HHsearch results for GI: 254781094 and protein with PDBid: 3fnr_A
>3fnr_A Arginyl-tRNA synthetase; transferase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 2.20A {Campylobacter jejuni}
Probab=97.12 E-value=0.0052 Score=38.24 Aligned_cols=107 Identities=16% Similarity=0.204 Sum_probs=80.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 38899999999998556531246777773856835989999999999999999998502538999999985327888751
Q gi|254781094|r 586 GEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFF 665 (702)
Q Consensus 586 ~~~l~~a~KRv~NIL~~~~k~~~~~~~~vd~~Lf~~~~Ek~L~~~~~~~~~~i~~~l~~~dy~~~L~~L~~L~~~Id~FF 665 (702)
+.-+.=++.|+..|+.+....... ....+...+ ++.|.+|...+..+...+..+...-.=......|.+|....+.|.
T Consensus 337 ~~YiqYa~aR~~SIlrk~~~~~~~-~~~~~~~~l-~~~e~~L~~~l~~fp~vl~~a~~~~~P~~l~~Yl~~La~~Fn~fY 414 (464)
T 3fnr_A 337 VYYINYAHARIHQVFAKAGKKIDD-VMKADLQSL-NQDGVNLLFEALNLKAVLNDAFEARALQKIPDYLKNLAANFHKFY 414 (464)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCTTT-STTCCCTTC-CHHHHHHHHHHHTHHHHHHHHHHHTCTTHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCC-CCCCCCCCC-CHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
T ss_conf 789999999999999971534331-112554218-988999999998489999999983781489999999999999887
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 0270368868999999999999999998606
Q gi|254781094|r 666 DQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 (702)
Q Consensus 666 DnVmVm~eD~~IR~NRL~LL~~i~~~f~~ia 696 (702)
++..|..++. ++-||.|...++..+..-.
T Consensus 415 ~~~~Vl~~~~--~~~RL~L~~~~~~vl~~gl 443 (464)
T 3fnr_A 415 NENKVVGSAN--ENDLLKLFSLVALSIKTAF 443 (464)
T ss_dssp HHCCCTTSTT--HHHHHHHHHHHHHHHHHHH
T ss_pred HCCCCCCCCC--HHHHHHHHHHHHHHHHHHH
T ss_conf 1389899979--9999999999999999852