HHsearch results for GI: 254781094 and protein with PDBid: 3hc1_A
>3hc1_A Uncharacterized HDOD domain protein; HDOD domain protein with unknown function, structural genomics; 1.90A {Geobacter sulfurreducens}
Probab=95.55 E-value=0.12 Score=28.85 Aligned_cols=233 Identities=21% Similarity=0.161 Sum_probs=124.2
Q ss_pred EECCCHHHHHHHHHHCCCCEEEEEEECHHHHCCCHHHHHHHHH-HHCCCEEEECCCCCCCCEEEEEECCCCCCCCHHHHH
Q ss_conf 2146667887887440898468883077771289899999998-400113655368861324898505776554302456
Q gi|254781094|r 242 ELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIK-TNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQ 320 (702)
Q Consensus 242 ~~~~d~~Ll~Ev~~LvE~P~~~~G~F~~~fL~lP~evl~~~m~-~hQkyf~~~~~~g~l~~~Fi~v~N~~~~~~~~~v~~ 320 (702)
.+..-+..+-++..+++-|.+=+...- +-..-.+-+-..+++ .|.=||.. .++ |.+. . ...+.-
T Consensus 25 ~LP~lP~v~~~l~~~l~~~~~~~~~la-~~I~~Dp~Lta~lLr~aNSa~y~~---~~~-------I~si--~--~Ai~~L 89 (305)
T 3hc1_A 25 ELPTVPDIVLRIAGKLNDPDVAIDEVA-DLLLQDQVLTARVVHLANSPLYSA---ARP-------ISSI--R--DAVIYL 89 (305)
T ss_dssp SCCCCCHHHHHHHHHTTCTTCCHHHHH-HHHTTCHHHHHHHHHHHHSHHHHT---TSC-------CCSH--H--HHHHHH
T ss_pred CCCCCHHHHHHHHHHHCCCCCCHHHHH-HHHHHCHHHHHHHHHHHCCHHHCC---CCC-------CCCH--H--HHHHHH
T ss_conf 389972999999998749999999999-999989999999999966252189---999-------8989--9--999885
Q ss_pred HHHHHHHHHHHHHH--HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHH
Q ss_conf 78899787642259--9985030001111111111001122013788998842100230313455138998989999999
Q gi|254781094|r 321 GNSRVVAARLEDAL--HFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGK 398 (702)
Q Consensus 321 GnerVl~ARL~DA~--FF~~~D~~~~~~~~~~~~~~~~~~~dlk~~L~~~~~~L~~~~v~F~~~LGs~~dK~~Ri~~la~ 398 (702)
|-+.|-+-=++-+. .| ..+ .-.| .+..+.........++.
T Consensus 90 G~~~v~~lv~~~~~~~~~-~~~-----------------------------------~~~~--~~~~~w~hS~~~A~~a~ 131 (305)
T 3hc1_A 90 GLDLLREAIFTCAIVDLF-KTG-----------------------------------KGPL--NRSTLWAHSLGVARIAK 131 (305)
T ss_dssp HHHHHHHHHHHHHHHHHH-HSC-----------------------------------CCSS--CHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHH-CCC-----------------------------------CCHH--HHHHHHHHHHHHHHHHH
T ss_conf 879999898899999986-467-----------------------------------5302--68999999999999999
Q ss_pred HHHHHCC-CCHHHHHHHHHHHHHHHH-------------HHHHH---------C---CHHHHHHHHHHHHHHCCCCHHHH
Q ss_conf 9886529-998899999997423678-------------88984---------0---34578999999986236998899
Q gi|254781094|r 399 KIAQLID-ADVALVDRAIVLSKADLC-------------TEIVR---------E---FPELQGKIGKEYAVLQNENISCC 452 (702)
Q Consensus 399 ~la~~l~-~~~~~~~rAa~L~KaDL~-------------t~mV~---------E---FpeLQG~mG~~YA~~~ge~~~Va 452 (702)
.+|..++ .+.+.+.-|+.|.-.-.+ ...+. | |---++.+|+.-+++=|.+++++
T Consensus 132 ~lA~~~~~~~~~~a~~aGLLhdiG~l~l~~~~~~~~~~i~~~~~~~~~~~~~~E~~~~g~~h~~ig~~l~~~W~lP~~i~ 211 (305)
T 3hc1_A 132 LIAERTGFLNPVNVYVAGLLHDVGEVFINFFRGKEFSQVVTLVDEEKITFGQAEERLFGTSHCEVGFALAKRWSLNEFIC 211 (305)
T ss_dssp HHHHHTTCSCHHHHHHHHHTTTHHHHHHHHHSHHHHHHHHHHHHHHCCCHHHHHHHHHSSCHHHHHHHHHHHTTCCHHHH
T ss_pred HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHH
T ss_conf 99987378999999999999814999997765798999999986579998999999968799999999999869899999
Q ss_pred HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
Q ss_conf 999997344776777886358899999974998987651056768776968888743446899983799788789630
Q gi|254781094|r 453 DAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 (702)
Q Consensus 453 ~aI~ehY~P~~~~d~lP~~~~g~ilsiaDKlDtl~g~f~ig~~PTGS~DPfaLRR~a~GiirIl~e~~l~l~l~~li~ 530 (702)
++|+.|+.|....++ .....++|.+||.+=...|+-.-|..|...-.|..-+..+.+.++-.+. ..+++...+++
T Consensus 212 ~~i~~hh~p~~~~~~--~~~l~~iv~lA~~l~~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~d~~~l~~ 286 (305)
T 3hc1_A 212 DTILYHHDIEAVPYK--QAAIVAMVAFADEYCTLRRLGFEGHKPVDSVRTLLENHPSWGVIRRSLG-GSDFDEKLIVA 286 (305)
T ss_dssp HHHHHTTCGGGCSSS--CCHHHHHHHHHHHHHHHTTSCCSCCCCCSCHHHHHHHCTHHHHHHHHST-TCCCCHHHHHH
T ss_pred HHHHHHCCCCCCCCC--CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCHHHHHHHHHCC-CCHHHHHHHHH
T ss_conf 999986692327856--1139699999999999808887888877203566530157999997648-52311999999