HHSEARCH alignment of GI: 254781095 and SCOP domain: d1v97a6

Alignment
>d1v97a6 d.145.1.3 (A:192-414) Xanthine oxidase, domain 3 (?) {Cow (Bos taurus) [TaxId: 9913]}
Probab=98.11  E-value=1.6e-06  Score=58.56  Aligned_cols=161  Identities=16%  Similarity=0.236  Sum_probs=101.5

Q ss_pred             CCCCCCCEEEEEEEECCHHHHHHHHHHHHCCCCEEEECCCCEEEEE--C-CCEECCHHHHCC-CCCCCEEEECCCCCCCC
Q ss_conf             2257661488999968989999999985629989998475203660--4-884022022112-34431133026651233
Q gi|254781095|r   31 TWFRTGGNAEVMFQPQDIHDLKYFLTLLPSDIPITIVGLGSNILVR--D-AGIRGVVLRLSN-AGFSNIEVRNHCEMIVG  106 (318)
Q Consensus        31 tt~rvGG~A~~~~~p~s~~el~~~l~~~~~~~p~~iiG~GSNil~~--D-~~~~G~vI~l~~-~~~~~i~~~~~~~i~v~  106 (318)
                      .++..+|.-..|+.|.|.+|+.+++....   ...++.||+-+++.  . ......+|.+.. ..++.|+..++ .+++|
T Consensus        34 ~~~~~~~~~~~w~~P~sl~ea~~ll~~~~---~a~~vaGGTdl~~~~~~~~~~~~~lIdl~~I~EL~~I~~~~~-~l~IG  109 (223)
T d1v97a6          34 KQLRFEGERVTWIQASTLKELLDLKAQHP---EAKLVVGNTEIGIEMKFKNQLFPMIICPAWIPELNAVEHGPE-GISFG  109 (223)
T ss_dssp             CCEEEECSSCEEEECCSHHHHHHHHHHCT---TCEECSSCTTHHHHHHHSCCCCSEEEECTTCGGGTCEEECSS-EEEEE
T ss_pred             CEEEECCCEEEEECCCCHHHHHHHHHHCC---CCEEEEECCHHHHHHHCCCCCCCEEEECCCCCCCCEEEECCC-EEEEC
T ss_conf             64898798379978898999999997689---987997063599997435578773897034533371675375-17871


Q ss_pred             CEEEHHHHHHHHHHHH----------CCC----HHCCCCHH----HHHHHHHCCCCCCCCCEEEEEE----EEEEEECCC
Q ss_conf             1122156777788752----------012----00038725----6632431157321583134566----643441123
Q gi|254781095|r  107 ARCSGKSLANSALRHG----------IGG----FHFFYGIP----GSIGGAAYMNAGANNCETSQYV----VEVHGIDRK  164 (318)
Q Consensus       107 AG~~~~~l~~~~~~~g----------l~G----lE~l~gIP----GTVGGAi~mNAGayG~ei~d~i----~~V~~~d~~  164 (318)
                      |++.+.++...+.+.-          +..    +...++..    |||||.++ ||-..+ ++.-.+    ..|++...+
T Consensus       110 A~vTl~~l~~~l~~~~~~l~~~~~~~~p~l~~a~~~ias~qIRN~aTiGGNl~-~a~P~s-Dl~p~Llal~A~v~l~~~~  187 (223)
T d1v97a6         110 AACALSSVEKTLLEAVAKLPTQKTEVFRGVLEQLRWFAGKQVKSVASLGGNII-TASPIS-DLNPVFMASGTKLTIVSRG  187 (223)
T ss_dssp             TTCBHHHHHHHHHHHHHHSCGGGCHHHHHHHHHHHTSSCHHHHTTCBHHHHHH-HCCTTC-SSHHHHHHTTCEEEEEETT
T ss_pred             CCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHEEEEEECCHHH-HCCCCC-CHHHHHHHHCEEEEEECCC
T ss_conf             55559999998987654134667665468999999747986845668431222-044244-3258988638499998389


Q ss_pred             CCEEEECCCC-CCCCCCCCCCCCCCCEEEEECCCC
Q ss_conf             2100001233-443100232246762001002354
Q gi|254781095|r  165 GNQHVIPREQ-LKYQYRSSEITKDLIITHVVLRGF  198 (318)
Q Consensus       165 g~~~~l~~~e-~~f~YR~S~~~~~~iIl~a~l~l~  198 (318)
                      | .++++-+| +.-+||.+.++.+.+|+++.+-+.
T Consensus       188 g-~R~ip~~~~F~~g~~kt~L~~~Eii~~I~iP~~  221 (223)
T d1v97a6         188 T-RRTVPMDHTFFPSYRKTLLGPEEILLSIEIPYS  221 (223)
T ss_dssp             E-EEEEECCGGGCCSTTCCSCCTTCEEEEEEEECC
T ss_pred             C-EEEEECHHHHCCCCCCCCCCCCCEEEEEEECCC
T ss_conf             5-399985353425765445899987999991488


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: FAD-binding/transporter-associated domain-like
superfamily: FAD-binding/transporter-associated domain-like
family: CO dehydrogenase flavoprotein N-terminal domain-like
domain: Xanthine oxidase, domain 3 (?)
species: Cow (Bos taurus) [TaxId: 9913]