LRFNFRG+GRS+GEFD G GEL DAAAALDW+Q+ +P+S SCW+AG+SFGA+I+MQL MR
Sbjct: 64  LRFNFRGVGRSQGEFDNGIGELEDAAAALDWLQARHPDSASCWLAGFSFGAYIAMQLAMR 123

Query: 121 RPEINGFISVAPQPKSYDFSFLAPCPSSGLIINGSNDTVATTSDVKDLVNKLMNQKGISI 180
           RPEI  FIS+ P   +YDFSFLAPCPS GL+I G  D      DV DLV  L  Q+ I I
Sbjct: 124 RPEILVFISILPPINAYDFSFLAPCPSPGLVIQGDAD------DVVDLVAVLKWQESIKI 177

Query: 181 THKVIPDANHFFIGKVDELINECAHYLDN 209
           T   IP A+HFF GK+ EL +  A +L++
Sbjct: 178 TVITIPGADHFFHGKLIELRDTIADFLED 206


>gnl|CDD|30778 COG0429, COG0429, Predicted hydrolase of the alpha/beta-hydrolase
           fold [General function prediction only].
          Length = 345

 Score = 50.3 bits (120), Expect = 5e-07
 Identities = 22/92 (23%), Positives = 36/92 (39%), Gaps = 6/92 (6%)

Query: 22  NPNAPIALILHPHPRFGGTMNDNIVYQLFYLFQQRGFVSLRFNFRGIGRSEGEFD--YGD 79
               P+ ++ H      G+ N      L     +RG++ + F+FRG           Y  
Sbjct: 72  AAKKPLVVLFHG---LEGSSNSPYARGLMRALSRRGWLVVVFHFRGCSGEANTSPRLYHS 128

Query: 80  GELSDAAAALDWVQSLNPESKSCWIAGYSFGA 111
           GE  D    LDW+++  P     +  G+S G 
Sbjct: 129 GETEDIRFFLDWLKARFPPRPL-YAVGFSLGG 159


>gnl|CDD|31695 COG1506, DAP2, Dipeptidyl aminopeptidases/acylaminoacyl-peptidases
           [Amino acid transport and metabolism].
          Length = 620

 Score = 49.8 bits (118), Expect = 6e-07
 Identities = 45/223 (20%), Positives = 72/223 (32%), Gaps = 57/223 (25%)

Query: 19  PSTNPNAPIALILH--PHPRFGGTMNDNIVYQLFYLFQQRGFVSLRFNFRGIGRSEGEF- 75
                  P+ + +H  P  + G + N  I           G+  L  N+RG      EF 
Sbjct: 388 FDPRKKYPLIVYIHGGPSAQVGYSFNPEIQV-----LASAGYAVLAPNYRGSTGYGREFA 442

Query: 76  -----DYGDGELSDAAAALDWVQSLN--PESKSCWIAGYSFGAWISMQLLMRRPEINGFI 128
                D+G  +L D  AA+D +  L      +   I G S+G ++++    + P     +
Sbjct: 443 DAIRGDWGGVDLEDLIAAVDALVKLPLVDPERIG-ITGGSYGGYMTLLAATKTPRFKAAV 501

Query: 129 SVAP------------------------------------QPKSYDFSFLAPCPSSGLII 152
           +VA                                      P  Y  +   P     L+I
Sbjct: 502 AVAGGVDWLLYFGESTEGLRFDPEENGGGPPEDREKYEDRSPIFYADNIKTPL----LLI 557

Query: 153 NGSNDTVATTSDVKDLVNKLMNQKGISITHKVIPDANHFFIGK 195
           +G  D        + LV+ L  +KG  +   V PD  H F   
Sbjct: 558 HGEEDDRVPIEQAEQLVDAL-KRKGKPVELVVFPDEGHGFSRP 599


>gnl|CDD|30761 COG0412, COG0412, Dienelactone hydrolase and related enzymes
           [Secondary metabolites biosynthesis, transport, and
           catabolism].
          Length = 236

 Score = 47.3 bits (112), Expect = 4e-06
 Identities = 43/210 (20%), Positives = 73/210 (34%), Gaps = 30/210 (14%)

Query: 3   EVVFNGPSGRLEGR-YQPSTNPNAPIALILHPHPRFGGTMNDNIVYQLFYLFQQRGFVSL 61
           +V    P G L     +P+     P  ++LH    FG  +N +I   +     + G+V L
Sbjct: 4   DVTIPAPDGELPAYLARPAGAGGFPGVIVLHE--IFG--LNPHIR-DVARRLAKAGYVVL 58

