Query gi|254781095|ref|YP_003065508.1| UDP-N-acetylenolpyruvoylglucosamine reductase [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 318
No_of_seqs 173 out of 2524
Neff 6.4
Searched_HMMs 13730
Date Wed Jun 1 11:26:02 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254781095.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1hska1 d.145.1.2 (A:15-208) U 100.0 0 0 353.3 11.9 190 5-199 3-194 (194)
2 d1uxya1 d.145.1.2 (A:3-200) Ur 100.0 0 0 351.8 12.8 181 25-206 1-187 (198)
3 d1hska2 d.146.1.1 (A:209-317) 100.0 4.7E-39 3.4E-43 264.3 7.2 109 200-309 1-109 (109)
4 d1uxya2 d.146.1.1 (A:201-342) 100.0 3.1E-34 2.3E-38 233.8 7.1 110 202-315 3-140 (142)
5 d1wvfa2 d.145.1.1 (A:7-242) Fl 99.7 1.9E-16 1.4E-20 121.3 9.5 194 4-201 10-236 (236)
6 d2i0ka2 d.145.1.1 (A:58-273) C 99.6 7.5E-16 5.5E-20 117.6 9.0 162 34-199 26-215 (216)
7 d1w1oa2 d.145.1.1 (A:40-245) C 99.6 3.5E-16 2.5E-20 119.7 6.6 182 17-200 4-206 (206)
8 d1e8ga2 d.145.1.1 (A:6-273) Va 99.5 6.3E-14 4.6E-18 105.4 12.4 132 38-171 65-208 (268)
9 d1f0xa2 d.145.1.1 (A:9-273) D- 99.3 9.8E-12 7.2E-16 91.6 8.5 164 8-177 3-187 (265)
10 d1rm6b2 d.145.1.3 (B:1-216) 4- 98.2 1.7E-06 1.2E-10 58.5 6.8 150 41-195 8-212 (216)
11 d1n62c2 d.145.1.3 (C:1-177) Ca 98.2 7.7E-07 5.6E-11 60.6 4.5 153 41-199 7-176 (177)
12 d1v97a6 d.145.1.3 (A:192-414) 98.1 1.6E-06 1.2E-10 58.6 5.1 161 31-198 34-221 (223)
13 d1ffvc2 d.145.1.3 (C:1-177) Ca 98.0 7.1E-06 5.1E-10 54.5 6.2 150 41-197 7-174 (177)
14 d1t3qc2 d.145.1.3 (C:1-176) Qu 97.8 7.5E-06 5.5E-10 54.4 3.4 149 42-197 8-173 (176)
15 d1jroa4 d.145.1.3 (A:179-345) 97.5 1.9E-05 1.4E-09 51.8 2.3 145 43-195 3-163 (167)
16 d1w23a_ c.67.1.4 (A:) Phosphos 66.2 3 0.00022 18.9 3.7 56 224-287 293-356 (360)
17 d1q7sa_ c.131.1.1 (A:) Bit1 (C 65.7 3.8 0.00028 18.3 4.1 40 28-67 41-81 (117)
18 d1rlka_ c.131.1.1 (A:) Hypothe 61.4 4.6 0.00033 17.8 4.2 50 29-78 41-99 (116)
19 d3erja1 c.131.1.1 (A:2-117) Hy 43.7 8.8 0.00064 16.0 3.9 40 28-67 37-77 (116)
20 d1bjna_ c.67.1.4 (A:) Phosphos 36.6 11 0.00083 15.3 5.8 60 225-293 293-360 (360)
21 d1qz9a_ c.67.1.3 (A:) Kynureni 36.0 12 0.00085 15.2 3.8 54 230-291 345-401 (404)
22 d3c5wc1 d.159.1.3 (C:6-293) Pr 31.0 14 0.001 14.7 2.9 45 33-82 41-88 (288)
23 d2c0ra1 c.67.1.4 (A:2-362) Pho 29.9 15 0.0011 14.6 4.4 57 226-290 296-359 (361)
