HHsearch alignment of GI: 254781094 and MMDB domain: 2qgs_A_1-128
>2qgs_A (A:1-128) Protein Se1688; alpha-helical protein, structural genomics, PSI-2, protein structure initiative; 2.00A {Staphylococcus epidermidis atcc 12228}
Probab=97.45 E-value=0.00091 Score=44.46 Aligned_cols=118 Identities=14% Similarity=0.012 Sum_probs=88.3
Q ss_pred HHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
Q ss_conf 899884210023031345513899898999999998865299-9889999999742367888984034578999999986
Q gi|254781094|r 365 LDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA-DVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAV 443 (702)
Q Consensus 365 L~~~~~~L~~~~v~F~~~LGs~~dK~~Ri~~la~~la~~l~~-~~~~~~rAa~L~KaDL~t~mV~EFpeLQG~mG~~YA~ 443 (702)
+.+.++.+.+ ....+..-+..++-+.|+..+|..|+..++. +.+.+..||.|--...+. ...+.+...||...+.
T Consensus 6 ~l~~~~~l~~-~~~~~~~~~~~~~Hs~~Va~la~~la~~l~~~~~~ll~~aaLlHDiG~~~---~~~~~~~~~~~~~~l~ 81 (128)
T 2qgs_A 6 KIKKAYEYXK-SFHQHDTTGHDIAHVERVYNNACYIAKRENITDTLVIELSSLLHDTVDSK---LTDEILAYDQLKQFLS 81 (128)
T ss_dssp HHHHHHHHHH-HHTTTCSSCHHHHHHHHHHHHHHHHHHHTTCSCCHHHHHHHHHTTTTCCS---SSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH-HHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCC---CCCCHHHHHHHHHHHH
T ss_conf 9999999999-99628988778799999999999999884987399999999986214312---3542788999999998
Q ss_pred HCCCCHHHHHHHHH-HHCCCCCC---CCCCCCHHHHHHHHHHHHHHH
Q ss_conf 23699889999999-73447767---778863588999999749989
Q gi|254781094|r 444 LQNENISCCDAIEE-HLKPRGPL---ENVPTNKISITVSLADKLDTL 486 (702)
Q Consensus 444 ~~ge~~~Va~aI~e-hY~P~~~~---d~lP~~~~g~ilsiaDKlDtl 486 (702)
..|.+.++..++.. +..++..| ..-|.+..|.||++||++|.|
T Consensus 82 ~~~~~~~~~~~i~~~~hh~~~~g~g~p~~~~~~~a~Iv~~AD~~dal 128 (128)
T 2qgs_A 82 TLDLSSEISQQVLYIIKHXSYRAGKNNHVKLSIDGEIVRDADRLDAI 128 (128)
T ss_dssp TTTCCHHHHHHHHHHHHTTC-------CCCCCHHHHHHHHHHHHTTS
T ss_pred HCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHC
T ss_conf 87989999999999999701457888899857788898810378763