HHsearch alignment for GI: 254781095 and conserved domain: COG0812
>COG0812 MurB UDP-N-acetylmuramate dehydrogenase [Cell envelope biogenesis, outer membrane].
Probab=100.00 E-value=0 Score=661.33 Aligned_cols=287 Identities=42% Similarity=0.641 Sum_probs=274.1
Q ss_pred EEEECCCCCCCCCCCCCCEEEEEEEECCHHHHHHHHHHHH-CCCCEEEECCCCEEEEECCCEECCHHHHCCCCCCCEEEE
Q ss_conf 2775488001522576614889999689899999999856-299899984752036604884022022112344311330
Q gi|254781095|r 20 KFQENFPLKQITWFRTGGNAEVMFQPQDIHDLKYFLTLLP-SDIPITIVGLGSNILVRDAGIRGVVLRLSNAGFSNIEVR 98 (318)
Q Consensus 20 ~i~~n~~L~~~tt~rvGG~A~~~~~p~s~~el~~~l~~~~-~~~p~~iiG~GSNil~~D~~~~G~vI~l~~~~~~~i~~~ 98 (318)
T Consensus 2 ~~~~~~~L~~~ttfriGg~A~~~~~~~~~e~l~~~~~~~~~~~~p~~ilG~GSNlLv~d~g~~gvvi~~~~~~~~~~~~~ 81 (291)
T COG0812 2 RIKTNVPLKRYTTFRIGGPAEVLVEPRDIEELKAALKYAKAEDLPVLILGGGSNLLVRDGGIGGVVIKLGKLNFIEIEGD 81 (291)
T ss_pred CCCCCCCCCCCEEEECCCCEEEEEECCCHHHHHHHHHHHHHCCCCEEEEECCCEEEEECCCCCEEEEECCCCCCEEEECC
T ss_conf 74457766663367628540279814899999999986442599879995671489954997669998045662245056
Q ss_pred CCCCCCCCCEEEHHHHHHHHHHHHCCCHHCCCCHHHHHHHHHCCCCCCCCCEEEEEEEEEEEECCCCCEEEECCCCCCCC
Q ss_conf 26651233112215677778875201200038725663243115732158313456664344112321000012334431
Q gi|254781095|r 99 NHCEMIVGARCSGKSLANSALRHGIGGFHFFYGIPGSIGGAAYMNAGANNCETSQYVVEVHGIDRKGNQHVIPREQLKYQ 178 (318)
Q Consensus 99 ~~~~i~v~AG~~~~~l~~~~~~~gl~GlE~l~gIPGTVGGAi~mNAGayG~ei~d~i~~V~~~d~~g~~~~l~~~e~~f~ 178 (318)
T Consensus 82 ~~-~i~a~aG~~~~~l~~~~~~~gl~GlE~l~gIPGsvGgav~mNaGAyG~Ei~d~~~~v~~ld~~G~~~~l~~~el~f~ 160 (291)
T COG0812 82 DG-LIEAGAGAPWHDLVRFALENGLSGLEFLAGIPGSVGGAVIMNAGAYGVEISDVLVSVEVLDRDGEVRWLSAEELGFG 160 (291)
T ss_pred CC-EEEECCCCCHHHHHHHHHHCCCCHHHHHCCCCCCCCHHHHCCCCCCCCCHHEEEEEEEEECCCCCEEEEEHHHHCCC
T ss_conf 78-69990389679999999975972147661799541205530386254101211899999968997999888990964
Q ss_pred CCCCCCCCC-CCEEEEECCCCCCCCCCCHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHCCCCCCCCCCEE
Q ss_conf 002322467-6200100235456543100122210011000155667046588972789851000263186882066778
Q gi|254781095|r 179 YRSSEITKD-LIITHVVLRGFPESQNIISAAIANVCHHRETVQPIKEKTGGSTFKNPTGHSAWQLIEKSGCRGLEFGGAK 257 (318)
Q Consensus 179 YR~S~~~~~-~iIl~a~l~l~~~~~~~i~~~~~~~~~~R~~~qP~~~~s~GSvFkNP~~~~A~~LIe~~GlKG~~iG~a~ 257 (318)
T Consensus 161 YR~S~f~~~~~vvl~v~f~L~~~~~~~I~~~~~~ir~~R~~~qP~~~ps~GS~FKNP~~~~Ag~LIe~aGLKG~~iGgA~ 240 (291)
T COG0812 161 YRTSPFKKEYLVVLSVEFKLTKGDPEDILAAMCAIRRRRELKQPIDLPSAGSFFKNPVGDFAGWLIEEAGLKGYRIGGAQ 240 (291)
T ss_pred CCCCCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCEE
T ss_conf 56676787887999999987789989999999999985347999878998724219996457999997198887467888
Q ss_pred ECCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCEEEECCEEEECCC
Q ss_conf 71567708996899799999999999999999984754004228962168
Q gi|254781095|r 258 ISELHCNFMINADNATGYDLEYLGEQVRKKVFNQSGILLEWEIKRLGDFF 307 (318)
Q Consensus 258 vS~kHanfivN~g~ata~di~~Li~~v~~~V~~~~gi~Le~Ev~~iG~f~ 307 (318)
T Consensus 241 vs~kHanflIN~g~ATa~Dv~~Li~~Vr~~V~e~fGi~LE~Ev~~Ig~~~ 290 (291)
T COG0812 241 VSEKHANFLINTGNATAKDVLDLIEHVRQRVLEKFGIELEPEVKIIGESG 290 (291)
T ss_pred ECHHHCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCC
T ss_conf 75422858997799869999999999999987853816412266514457