24 d1hkva1 b.49.2.3 (A:2-45,A:311 23.9 15 0.0011 14.5 1.5 13 141-153 133-145 (181)
25 d1q1ra2 c.3.1.5 (A:115-247) Pu 23.6 13 0.00092 15.0 1.0 32 39-70 13-44 (133)
26 d1rl2a1 b.34.5.3 (A:126-195) C 22.7 18 0.0013 14.0 1.7 38 136-173 24-61 (70)
27 d1usha2 d.159.1.2 (A:26-362) 5 20.0 22 0.0016 13.4 2.4 55 240-294 257-337 (337)
No 1
>d1hska1 d.145.1.2 (A:15-208) Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase (MurB), N-terminal domain {Staphylococcus aureus [TaxId: 1280]}
Probab=100.00 E-value=0 Score=353.33 Aligned_cols=190 Identities=32% Similarity=0.549 Sum_probs=172.3
Q ss_pred HHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCEEEEEEEECCHHHHHHHHHHHH-CCCCEEEECCCCEEEEECCCEECC
Q ss_conf 9999999998750662775488001522576614889999689899999999856-299899984752036604884022
Q gi|254781095|r 5 RISRLLRERGKQLRGKFQENFPLKQITWFRTGGNAEVMFQPQDIHDLKYFLTLLP-SDIPITIVGLGSNILVRDAGIRGV 83 (318)
Q Consensus 5 ~~~~~l~~~~~~~~g~i~~n~~L~~~tt~rvGG~A~~~~~p~s~~el~~~l~~~~-~~~p~~iiG~GSNil~~D~~~~G~ 83 (318)
.+-+.|+.++.+ .+++.|+||++|||||+||+|++|++|+|.+|+.+++++++ +++|++++|+|||++++|.+++|+
T Consensus 3 ~~~~~l~~~l~~--~~i~~~~~L~~~tt~~vGG~a~~~v~p~s~~el~~~~~~a~~~~ip~~v~G~GSNll~~d~~~~g~ 80 (194)
T d1hska1 3 DIYQALQQLIPN--EKIKVDEPLKRYTYTKTGGNADFYITPTKNEEVQAVVKYAYQNEIPVTYLGNGSNIIIREGGIRGI 80 (194)
T ss_dssp HHHHHHHHHSCG--GGEEEEEEGGGTCTTSCCCEEEEEECCSSHHHHHHHHHHHHHTTCCEEEESSCSSEEECTTCEEEE
T ss_pred HHHHHHHHHCCC--CCEEECCCCHHCCEEEECEEEEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCEEE
T ss_conf 899999866683--637827840343271128298899951999999999987564365367860554223577872239
Q ss_pred HHHHCCCCCCCEEEECCCCCCCCCEEEHHHHHHHHHHHHCCCHHCCCCHHHHHHHHHCCCCCCCCCEEEEEEEEEEEECC
Q ss_conf 02211234431133026651233112215677778875201200038725663243115732158313456664344112
Q gi|254781095|r 84 VLRLSNAGFSNIEVRNHCEMIVGARCSGKSLANSALRHGIGGFHFFYGIPGSIGGAAYMNAGANNCETSQYVVEVHGIDR 163 (318)
Q Consensus 84 vI~l~~~~~~~i~~~~~~~i~v~AG~~~~~l~~~~~~~gl~GlE~l~gIPGTVGGAi~mNAGayG~ei~d~i~~V~~~d~ 163 (318)
||++.. +..++..++ .++|+||+.|.++++++.++||+|+||++|||||||||++|||||||.|++|+|.+|+++++
T Consensus 81 vi~l~~--~~~~~~~~~-~v~~~aG~~~~~l~~~~~~~gl~g~e~~~gipgtvGGai~mNaG~yG~ei~d~v~~v~~v~~ 157 (194)
T d1hska1 81 VISLLS--LDHIEVSDD-AIIAGSGAAIIDVSRVARDYALTGLEFACGIPGSIGGAVYMNAGAYGGEVKDCIDYALCVNE 157 (194)
