HHsearch alignment for GI: 254781094 and conserved domain: COG0751
>COG0751 GlyS Glycyl-tRNA synthetase, beta subunit [Translation, ribosomal structure and biogenesis].
Probab=100.00 E-value=0 Score=1690.53 Aligned_cols=665 Identities=41% Similarity=0.680 Sum_probs=642.2
Q ss_pred CCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCEEEEEECCCCCCCCCEEEEECCCCC-----
Q ss_conf 984016400201698999999999999999999976998033588630745899984954207510023027898-----
Q gi|254781094|r 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGPRV----- 75 (702)
Q Consensus 1 M~~lLlEIgtEElPa~~~~~~~~~l~~~~~~~l~~~~l~~~~i~~~~TPRRLav~i~~l~~~q~d~~~e~kGP~~----- 75 (702)
T Consensus 3 ~~~lLlEigtEELPA~~l~~~~~~l~~~~~~~L~~~~l~~~~v~~f~tPRRLal~v~~la~~q~d~~eE~kGP~~~~a~d 82 (691)
T COG0751 3 MKDLLLEIGTEELPAKALRSAAEQLAKKFTAGLKEAGLSFEGVEVFATPRRLALLVKGLAEAQPDREEEKKGPPVKAAFD 82 (691)
T ss_pred HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCEEEEEECCCCCCCCCHHHHHCCCCCCCCCC
T ss_conf 45579985412178798999999999999999998497711207831771455420476101645466612875014333
Q ss_pred --CCCCHHHHHHHHHCCCCHHHHHHEEEECCCEEEEEEEEE-CCCCCHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCC
Q ss_conf --589878998999779982443320340698289999991-58850999999999999862898513103776567674
Q gi|254781094|r 76 --GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR-KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISA 152 (702)
Q Consensus 76 --g~pt~A~~GF~ks~gi~~~~~~~i~~~~~kg~~~~~~~~-~~g~~~~eiL~~ii~~~i~~l~~pKsMrWg~~~~~~~~ 152 (702)
T Consensus 83 ~~g~~TkA~eGF~r~~Gvs-~e~~~~~~~~k~G~~y~~~~~~~~g~~t~~iL~~i~~~~i~~l~~pK~MrWg~~~----- 156 (691)
T COG0751 83 ADGKPTKAAEGFARGQGVS-VEDLERRKDDKKGEEYVYRVKKEEGQPTEELLPEIVPEAIASLPFPKSMRWGSKD----- 156 (691)
T ss_pred CCCCCCHHHHHHHHHCCCC-HHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCEEECCCC-----
T ss_conf 5899379999999877999-8994343027788589999850578718999999999999759898750457987-----
Q ss_pred EEEEEECCEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEECHHHHHHHHCCCCEEECHHHHHHHHHHHH
Q ss_conf 16653032056786367778723102445822111102234457785663167999986202784716999999999999
Q gi|254781094|r 153 FSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 (702)
Q Consensus 153 ~~FvRPirwIvaLl~~~~~~~~vi~~~~~gi~s~n~T~GHRf~~~~~i~I~~a~~Y~~~L~~~~Vi~d~~~R~~~I~~~i 232 (702)
T Consensus 157 ~~fiRPi~~iv~L~-----g~evip~~i~gi~s~~~s~GHRfl~~~~i~I~~~~~Y~~~L~~~~VI~d~~eRk~~I~~~i 231 (691)
T COG0751 157 VRFIRPIHWIVALL-----GDEVIPFEILGIKSGRITRGHRFLGPGEITIDSADDYVEKLREGKVIADPEERKAIILEQI 231 (691)
T ss_pred EEEECCHHHHHHHH-----CCEEEEEEEEEEEECCCCCCEECCCCCCEEECCHHHHHHHHHHCCEECCHHHHHHHHHHHH
T ss_conf 18853055666660-----8845200451166246332200157886361799999999974877477899999999999
Q ss_pred HHHHHHCCCEECCCHHHHHHHHHHCCCCEEEEEEECHHHHCCCHHHHHHHHHHHCCCEEEECCCCCCCCEEEEEECCCCC
Q ss_conf 99888539821466678878874408984688830777712898999999984001136553688613248985057765
Q gi|254781094|r 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQAS 312 (702)
Q Consensus 233 ~~~a~~~~~~~~~d~~Ll~Ev~~LvE~P~~~~G~F~~~fL~lP~evl~~~m~~hQkyf~~~~~~g~l~~~Fi~v~N~~~~ 312 (702)
T Consensus 232 ~~~a~~~~~~~~~de~LLeEV~~LvE~P~vl~g~Fee~FL~lP~EvlittMk~hQkYFpv~~~~g~L~p~FI~VsN~~~~ 311 (691)
T COG0751 232 EELASKLGGVADIDEDLLEEVTALVEYPTVLLGKFEEKFLELPEEVLITTMKEHQKYFPVFDQGGKLLPHFIFVSNGEPK 311 (691)
T ss_pred HHHHHHCCCEECCCHHHHHHHHHCCCCCHHEEECCCHHHHCCCHHHHHHHHHHCCEEEEEECCCCCCCCCEEEEECCCCC
T ss_conf 99998629862577588999876025770003236699873889999999985553667888998705655999789988
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEHHHHHHHHHHHHHH
Q ss_conf 54302456788997876422599985030001111111111001122013788998842100230313455138998989