Query: 62  RFNFRGIGRSEGEFDYGDGE----------------LSDAAAALDWVQSLNPE-SKSCWI 104
             +    GR     D  D                  L+D  AALD++        K   +
Sbjct: 59  APDL--YGRQGDPTDIEDEPAELETGLVERVDPAEVLADIDAALDYLARQPQVDPKRIGV 116

Query: 105 AGYSFGAWISMQLLMRRPEINGFISVAPQP--KSYDFSFLAPCPSSGLIINGSNDTVATT 162
            G+  G  +++    R PE+   ++            +     P   L+     D     
Sbjct: 117 VGFCMGGGLALLAATRAPEVKAAVAFYGGLIADDTADAPKIKVPV--LLHLAGEDPYIPA 174

Query: 163 SDVKDLVNKLMNQKGISITHKVIPDANHFF 192
           +DV  L   L +  G+ +  ++ P A H F
Sbjct: 175 ADVDALAAALED-AGVKVDLEIYPGAGHGF 203


>gnl|CDD|32759 COG2936, COG2936, Predicted acyl esterases [General function
           prediction only].
          Length = 563

 Score = 45.0 bits (106), Expect = 2e-05
 Identities = 20/80 (25%), Positives = 30/80 (37%), Gaps = 4/80 (5%)

Query: 17  YQPSTNPNAPIALILHPHP---RFGGTMNDNIVYQLFYLFQQRGFVSLRFNFRGIGRSEG 73
           Y+P+     P+ L     P   R G              F  +G+  +  + RG G SEG
Sbjct: 37  YRPAGAGPLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAAQGYAVVNQDVRGRGGSEG 96

Query: 74  EFD-YGDGELSDAAAALDWV 92
            FD     E  D    ++W+
Sbjct: 97  VFDPESSREAEDGYDTIEWL 116


>gnl|CDD|145338 pfam02129, Peptidase_S15, X-Pro dipeptidyl-peptidase (S15 family). 
          Length = 265

 Score = 43.5 bits (103), Expect = 5e-05
 Identities = 27/117 (23%), Positives = 42/117 (35%), Gaps = 18/117 (15%)

Query: 17  YQPSTNPNAPIALILHPHPRFGGTMNDNIVYQLFYL-----FQQRGFVSLRFNFRGIGRS 71
           Y+P+     P+ ++L   P       D     L        F  RG+  +  + RG G S
Sbjct: 10  YRPAAG-GGPVPVLLTRSPYG---KRDPGASTLALAHPEWEFAARGYAVVVQDVRGTGGS 65

Query: 72  EGEFDYGD-GELSDAAAALDWVQSLNPES--KSCWIA--GYSFGAWISMQLLMRRPE 123
           EG F  G   E++D    +DW+    P    K   +   G S+     +      P 
Sbjct: 66  EGVFTVGGPQEVADGKDVIDWLAG-QPWCNGK---VGMTGISYLGTTQLLAAATGPP 118


>gnl|CDD|37311 KOG2100, KOG2100, KOG2100, Dipeptidyl aminopeptidase
           [Posttranslational modification, protein turnover,
           chaperones].
          Length = 755

 Score = 42.4 bits (99), Expect = 1e-04
 Identities = 47/227 (20%), Positives = 84/227 (37%), Gaps = 38/227 (16%)

Query: 3   EVVFNGPSGRLEGRYQPSTNPNAPIALILHPHPRFGGTMNDNIVYQLF--YLFQQRGFVS 60
           ++  +G +        P+ +P+    L++  +   G     +     +   +   RGF  
Sbjct: 502 KIEIDGITANAILILPPNFDPSKKYPLLVVVYGGPGSQSVTSKFSVDWNEVVVSSRGFAV 561

Query: 61  LRFNFRGIG------RSEGEFDYGDGELSDAAAALDWVQSLN-PESKSCWIAGYSFGAWI 113
           L+ + RG G      RS    + GD E+ D   A+  V  L   +     I G+S+G ++
Sbjct: 562 LQVDGRGSGGYGWDFRSALPRNLGDVEVKDQIEAVKKVLKLPFIDRSRVAIWGWSYGGYL 621

Query: 114 SMQLLMRRPE--INGFISVAP-----------------QP----KSYDFSFLAPCPS--- 147
           +++LL   P       ++VAP                  P    K Y+ S ++   +   
Sbjct: 622 TLKLLESDPGDVFKCGVAVAPVTDWLYYDSTYTERYMGLPSENDKGYEESSVSSPANNIK 681

Query: 148 --SGLIINGSNDTVATTSDVKDLVNKLMNQKGISITHKVIPDANHFF 192
               L+I+G+ D          L+  L    G+     V PD NH  
Sbjct: 682 TPKLLLIHGTEDDNVHFQQSAILIKAL-QNAGVPFRLLVYPDENHGI 727


