HHsearch alignment for GI: 254781094 and conserved domain: COG0018

>COG0018 ArgS Arginyl-tRNA synthetase [Translation, ribosomal structure and biogenesis].
Probab=98.07  E-value=9.7e-05  Score=51.56  Aligned_cols=117  Identities=18%  Similarity=0.287  Sum_probs=93.3

Q ss_pred             HHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Q ss_conf             98719513889999999999855653124677777385683598999999999999999999850253899999998532
Q gi|254781094|r  579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSIC  658 (702)
Q Consensus       579 ~f~~~~~~~~l~~a~KRv~NIL~~~~k~~~~~~~~vd~~Lf~~~~Ek~L~~~~~~~~~~i~~~l~~~dy~~~L~~L~~L~  658 (702)
T Consensus       450 sfeg-Nt~pYvQYA~ARi~SIlrka~e~~~~~~~~~~-~~l~~~~E~~L~~~L~~fp~vl~~aa~~~~Ph~la~YL~~LA  527 (577)
T COG0018         450 SFEG-NTAPYVQYAHARICSILRKAGEDELDLSTEAD-ALLTELEERELVKKLLEFPEVLEEAAEELEPHRLANYLYDLA  527 (577)
T ss_pred             HCCC-CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCC-HHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
T ss_conf             4459-97215999999999999854443455332221-010682799999999984999999998569559999999999


Q ss_pred             HHHHHHHCCCCCCCCC-HHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf             7888751027036886-89999999999999999986068
Q gi|254781094|r  659 EPIEIFFDQVLVNVDD-REVRDNRLSLLQYIKNIILIVIN  697 (702)
Q Consensus       659 ~~Id~FFDnVmVm~eD-~~IR~NRL~LL~~i~~~f~~iaD  697 (702)
T Consensus       528 ~~Fn~fY~~~~Vl~~~~~~~~~aRL~L~~a~~~vL~ngL~  567 (577)
T COG0018         528 GSFNSFYNACPVLGAENEELRAARLALVKATRQVLKNGLD  567 (577)
T ss_pred             HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             9999998508777899578999999999999999997787