HHsearch results for GI: 254781095 and protein with PDBid: 3js8_A
>3js8_A Cholesterol oxidase; cholsterol, organic solvent stability, oxygen channel, FAD, flavoprotein, oxidoreductase; HET: FAD SUC; 1.54A {Chromobacterium SP}
Probab=99.44 E-value=3.1e-13 Score=102.55 Aligned_cols=163 Identities=11% Similarity=0.096 Sum_probs=114.4
Q ss_pred CCCEEEEEEEECCHHHHHHHHHHHH-CCCCEEEECCCCEEE---EECC--CEECCHHHHCCCCCCCE-EEEC--C-CCCC
Q ss_conf 6614889999689899999999856-299899984752036---6048--84022022112344311-3302--6-6512
Q gi|254781095|r 35 TGGNAEVMFQPQDIHDLKYFLTLLP-SDIPITIVGLGSNIL---VRDA--GIRGVVLRLSNAGFSNI-EVRN--H-CEMI 104 (318)
Q Consensus 35 vGG~A~~~~~p~s~~el~~~l~~~~-~~~p~~iiG~GSNil---~~D~--~~~G~vI~l~~~~~~~i-~~~~--~-~~i~ 104 (318)
+-.....++.|+|++|++++++++. +++++.+.|+|.+.- +.++ .-+|++|.+++ ++.+ +++. + .+|+
T Consensus 26 ~~~~p~~v~~P~s~~dV~~~v~~A~~~~~~v~~rg~GHs~~g~~~~~g~~~~~~ivId~~~--l~~i~~id~~~~~~~Vt 103 (540)
T 3js8_A 26 IKVDDVWTCAPRSADEVVKVANWAKDNGYKVRARGMMHNWSPLTLAAGVSCPAVVLLDTTR--YLTAMSIDASGPVAKVT 103 (540)
T ss_dssp CEEEEEEEECCSSHHHHHHHHHHHHHHTCEEEEECSCCCSSCSSCCTTCSSCSEEEEETTT--TCCCEEEECSSSSEEEE
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCEEEEEHHH--CCCCEEECCCCCEEEEE
T ss_conf 5578898994699999999999999889809998899676657647876778769999243--78835870667907999
Q ss_pred CCCEEEHHHHHHHHHHHHCCCHHCCCCHHHHHHHHHCCCCCCCC--------------CEEEEEEEEEEEECCCCCEEEE
Q ss_conf 33112215677778875201200038725663243115732158--------------3134566643441123210000
Q gi|254781095|r 105 VGARCSGKSLANSALRHGIGGFHFFYGIPGSIGGAAYMNAGANN--------------CETSQYVVEVHGIDRKGNQHVI 170 (318)
Q Consensus 105 v~AG~~~~~l~~~~~~~gl~GlE~l~gIPGTVGGAi~mNAGayG--------------~ei~d~i~~V~~~d~~g~~~~l 170 (318)
|+||+.|.+|.+++.++|+.=--.-+.-..||||+++.|++.-| +-+.|.|.++++++.||++.++
T Consensus 104 v~aG~~~~~l~~~L~~~Gl~~~~~~~~~~~tvgG~~~~~~~g~g~~~gGG~g~~s~~~G~~~d~V~~~~vVladG~~~~~ 183 (540)
T 3js8_A 104 AQAGITMEALLTGLEKAGLGVTAAPAPGDLTLGGVLAINGHGTAIPAKGERRLAGASYGSISNLVLSLTAVVYDKASGAY 183 (540)
T ss_dssp EETTSBHHHHHHHHHHTTEECSCCCSCSCSBHHHHHHTTCCCCBCCCTTCCCCTTCCSSCGGGGEEEEEEEEEETTTTEE
T ss_pred ECCCCCHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCEEEEEEEECCCCEEEE
T ss_conf 89998999999999982897666788797543786178677456658987765546636463618889999617972068
Q ss_pred -----CCCCCCCCCCCCCCCCCCCEEEEECCCCCC
Q ss_conf -----123344310023224676200100235456
Q gi|254781095|r 171 -----PREQLKYQYRSSEITKDLIITHVVLRGFPE 200 (318)
Q Consensus 171 -----~~~e~~f~YR~S~~~~~~iIl~a~l~l~~~ 200 (318)
...+..+.-+.+.- .-.||++++|++.|.
T Consensus 184 ~~~~~~~~~~~~~~~g~~g-~~GiVt~~tl~~~p~ 217 (540)
T 3js8_A 184 ALRKFARNDPQIAPLLAHV-GRSLIVEATLQAAPN 217 (540)
T ss_dssp EEEEEETTSGGGHHHHTCT-TSSCEEEEEEEEEEC
T ss_pred EECCCCCCHHHHHHHHCCC-CCCEEEEEEEEEECC
T ss_conf 7457778677898653155-320357899998737