>gnl|CDD|39866 KOG4667, KOG4667, KOG4667, Predicted esterase [Lipid transport and
           metabolism].
          Length = 269

 Score = 41.9 bits (98), Expect = 1e-04
 Identities = 46/224 (20%), Positives = 77/224 (34%), Gaps = 60/224 (26%)

Query: 27  IALILHPHPRFGGTMNDNIVYQLFYLFQQRGFVSLRFNFRGIGRSEGEFDYGDG--ELSD 84
           I ++ H    F    N  I+  +    ++ G  + RF+F G G SEG F YG+   E  D
Sbjct: 35  IVVLCHG---FRSHKNAIIMKNVAKALEKEGISAFRFDFSGNGESEGSFYYGNYNTEADD 91

Query: 85  AAAALDWVQSLNPESKSCWIAGYSFGAWISMQLLMRRPEI-------------------- 124
             + + +  + N       I G+S G  + +    +  +I                    
Sbjct: 92  LHSVIQYFSNSNRVVPV--ILGHSKGGDVVLLYASKYHDIRNVINCSGRYDLKNGINERL 149

Query: 125 ----------NGFISVAPQPKSYDF--------SFLA-----PCPS-----SGLIINGSN 156
                      GFI V P+   Y +          L       C         L ++GS 
Sbjct: 150 GEDYLERIKEQGFIDVGPRKGKYGYRVTEESLMDRLNTDIHEACLKIDKQCRVLTVHGSE 209

Query: 157 DTVATTSDVKDLVNKLMNQKGISITHKVIPDANHFFIGKVDELI 200
           D +    D K+    + N K      ++I  A+H + G   +L+
Sbjct: 210 DEIVPVEDAKEFAKIIPNHK-----LEIIEGADHNYTGHQSQLV 248


>gnl|CDD|34371 COG4757, COG4757, Predicted alpha/beta hydrolase [General function
           prediction only].
          Length = 281

 Score = 41.5 bits (97), Expect = 2e-04
 Identities = 35/134 (26%), Positives = 53/134 (39%), Gaps = 16/134 (11%)

Query: 2   PEVVFNGPSG-RLEGRYQPSTNPNAPIALILHPHPRFGGTMNDNIVYQLFYLF-QQRGFV 59
            E     P G  L G+  P+    A   L++      G        Y+ F     + GF 
Sbjct: 6   TEAHLPAPDGYSLPGQRFPADGK-ASGRLVVAGATGVGQ-----YFYRRFAAAAAKAGFE 59

Query: 60  SLRFNFRGIGRSE------GEFDYGDGELSDAAAALDWVQSLNPESKSCWIAGYSFGAWI 113
            L F++RGIG+S        ++ Y D    D  AAL  ++   P     ++ G+SFG   
Sbjct: 60  VLTFDYRGIGQSRPASLSGSQWRYLDWARLDFPAALAALKKALPGHPLYFV-GHSFGGQA 118

Query: 114 SMQLLMRRPEINGF 127
              LL + P+   F
Sbjct: 119 L-GLLGQHPKYAAF 131


>gnl|CDD|30941 COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta
           hydrolase superfamily) [General function prediction
           only].
          Length = 282

 Score = 39.7 bits (90), Expect = 7e-04
 Identities = 24/126 (19%), Positives = 47/126 (37%), Gaps = 10/126 (7%)

Query: 10  SGRLEGRYQPSTNPNAPIALILHPHPRFGGTMNDNIVYQLFYLFQQRGFVSLRFNFRGIG 69
           +  +   Y+ +     P+ L+      F G+ +               +  +  + RG G
Sbjct: 7   ADGVRLAYREAGGGGPPLVLL----HGFPGSSSVWRPVFKVLPALAARYRVIAPDLRGHG 62

Query: 70  RSEGEFDYGDGELSDAAAALDWVQSLNPESKSCWIAGYSFGAWISMQLLMRRPE-INGFI 128
           RS+           D AA LD         +   + G+S G  +++ L +R P+ + G +
Sbjct: 63  RSDPAGYSLSAYADDLAALLD-----ALGLEKVVLVGHSMGGAVALALALRHPDRVRGLV 117

Query: 129 SVAPQP 134
            + P P
Sbjct: 118 LIGPAP 123


>gnl|CDD|38253 KOG3043, KOG3043, KOG3043, Predicted hydrolase related to
           dienelactone hydrolase [General function prediction
           only].
          Length = 242

 Score = 39.5 bits (92), Expect = 7e-04
 Identities = 24/110 (21%), Positives = 41/110 (37%), Gaps = 3/110 (2%)

