HHsearch alignment of GI: 254781095 and MMDB domain: 1n62_C_1-176
>1n62_C (C:1-176) Carbon monoxide dehydrogenase medium chain; CODH, copper, molybdenum, molybdopterin, oxidoreductase; HET: CUB MCN FAD; 1.09A {Oligotropha carboxidovorans OM5}
Probab=99.66 E-value=9.8e-18 Score=131.96 Aligned_cols=160 Identities=14% Similarity=0.105 Sum_probs=129.3
Q ss_pred CEEEEEEEECCHHHHHHHHHHHHCCCCEEEECCCCEEEE--ECCCEE-CCHHHHCCC-CCCCEEEECCCCCCCCCEEEHH
Q ss_conf 148899996898999999998562998999847520366--048840-220221123-4431133026651233112215
Q gi|254781095|r 37 GNAEVMFQPQDIHDLKYFLTLLPSDIPITIVGLGSNILV--RDAGIR-GVVLRLSNA-GFSNIEVRNHCEMIVGARCSGK 112 (318)
Q Consensus 37 G~A~~~~~p~s~~el~~~l~~~~~~~p~~iiG~GSNil~--~D~~~~-G~vI~l~~~-~~~~i~~~~~~~i~v~AG~~~~ 112 (318)
|++..|+.|.|.+|+.+++.... ....++++||++.+ +++..+ +++|++++. .++.++.+++ .+++|||+.+.
T Consensus 3 g~~~~~~~P~s~~el~~ll~~~~--~~~~~~aGGT~l~~~~~~~~~~~~~vI~l~~i~el~~i~~~~~-~l~iGA~~tl~ 79 (176)
T 1n62_C 3 PGSFDYHRPKSIADAVALLTKLG--EDARPLAGGHSLIPIMKTRLATPEHLVDLRDIGDLVGIREEGT-DVVIGAMTTQH 79 (176)
T ss_dssp CCCCEEECCSSHHHHHHHHHHHG--GGEEEESSCTTHHHHHHTTSCCCSEEEECTTCGGGSCEEEETT-EEEEETTCBHH
T ss_pred CCCCCEECCCCHHHHHHHHHHCC--CCCEEEEECCHHHHHHHCCCCCCCEEEECCCCCCCCEEEECCC-EEEEEECCCHH
T ss_conf 89865568899999999998519--9988999455499998648889996998977887755998686-69994056299
Q ss_pred HHHHHHHHHHCCCH--HCCCCHHH-------HHHHHHCCCCCCCCCEEEEEEEEEEEECCCCC-EEEECCCCCCCCCCCC
Q ss_conf 67777887520120--00387256-------63243115732158313456664344112321-0000123344310023
Q gi|254781095|r 113 SLANSALRHGIGGF--HFFYGIPG-------SIGGAAYMNAGANNCETSQYVVEVHGIDRKGN-QHVIPREQLKYQYRSS 182 (318)
Q Consensus 113 ~l~~~~~~~gl~Gl--E~l~gIPG-------TVGGAi~mNAGayG~ei~d~i~~V~~~d~~g~-~~~l~~~e~~f~YR~S 182 (318)
++.+.+...+..+. |++..|++ ||||+++||+++++..+.+....+++...+++ .++++.+|+.++||++
T Consensus 80 ~l~~~~~~~~~~~~l~~~~~~~a~~~vRn~aTiGGni~~~~~~~d~~~~l~al~a~v~~~~~~g~r~~~~~df~~~~~~~ 159 (176)
T 1n62_C 80 ALIGSDFLAAKLPIIRETSLLIADPQIRYMGTIGGNAANGDPGNDMPALMQCLGAAYELTGPEGARIVAARDYYQGAYFT 159 (176)
T ss_dssp HHHHCHHHHHHCHHHHHHHTTSSCHHHHHHCBHHHHHHSCCTTCSHHHHHHHHTCEEEEEETTEEEEEEHHHHEEETTEE
T ss_pred HHHCCHHHHHHCHHHHHHHHHCCCHHHEEEEEECCCCCCCCCCCCCCHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCC
T ss_conf 88609566666769999998528876552202246101578754442045540442487448974224421245773223
Q ss_pred CCCCCCCEEEEECCCCC
Q ss_conf 22467620010023545
Q gi|254781095|r 183 EITKDLIITHVVLRGFP 199 (318)
Q Consensus 183 ~~~~~~iIl~a~l~l~~ 199 (318)
.++.+++|+++++...|
T Consensus 160 ~l~~~eii~~v~ip~~p 176 (176)
T 1n62_C 160 AIEPGELLTAIRIPVPP 176 (176)
T ss_dssp SCCTTCEEEEEEEECCC
T ss_pred CCCCCCEEEEEEECCCC
T ss_conf 35754347999922477