HHSEARCH alignment of GI: 254781095 and SCOP domain: d1w1oa2

Alignment
>d1w1oa2 d.145.1.1 (A:40-245) Cytokinin dehydrogenase 1 {Maize (Zea mays) [TaxId: 4577]}
Probab=99.61  E-value=3.5e-16  Score=119.70  Aligned_cols=182  Identities=18%  Similarity=0.173  Sum_probs=130.8

Q ss_pred             HCCEEEECCC-CCCCCC-C-C-CCCEEEEEEEECCHHHHHHHHHHHHC----CCCEEEECCCCEEEEECCCEECCHHHHC
Q ss_conf             0662775488-001522-5-7-66148899996898999999998562----9989998475203660488402202211
Q gi|254781095|r   17 LRGKFQENFP-LKQITW-F-R-TGGNAEVMFQPQDIHDLKYFLTLLPS----DIPITIVGLGSNILVRDAGIRGVVLRLS   88 (318)
Q Consensus        17 ~~g~i~~n~~-L~~~tt-~-r-vGG~A~~~~~p~s~~el~~~l~~~~~----~~p~~iiG~GSNil~~D~~~~G~vI~l~   88 (318)
                      ++|+++.+.. ++.++| | + .-.....++.|+|++|+++++++++.    ++|+.+.|+|++.--..-.-++++|.|+
T Consensus         4 ~~g~v~td~~~~~~~~~d~~~~~~~~P~~Vv~P~s~~ev~~iv~~a~~~~~~~~~v~~rggGhs~~g~s~~~~~ividl~   83 (206)
T d1w1oa2           4 LDGKLRTDSNATAAASTDFGNITSALPAAVLYPSSTGDLVALLSAANSTPGWPYTIAFRGRGHSLMGQAFAPGGVVVNMA   83 (206)
T ss_dssp             TTTCEECSHHHHHHTSCCTTCSCCCCCSEEECCSSHHHHHHHHHHHHHCTTCCCCEEEESSCCCSSSTTCCTTSEEEEGG
T ss_pred             CCCEEECCHHHHHHHEECCCCCCCCCCCEEEECCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCEEEECC
T ss_conf             79679829888556378745672569999997698999999999998578998479998999784657404797733102


Q ss_pred             CCCCCC----EEEE-CCCCCCCCCEEEHHHHHHHHHHHHCCCHHCCCCHHHHHHHHHCCCCC-----CCCCEEEEEEEEE
Q ss_conf             234431----1330-26651233112215677778875201200038725663243115732-----1583134566643
Q gi|254781095|r   89 NAGFSN----IEVR-NHCEMIVGARCSGKSLANSALRHGIGGFHFFYGIPGSIGGAAYMNAG-----ANNCETSQYVVEV  158 (318)
Q Consensus        89 ~~~~~~----i~~~-~~~~i~v~AG~~~~~l~~~~~~~gl~GlE~l~gIPGTVGGAi~mNAG-----ayG~ei~d~i~~V  158 (318)
                      +++-..    ++.+ +...++|+||+.|.++.+++.++||.--...+.-..||||++.+|+.     -||. ++|+|.++
T Consensus        84 ~l~~i~~~~~~~id~~~~~v~v~aG~~~~~l~~~l~~~Gl~~~~~~~~~~~tvGG~i~~~g~g~~s~~~G~-~~d~v~~~  162 (206)
T d1w1oa2          84 SLGDAAAPPRINVSADGRYVDAGGEQVWIDVLRASLARGVAPRSWTDYLYLTVGGTLSNAGISGQAFRHGP-QISNVLEM  162 (206)
T ss_dssp             GGGCSSSSCSEEECTTSSEEEEETTCBHHHHHHHHHTTTEEESCCCSSCCSBHHHHHTTCCCSTTHHHHCC-GGGSEEEE
T ss_pred             CCCEEEECEEEEEECCCCEEEEECCEEHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCEECCCCCCC-EEEEEEEE
T ss_conf             34323202147883489789997134624433233213322445785683477643102341011334454-03113478


Q ss_pred             EEECCCCCEEEECCC---CCCCCCCCCCCCCCCCEEEEECCCCCC
Q ss_conf             441123210000123---344310023224676200100235456
Q gi|254781095|r  159 HGIDRKGNQHVIPRE---QLKYQYRSSEITKDLIITHVVLRGFPE  200 (318)
Q Consensus       159 ~~~d~~g~~~~l~~~---e~~f~YR~S~~~~~~iIl~a~l~l~~~  200 (318)
                      ++++.+|++.+++++   |+.+..|.|. ..-.||++++|++.|.
T Consensus       163 evV~~~G~~~~~s~~~~~dl~~a~~g~~-G~~Giit~~tl~l~PA  206 (206)
T d1w1oa2         163 DVITGHGEMVTCSKQLNADLFDAVLGGL-GQFGVITRARIAVEPA  206 (206)
T ss_dssp             EEEETTSCEEEEESSSSHHHHHHHTTCT-TCSEEEEEEEEEEEEC
T ss_pred             EEECCCCCEEEECCCCCHHHHHHHHHCC-CCCEEEEEEEEEEECC
T ss_conf             9994899599988989978997886378-8028579999999859


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: FAD-binding/transporter-associated domain-like
superfamily: FAD-binding/transporter-associated domain-like
family: FAD-linked oxidases, N-terminal domain
domain: Cytokinin dehydrogenase 1
species: Maize (Zea mays) [TaxId: 4577]