Query: 84  DAAAALDWVQSLNPESKSCWIAGYSFGAWISMQLLMRRPEINGFISVAPQPKSYDFSFLA 143
           D  A + W+++ + +SK   + G+ +GA + + L  + PE +  +S  P           
Sbjct: 105 DITAVVKWLKN-HGDSKKIGVVGFCWGAKVVVTLSAKDPEFDAGVSFHPSFVDSADIANV 163

Query: 144 PCPSSGLIINGSNDTVATTSDVKDLVNKLMNQKGISITHKVIPDANHFFI 193
             P   L +    D      DVK    KL     +    K      H F+
Sbjct: 164 KAPI--LFLFAELDEDVPPKDVKAWEEKLKENPAVGSQVKTFSGVGHGFV 211


>gnl|CDD|144228 pfam00561, Abhydrolase_1, alpha/beta hydrolase fold.  This
           catalytic domain is found in a very wide range of
           enzymes.
          Length = 225

 Score = 38.3 bits (89), Expect = 0.002
 Identities = 15/71 (21%), Positives = 27/71 (38%), Gaps = 3/71 (4%)

Query: 63  FNFRGIGRSEGEFDYGDGELSDAAAALDWVQSLNPESKSCWIAGYSFGAWISMQLLMRRP 122
           F+ RG GRS             A      +Q+L  +  +    G+S G  I++    + P
Sbjct: 6   FDLRGFGRSSPPDLADYRFDDLAEDLEALLQALGLDKVNLV--GHSMGGLIALAYAAKYP 63

Query: 123 E-INGFISVAP 132
           + +   + V  
Sbjct: 64  DRVKALVLVGT 74


>gnl|CDD|37049 KOG1838, KOG1838, KOG1838, Alpha/beta hydrolase [General function
           prediction only].
          Length = 409

 Score = 37.9 bits (88), Expect = 0.002
 Identities = 24/92 (26%), Positives = 43/92 (46%), Gaps = 10/92 (10%)

Query: 26  PIALILHPHPRFGGTMNDNIVYQLFYLFQQRGFVSLRFNFRGIGRSEGE----FDYGDGE 81
           PI +IL       G  +++ V  L +  Q++G+  + FN RG+G S+      F  G  E
Sbjct: 126 PIVVILPG---LTGGSHESYVRHLVHEAQRKGYRVVVFNHRGLGGSKLTTPRLFTAGWTE 182

Query: 82  LSDAAAALDWVQSLNPESKSCWIAGYSFGAWI 113
             D    ++ ++   P++   +  G+S G  I
Sbjct: 183 --DLREVVNHIKKRYPQAP-LFAVGFSMGGNI 211


>gnl|CDD|36668 KOG1455, KOG1455, KOG1455, Lysophospholipase [Lipid transport and
           metabolism].
          Length = 313

 Score = 37.2 bits (86), Expect = 0.003
 Identities = 26/123 (21%), Positives = 48/123 (39%), Gaps = 9/123 (7%)

Query: 16  RYQPSTNPNAPIALILHPHPRFGGTMNDNIVYQLFY-LFQQRGFVSLRFNFRGIGRSEGE 74
           +     +   P  L+   H   G   + +  YQ       + GF     ++ G GRS+G 
Sbjct: 43  QSWLPLSGTEPRGLVFLCH---GYGEHSSWRYQSTAKRLAKSGFAVYAIDYEGHGRSDGL 99

Query: 75  FDY---GDGELSDAAAALDWVQSLNPES-KSCWIAGYSFGAWISMQLLMRRPEI-NGFIS 129
             Y    D  + D  +  D ++          ++ G S G  +++ + ++ P   +G I 
Sbjct: 100 HAYVPSFDLVVDDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDPNFWDGAIL 159

Query: 130 VAP 132
           VAP
Sbjct: 160 VAP 162


>gnl|CDD|144059 pfam00326, Peptidase_S9, Prolyl oligopeptidase family. 
          Length = 212

 Score = 36.0 bits (84), Expect = 0.007
 Identities = 24/91 (26%), Positives = 40/91 (43%), Gaps = 8/91 (8%)

Query: 50  FYLFQQRGFVSLRFNFRGIG------RSEGEFDYGDGELSDAAAALDWVQSLN-PESKSC 102
             L   RG+V    N RG G         G+ D G  E  D  AA +++ +    +    
Sbjct: 7   LQLLADRGYVVAVANGRGSGGYGRAWHDAGKGDLGQNEFDDFIAAAEYLIAQGYVDPDRL 66

Query: 103 WIAGYSFGAWISMQLLMRRPEI-NGFISVAP 132
            I G S+G +++   L +RP++    ++V P
Sbjct: 67  AIWGGSYGGYLTGAALNQRPDLFKAAVAVVP 97


