HHSEARCH alignment of GI: 254781094 and SCOP domain: d1r89a3

Alignment
>d1r89a3 d.58.16.2 (A:258-437) tRNA nucleotidyltransferase, C-terminal domain {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=90.81  E-value=0.43  Score=23.47  Aligned_cols=117  Identities=14%  Similarity=0.160  Sum_probs=86.6

Q ss_pred             EEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCEEEEEECCCCCCCCCEEEEECCCCCCCCCHHHH
Q ss_conf             01640020169899999999999999999997699803358863074589998495420751002302789858987899
Q gi|254781094|r    4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGPRVGAGKKAID   83 (702)
Q Consensus         4 lLlEIgtEElPa~~~~~~~~~l~~~~~~~l~~~~l~~~~i~~~~TPRRLav~i~~l~~~q~d~~~e~kGP~~g~pt~A~~   83 (702)
                      +.++.-+.++|..-+.+-.+-..+.+.+.|..++...=...+++.-.|-.++++ |....-.......|||+-.- .-++
T Consensus        22 ~~v~f~~pd~vdDil~pQl~R~~~sl~~~Le~~GF~Vlrs~~~~de~~~~ll~E-l~~~~lp~v~~h~GPpv~~~-~~~~   99 (180)
T d1r89a3          22 FAVKFRKPDIVDDNLYPQLERASRKIFEFLERENFMPLRSAFKASEEFCYLLFE-CQIKEISRVFRRMGPQFEDE-RNVK   99 (180)
T ss_dssp             EEEEEECCSCCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEECSSEEEEEEE-ESCSCCCSEEEEEEEETTCH-HHHH
T ss_pred             EEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCEEEEEEE-EEECCCCCCEEECCCCCCCC-CHHH
T ss_conf             999948999985322589999999999999987998998788746987999999-74054567263029596210-2288


Q ss_pred             HHHHHCCCCHHHHHHEEEECCCEEEEEEEEECCCCCHHHHHHHHHHH
Q ss_conf             89997799824433203406982899999915885099999999999
Q gi|254781094|r   84 GFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKTIVPV  130 (702)
Q Consensus        84 GF~ks~gi~~~~~~~i~~~~~kg~~~~~~~~~~g~~~~eiL~~ii~~  130 (702)
                      +|..+++.-   -..+    .+|.||..+.+ +-..+.++|.+.+..
T Consensus       100 kFi~k~~~~---g~~I----~~gRl~~~~~R-ky~~a~~~l~~~l~~  138 (180)
T d1r89a3         100 KFLSRNRAF---RPFI----ENGRWWAFEMR-KFTTPEEGVRSYAST  138 (180)
T ss_dssp             HHHHSCCSS---CCEE----ETTEEEEEEEC-SCSSHHHHHHHHHHH
T ss_pred             HHHHHCCCC---CCEE----ECCEEEEEEEE-EECCHHHHHHHHHHH
T ss_conf             887735766---8628----89999999977-507899999999861


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: PAP/Archaeal CCA-adding enzyme, C-terminal domain
family: Archaeal tRNA CCA-adding enzyme
domain: tRNA nucleotidyltransferase, C-terminal domain
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]