HHsearch results for GI: 254781094 and protein with PDBid: 1iq0_A
>1iq0_A Arginyl-tRNA synthetase; riken structural genomics/proteomics initiative, RSGI, structural genomics, ligase; 2.30A {Thermus thermophilus} SCOP: a.27.1.1 c.26.1.1 d.67.2.1
Probab=97.42 E-value=0.0028 Score=40.05 Aligned_cols=107 Identities=17% Similarity=0.224 Sum_probs=85.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Q ss_conf 19513889999999999855653124677777385683598999999999999999999850253899999998532788
Q gi|254781094|r 582 SSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPI 661 (702)
Q Consensus 582 ~~~~~~~l~~a~KRv~NIL~~~~k~~~~~~~~vd~~Lf~~~~Ek~L~~~~~~~~~~i~~~l~~~dy~~~L~~L~~L~~~I 661 (702)
+.+.+.-+.=+|-|+.+|+.+..... ..+.. +.++.|++|...+..+...+..+.....-......|.+|...-
T Consensus 466 ~g~t~~YiqYa~AR~~SIlrKa~~~~-----~~~~~-~~~~~E~~L~~~l~~f~~~v~~a~~~~~P~~l~~Yl~~La~~f 539 (592)
T 1iq0_A 466 EGDTGPYVQYAHARAHSILRKAGEWG-----APDLS-QATPYERALALDLLDFEEAVLEAAEERTPHVLAQYLLDLAASW 539 (592)
T ss_dssp SSSSHHHHHHHHHHHHHHHHHHCCCC-----CCCGG-GCCHHHHHHHHHHTTHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHCC-----CCCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
T ss_conf 28929999999999999999754327-----87655-3898999999999758999999998688589999999999999
Q ss_pred HHHHC-------CCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 87510-------2703688689999999999999999986
Q gi|254781094|r 662 EIFFD-------QVLVNVDDREVRDNRLSLLQYIKNIILI 694 (702)
Q Consensus 662 d~FFD-------nVmVm~eD~~IR~NRL~LL~~i~~~f~~ 694 (702)
+.|.+ +..|..+|+++++.||.|...++..+..
T Consensus 540 ~~fY~~~~~~~~~~~v~~~~~~~~~~RL~L~~a~~~vl~~ 579 (592)
T 1iq0_A 540 NAYYNARENGQPATPVLTAPEGLRELRLSLVQSLQRTLAT 579 (592)
T ss_dssp HHHHHCEETTEESSCSTTSCTTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 9886257666555862068899999999999999999999