>gnl|CDD|37492 KOG2281, KOG2281, KOG2281, Dipeptidyl
           aminopeptidases/acylaminoacyl-peptidases
           [Posttranslational modification, protein turnover,
           chaperones].
          Length = 867

 Score = 35.0 bits (80), Expect = 0.016
 Identities = 34/172 (19%), Positives = 61/172 (35%), Gaps = 18/172 (10%)

Query: 44  NIVYQLFYLFQQRGFVSLRFNFRGIGRSEGEFD------YGDGELSDAAAALDWVQSLNP 97
            I Y  F      G+V +  + RG      +F+       G  E+ D    L  +     
Sbjct: 663 GIQYLRFCRLASLGYVVVFIDNRGSAHRGLKFESHIKKKMGQVEVEDQVEGLQMLAEQTG 722

Query: 98  ESKSCWIA--GYSFGAWISMQLLMRRPEI-NGFISVAPQP--KSYDFSFLAPCPSSGLII 152
                 +   G+S+G ++S+  L + P I    I+ AP    + YD  +        +  
Sbjct: 723 FIDMDRVGVHGWSYGGYLSLMGLAQYPNIFRVAIAGAPVTDWRLYDTGY----TERYMGY 778

Query: 153 NGSNDTVATTSDVKDLVNKLMN-QKGISITHKVIPDANHFFIGKVDELINEC 203
             +N+       V   V KL +    + + H +I +  HF       L++  
Sbjct: 779 PDNNEHGYGAGSVAGHVEKLPDEPNRLLLVHGLIDENVHFA--HTSRLVSAL 828


>gnl|CDD|39380 KOG4178, KOG4178, KOG4178, Soluble epoxide hydrolase [Lipid
           transport and metabolism].
          Length = 322

 Score = 33.7 bits (77), Expect = 0.045
 Identities = 28/110 (25%), Positives = 48/110 (43%), Gaps = 15/110 (13%)

Query: 26  PIALILHPHPRFGGTMNDNIVYQLFYLFQQRGFVSLRFNFRGIGRS---EGEFDYGDGEL 82
           PI L+LH  P    +    I          RG+  +  + RG G S       +Y   EL
Sbjct: 45  PIVLLLHGFPESWYSWRHQIP-----GLASRGYRVIAPDLRGYGFSDAPPHISEYTIDEL 99

Query: 83  -SDAAAALDWVQSLNPESKSCWIAGYSFGAWISMQLLMRRPE-INGFISV 130
             D  A LD +       K  ++ G+ +GA ++ +L +  PE ++G +++
Sbjct: 100 VGDIVALLDHL-----GLKKAFLVGHDWGAIVAWRLALFYPERVDGLVTL 144


>gnl|CDD|39827 KOG4627, KOG4627, KOG4627, Kynurenine formamidase [Amino acid
           transport and metabolism].
          Length = 270

 Score = 32.3 bits (73), Expect = 0.11
 Identities = 12/49 (24%), Positives = 24/49 (48%), Gaps = 2/49 (4%)

Query: 82  LSDAAAALDWVQSLNPESKSCWIAGYSFGAWISMQLLMRR--PEINGFI 128
           ++     ++++      +K     G+S GA ++ Q +MR+  P I G I
Sbjct: 118 MTQFTHGVNFILKYTENTKVLTFGGHSAGAHLAAQAVMRQRSPRIWGLI 166


>gnl|CDD|36765 KOG1552, KOG1552, KOG1552, Predicted alpha/beta hydrolase [General
           function prediction only].
          Length = 258

 Score = 32.2 bits (73), Expect = 0.11
 Identities = 15/70 (21%), Positives = 31/70 (44%), Gaps = 2/70 (2%)

Query: 63  FNFRGIGRSEGEFDYGDGELSDAAAALDWVQSLNPESKSCWIAGYSFGAWISMQLLMRRP 122
           +++ G GRS G+        +D  A  +W+++     +   + G S G   ++ L  R P
Sbjct: 94  YDYSGYGRSSGK-PSERNLYADIKAVYEWLRNRYGSPERIILYGQSIGTVPTVDLASRYP 152

Query: 123 EINGFISVAP 132
            +   +  +P
Sbjct: 153 -LAAVVLHSP 161


>gnl|CDD|32448 COG2267, PldB, Lysophospholipase [Lipid metabolism].
          Length = 298

 Score = 31.9 bits (72), Expect = 0.16
 Identities = 34/138 (24%), Positives = 55/138 (39%), Gaps = 12/138 (8%)

Query: 1   MPEVVFNGPSG-RLEGRYQPSTNPNAPIALILHPHPRFGGTMNDNIVYQLFYLFQQRGFV 59
             E  F G  G RL  R   +  P   + +++H     G   +     +L      RGF 
Sbjct: 9   RTEGYFTGADGTRLRYRTWAAPEPPKGVVVLVH-----GLGEHSGRYEELADDLAARGFD 63