Q gi|254781094|r 313 DGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSR 392 (702)
Q Consensus 313 ~~~~~v~~GnerVl~ARL~DA~FF~~~D~~~~~~~~~~~~~~~~~~~dlk~~L~~~~~~L~~~~v~F~~~LGs~~dK~~R 392 (702)
T Consensus 312 d-~~~Ii~GNEKVlraRLsDA~FF~k~D--------------------lk~~L~~~~~kL~--~VtFh~kLGTl~dKv~R 368 (691)
T COG0751 312 D-PENIIEGNEKVLRARLSDAEFFFKED--------------------LKKPLESRLPKLK--TVTFHEKLGTLADKVER 368 (691)
T ss_pred C-HHHHHCCCCEEEEECCCHHHHHHHHH--------------------HCCCHHHHHHHHC--EEEEHHHCCCHHHHHHH
T ss_conf 8-66743166255410103388888755--------------------2056777777541--46513721658899999
Q ss_pred HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCH
Q ss_conf 99999998865299988999999974236788898403457899999998623699889999999734477677788635
Q gi|254781094|r 393 IRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 (702)
Q Consensus 393 i~~la~~la~~l~~~~~~~~rAa~L~KaDL~t~mV~EFpeLQG~mG~~YA~~~ge~~~Va~aI~ehY~P~~~~d~lP~~~ 472 (702)
T Consensus 369 i~~iA~~ia~~l~~d~~~~~rAa~l~KaDL~T~mV~EFpELQGiMG~~YA~~~Ge~~~VA~Ai~EhY~Pr~~gd~lP~t~ 448 (691)
T COG0751 369 IKKIAAYIAPQLGADVEDADRAALLAKADLVTEMVGEFPELQGIMGEYYALHDGEDEEVALAIEEHYLPRFAGDELPSTP 448 (691)
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCH
T ss_conf 99999999987285799999999997465667665588155377779999876998899999998438888898899853
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH---------------HHHHHH
Q ss_conf 88999999749989876510567687769688887434468999837997887896303---------------649999
Q gi|254781094|r 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---------------QNLILF 537 (702)
Q Consensus 473 ~g~ilsiaDKlDtl~g~f~ig~~PTGS~DPfaLRR~a~GiirIl~e~~l~l~l~~li~~---------------~~l~~F 537 (702)
T Consensus 449 ~g~~valADKLDTLvg~F~iG~iPtGSkDPyALRRaAlGiirIi~~~~l~l~l~~ll~~~~~~~~~~~~~~~~~~~l~~F 528 (691)
T COG0751 449 VGAVVALADKLDTLVGFFGIGLIPTGSKDPYALRRAALGILRIILEKNLDLDLEELLDKAVASFKSKLTNAKVLEELLDF 528 (691)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHH
T ss_conf 77899999888788898854677589999588889986799999971799889999999999864430240039999999
Q ss_pred HHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH
Q ss_conf 99999998763388878998854168999899999999999987195138899999999998556531246777773856
Q gi|254781094|r 538 FHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQ 617 (702)
Q Consensus 538 i~~Rl~~~L~e~G~~~DiI~AVl~~~~~~~~~i~~r~~aL~~f~~~~~~~~l~~a~KRv~NIL~~~~k~~~~~~~~vd~~ 617 (702)
T Consensus 529 ~~~Rl~~~l~d~g~~~dii~AVL~~~~~~l~~i~~r~~al~~f~~~~~~~~l~~a~kRv~nIl~k~~~---~~~~~v~~~ 605 (691)
T COG0751 529 FLGRLRTYLQDEGYRKDIIDAVLALNPTDLLDIIARAEALQEFLDLPEAKALAAANKRVSNILAKAEK---KLSGTVDPS 605 (691)
T ss_pred HHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC---CCCCCCCHH
T ss_conf 99999999872599889999997479997799999999999986292158999999899999873455---567766967
Q ss_pred HHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 83598999999999999999999850253899999998532788875102703688689999999999999999986068
Q gi|254781094|r 618 YLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVIN 697 (702)
Q Consensus 618 Lf~~~~Ek~L~~~~~~~~~~i~~~l~~~dy~~~L~~L~~L~~~Id~FFDnVmVm~eD~~IR~NRL~LL~~i~~~f~~iaD 697 (702)
T Consensus 606 Lf~~~~E~~L~~a~~~~~~~~~~a~a~~~y~~al~~L~~L~~pId~FFd~VmVm~eD~~iR~NRLalL~~l~~~f~~vAd 685 (691)
T COG0751 606 LFEEDAEKALFEALQALKPKVAEALAEKDYQDALAALAELRPPIDEFFDNVMVMAEDEALRNNRLALLSKLRELFLKVAD 685 (691)
T ss_pred HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 85288999999999997777888874235999999999854269998567266478789999999999999999998724
Q ss_pred HHHCC
Q ss_conf 45219
Q gi|254781094|r 698 VQKIV 702 (702)
Q Consensus 698 fs~Lv 702 (702)
T Consensus 686 ~~~l~ 690 (691)
T COG0751 686 FSLLV 690 (691)
T ss_pred HHHHC
T ss_conf 99851