Query: 60  SLRFNFRGIGRSE----GEFDYGDGELSDAAAALDWVQSLNPESKSCWIAGYSFGAWISM 115
               + RG GRS     G  D     + D  A ++ +   +P     ++ G+S G  I++
Sbjct: 64  VYALDLRGHGRSPRGQRGHVDSFADYVDDLDAFVETIAEPDPGLPV-FLLGHSMGGLIAL 122

Query: 116 QLLMRRPE-INGFISVAP 132
             L R P  I+G +  +P
Sbjct: 123 LYLARYPPRIDGLVLSSP 140



 Score = 28.8 bits (64), Expect = 1.1
 Identities = 17/63 (26%), Positives = 24/63 (38%), Gaps = 9/63 (14%)

Query: 150 LIINGSNDTVATTSDVKDLVNKLMNQKGISITHKVIPDANHFFIGKVDELINECAHYLDN 209
           L++ G +D V    +V+ L              KVIP A H       EL+NE     + 
Sbjct: 232 LLLQGGDDRV--VDNVEGLARFFERAGSPDKELKVIPGAYH-------ELLNEPDRAREE 282

Query: 210 SLD 212
            L 
Sbjct: 283 VLK 285


>gnl|CDD|146096 pfam03289, Pox_I1, Poxvirus protein I1. 
          Length = 312

 Score = 30.0 bits (68), Expect = 0.48
 Identities = 19/68 (27%), Positives = 27/68 (39%), Gaps = 21/68 (30%)

Query: 163 SDVKDLVNKLMNQKGISITHKVIPDANHFFIG---------KVDELINECAHYLDNSLDE 213
           SDVK L N+L               A+ F            K++ELIN+        LDE
Sbjct: 126 SDVKTLANRLKT------------SASSFEFNGHTYVLENDKIEELINQLVKNGAIILDE 173

Query: 214 KFTLLKSI 221
           K ++  S+
Sbjct: 174 KSSIKDSM 181


>gnl|CDD|33312 COG3509, LpqC, Poly(3-hydroxybutyrate) depolymerase [Secondary
           metabolites biosynthesis, transport, and catabolism].
          Length = 312

 Score = 29.6 bits (66), Expect = 0.71
 Identities = 12/60 (20%), Positives = 25/60 (41%)

Query: 103 WIAGYSFGAWISMQLLMRRPEINGFISVAPQPKSYDFSFLAPCPSSGLIINGSNDTVATT 162
           ++ G S G  ++ +L    P+I   I+      +   +   P P S +  +G+ D +   
Sbjct: 147 YVTGLSNGGRMANRLACEYPDIFAAIAPVAGLLALGVACTPPRPVSVMAFHGTADPLNPY 206


>gnl|CDD|31002 COG0657, Aes, Esterase/lipase [Lipid metabolism].
          Length = 312

 Score = 28.4 bits (62), Expect = 1.6
 Identities = 23/110 (20%), Positives = 40/110 (36%), Gaps = 10/110 (9%)

Query: 16  RYQPSTNPNAPIALILHPHPR-FGGTMNDNIVYQLFYLFQQRGFVSLRFNFRGIGRSEGE 74
            Y+P     A   ++L+ H   +           +  L    G V +  ++R     E  
Sbjct: 68  VYRPDRKAAATAPVVLYLHGGGWVLGSLRTHDALVARLAAAAGAVVVSVDYRLA--PEHP 125

Query: 75  FDYGDGELSDAAAALDWVQSLNPE----SKSCWIAGYSFGAWISMQLLMR 120
           F      L DA AA  W+++   E         +AG S G  +++ L + 
Sbjct: 126 F---PAALEDAYAAYRWLRANAAELGIDPSRIAVAGDSAGGHLALALALA 172


>gnl|CDD|30827 COG0479, FrdB, Succinate dehydrogenase/fumarate reductase, Fe-S
           protein subunit [Energy production and conversion].
          Length = 234

 Score = 27.9 bits (62), Expect = 2.3
 Identities = 11/51 (21%), Positives = 20/51 (39%), Gaps = 4/51 (7%)

Query: 145 CPSSGLIINGSNDTVATTSDVKDLVN---KLMNQKGISITHKVIPDANHFF 192
           C S  + ING    +A  + +KDL      +       +   ++ D   F+
Sbjct: 58  CGSCAMNINGKP-RLACKTLMKDLEEGVITIEPLPNFPVIRDLVVDMEEFY 107


>gnl|CDD|99984 cd03813, GT1_like_3, This family is most closely related to the GT1
           family of glycosyltransferases. Glycosyltransferases
           catalyze the transfer of sugar moieties from activated
           donor molecules to specific acceptor molecules, forming
           glycosidic bonds. The acceptor molecule can be a lipid,
           a protein, a heterocyclic compound, or another
           carbohydrate residue. This group of glycosyltransferases
           is most closely related to the previously defined
           glycosyltransferase family 1 (GT1). The members of this
           family may transfer UDP, ADP, GDP, or CMP linked sugars.
           The diverse enzymatic activities among members of this
           family reflect a wide range of biological functions. The
           protein structure available for this family has the GTB
           topology, one of the two protein topologies observed for
           nucleotide-sugar-dependent glycosyltransferases. GTB
           proteins have distinct N- and C- terminal domains each
           containing a typical Rossmann fold. The two domains have
           high structural homology despite minimal sequence
           homology. The large cleft that separates the two domains
           includes the catalytic center and permits a high degree
           of flexibility. The members of this family are found
           mainly in bacteria, while some of them are also found in
           Archaea and eukaryotes..
          Length = 475

 Score = 27.6 bits (62), Expect = 2.9
 Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 6/35 (17%)

Query: 164 DVKDLVNKLMNQKGISITHKVIPDANHFFIGKVDE 198
           D+K  +      +  +I  K IPDA  + IG  DE
Sbjct: 307 DIKTFI------RAAAIVRKKIPDAEGWVIGPTDE 335


>gnl|CDD|145081 pfam01738, DLH, Dienelactone hydrolase family. 
          Length = 216

 Score = 27.7 bits (62), Expect = 2.9
 Identities = 20/118 (16%), Positives = 37/118 (31%), Gaps = 14/118 (11%)

Query: 82  LSDAAAALDWVQSLNPESKSCWIA--GYSFGAWISMQLLMRRPEINGFIS-----VAPQP 134
           + D  AA+++++   P   +  +   G+  G  ++   L  R  ++  +S         P
Sbjct: 79  VDDLLAAINYLRGQ-PYVDTKKVGVVGFCLGGRLAFL-LAARNGVDAAVSFYGGLPPEPP 136

Query: 135 KSYDFSFLAPCPSSGLIINGSNDTVATTSDVKDLVNKLMNQKGISITHKVIPDANHFF 192
                +  AP     L   G  D          L    +    +       P A H F
Sbjct: 137 LDEAPAIKAPI----LAHFGEEDPFVPAEARDLLEEA-LRAANVDHELHWYPGAGHAF 189


>gnl|CDD|143440 cd07122, ALDH_F20_ACDH, Coenzyme A acylating aldehyde dehydrogenase
           (ACDH), ALDH family 20-like.  Coenzyme A acylating
           aldehyde dehydrogenase (ACDH, EC=1.2.1.10), an NAD+ and
           CoA-dependent acetaldehyde dehydrogenase, functions as a
           single enzyme (such as the Ethanolamine utilization
           protein, EutE, in Salmonella typhimurium) or as part of
           a multifunctional enzyme to convert acetaldehyde into
           acetyl-CoA . The E. coli aldehyde-alcohol dehydrogenase
           includes the functional domains, alcohol dehydrogenase
           (ADH), ACDH, and pyruvate-formate-lyase deactivase; and
           the Entamoeba histolytica aldehyde-alcohol dehydrogenase
           2 (ALDH20A1) includes the functional domains ADH and
           ACDH and may be critical enzymes in the fermentative
           pathway.
          Length = 436

 Score = 26.3 bits (59), Expect = 6.6
 Identities = 14/30 (46%), Positives = 14/30 (46%), Gaps = 12/30 (40%)

Query: 19  PSTNP------NAPIAL------ILHPHPR 36
           PSTNP       A IAL      I  PHPR
Sbjct: 104 PSTNPTSTAIFKALIALKTRNAIIFSPHPR 133


>gnl|CDD|32977 COG3164, COG3164, Predicted membrane protein [Function unknown].
          Length = 1271

 Score = 26.4 bits (58), Expect = 6.8
 Identities = 11/36 (30%), Positives = 13/36 (36%), Gaps = 4/36 (11%)

Query: 81   ELSDAAAALD----WVQSLNPESKSCWIAGYSFGAW 112
            E S     +D       SL    K CW+ G  FG  
Sbjct: 982  EDSSPLPTVDPNFRSWPSLQLRCKDCWLGGQKFGRI 1017


>gnl|CDD|37069 KOG1858, KOG1858, KOG1858, Anaphase-promoting complex (APC), subunit
            1 (meiotic check point regulator/Tsg24) [Cell cycle
            control, cell division, chromosome partitioning,
            Posttranslational modification, protein turnover,
            chaperones].
          Length = 1496

 Score = 26.1 bits (57), Expect = 7.4
 Identities = 11/31 (35%), Positives = 17/31 (54%)

Query: 14   EGRYQPSTNPNAPIALILHPHPRFGGTMNDN 44
             GRY  ST+  +  AL++   P F  + +DN
Sbjct: 1246 GGRYTISTSNLSIAALLISLFPHFPISPSDN 1276


>gnl|CDD|173812 cd07487, Peptidases_S8_1, Peptidase S8 family domain,
           uncharacterized subfamily 1.  This family is a member of
           the Peptidases S8 or Subtilases serine endo- and
           exo-peptidase clan. They have an Asp/His/Ser catalytic
           triad similar to that found in trypsin-like proteases,
           but do not share their three-dimensional structure and
           are not homologous to trypsin. The stability of
           subtilases may be enhanced by calcium, some members have
           been shown to bind up to 4 ions via binding sites with
           different affinity. Some members of this clan contain
           disulfide bonds. These enzymes can be intra- and
           extracellular, some function at extreme temperatures and
           pH values.
          Length = 264

 Score = 26.0 bits (58), Expect = 8.1
 Identities = 10/21 (47%), Positives = 11/21 (52%)

Query: 76  DYGDGELSDAAAALDWVQSLN 96
           D G G  SD  A +DWV   N
Sbjct: 82  DSGSGSESDIIAGIDWVVENN 102


>gnl|CDD|32453 COG2272, PnbA, Carboxylesterase type B [Lipid metabolism].
          Length = 491

 Score = 26.1 bits (57), Expect = 8.2
 Identities = 23/120 (19%), Positives = 44/120 (36%), Gaps = 14/120 (11%)

Query: 24  NAPIALILHPHPRFGGTMNDNIVYQLFYLFQQRGFVSLRFNFR-------GIGRSEGEFD 76
             P+ + +H      G+ ++ + Y    L  +   V +  N+R        +   + E  
Sbjct: 93  KLPVMVYIHGGGYIMGSGSEPL-YDGSALAARGDVVVVSVNYRLGALGFLDLSSLDTEDA 151

Query: 77  YGDGE-LSDAAAALDWVQ----SLNPESKSCWIAGYSFGAWISMQLLMRRPEINGFISVA 131
           +     L D   AL WV+    +   + ++  + G S GA   +  L+  P   G    A
Sbjct: 152 FASNLGLLDQILALKWVRDNIEAFGGDPQNVTLFGESAGAASILT-LLAVPSAKGLFHRA 210


>gnl|CDD|36437 KOG1223, KOG1223, KOG1223, Isochorismate synthase [Amino acid
           transport and metabolism].
          Length = 508

 Score = 26.1 bits (57), Expect = 8.7
 Identities = 17/64 (26%), Positives = 23/64 (35%), Gaps = 10/64 (15%)

Query: 84  DAAAALDWVQSLNPESKSCWIAGYSF-GAWISMQLL------MRRPEINGFISVAPQPKS 136
           D A A  W +S    S    ++ YS  GA  S ++L      M  PEI    S     + 
Sbjct: 55  DRAKASFWFESQETGSDVSPVSRYSVVGAPPSYEILAKKEDPMVIPEI---GSAFFFVQL 111

Query: 137 YDFS 140
               
Sbjct: 112 VPVL 115


>gnl|CDD|111355 pfam02449, Glyco_hydro_42, Beta-galactosidase.  This group of
           beta-galactosidase enzymes belong to the glycosyl
           hydrolase 42 family. The enzyme catalyses the hydrolysis
           of terminal, non-reducing terminal beta-D-galactosidase
           residues.
          Length = 376

 Score = 26.1 bits (58), Expect = 9.3
 Identities = 8/33 (24%), Positives = 14/33 (42%), Gaps = 9/33 (27%)

Query: 118 LMRRPEINGFISVA--------PQPKSYDFSFL 142
           LM+   +N  + +         P+   YDF +L
Sbjct: 18  LMKEAGVN-VVRLGIFAWAKLEPEEGKYDFGWL 49


  Database: CddA
    Posted date:  Feb 4, 2011  9:38 PM
  Number of letters in database: 6,263,737
  Number of sequences in database:  21,609
  
Lambda     K      H
   0.321    0.139    0.426 

Gapped
Lambda     K      H
   0.267   0.0701    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 21609
Number of Hits to DB: 2,886,764
Number of extensions: 151127
Number of successful extensions: 324
Number of sequences better than 10.0: 1
Number of HSP's gapped: 316
Number of HSP's successfully gapped: 40
Length of query: 225
Length of database: 6,263,737
Length adjustment: 90
Effective length of query: 135
Effective length of database: 4,318,927
Effective search space: 583055145
Effective search space used: 583055145
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 56 (25.4 bits)