T ss_dssp EEECTT--CCCEEEETT-EEEEETTSBHHHHHHHHHHTTEESCGGGTTCCSBHHHHHHHTCEETTEEHHHHEEEEEEECT
T ss_pred EEEEEC--CCCCCCCCC-EEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCEEEHHHHHCCCCCCCCEEEEEEEEEEEECC
T ss_conf 998202--222224697-69998356317888999861034332427766334545552574168417889999999948
Q ss_pred CCCEEEECCCCCCCCCCCCCCCC-CCCEEEEECCCCC
Q ss_conf 32100001233443100232246-7620010023545
Q gi|254781095|r 164 KGNQHVIPREQLKYQYRSSEITK-DLIITHVVLRGFP 199 (318)
Q Consensus 164 ~g~~~~l~~~e~~f~YR~S~~~~-~~iIl~a~l~l~~ 199 (318)
+|++++++++||+|+||+|.|++ ++||++|+|+|.|
T Consensus 158 ~G~i~~l~~~e~~f~YR~s~~~~~~~iIl~a~f~L~P 194 (194)
T d1hska1 158 QGSLIKLTTKELELDYRNSIIQKEHLVVLEAAFTLAP 194 (194)
T ss_dssp TSCEEEEETTTTTCBTTBCHHHHTTCEEEEEEEECEE
T ss_pred CCCEEEEEHHHCCCCCCCCCCCCCCEEEEEEEEEEEC
T ss_conf 9989998789926307778799999999999999979
No 2
>d1uxya1 d.145.1.2 (A:3-200) Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase (MurB), N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=100.00 E-value=0 Score=351.79 Aligned_cols=181 Identities=24% Similarity=0.310 Sum_probs=160.1
Q ss_pred CCCCCCCCCCCCCEEEEEEEECCHHHHHHHHHHHH-CCCCEEEECCCCEEEEECCCEECCHHHHCCCCCCCEEEECCCCC
Q ss_conf 88001522576614889999689899999999856-29989998475203660488402202211234431133026651
Q gi|254781095|r 25 FPLKQITWFRTGGNAEVMFQPQDIHDLKYFLTLLP-SDIPITIVGLGSNILVRDAGIRGVVLRLSNAGFSNIEVRNHCEM 103 (318)
Q Consensus 25 ~~L~~~tt~rvGG~A~~~~~p~s~~el~~~l~~~~-~~~p~~iiG~GSNil~~D~~~~G~vI~l~~~~~~~i~~~~~~~i 103 (318)
+||++||||||||+|++|++|+|++||.+++++++ +++|+++||+|||+||+|++.+++++++. ..+..++..++..+
T Consensus 1 ~sL~~~~t~~igG~A~~~~~p~s~edl~~~l~~~~~~~~p~~vlG~GSNlL~~d~~~~~vi~~~~-~~~~~~~~~~~~~v 79 (198)
T d1uxya1 1 HSLKPWNTFGIDHNAQHIVCAEDEQQLLNAWQYATAEGQPVLILGEGSNVLFLEDYRGTVIINRI-KGIEIHDEPDAWYL 79 (198)
T ss_dssp CBCGGGSTTCCCCBEEEEEEESSHHHHHHHHHHHHHTTCCEEEESSCTTEEECSCEEEEEEEECC-CCEEEEECSSEEEE
T ss_pred CCCCCCCCCCCCEEEEEEEEECCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCC-CCCEEEECCCCEEE
T ss_conf 98866533776918639999799999999999888769988999515663222323475310023-31002303540499
Q ss_pred CCCCEEEHHHHHHHHHHHHCCCHHCCCCHHHHHHHHHCCCCCCCCCEEEEEEEEEEEEC-CCCCEEEECCCCCCCCCCCC
Q ss_conf 23311221567777887520120003872566324311573215831345666434411-23210000123344310023
Q gi|254781095|r 104 IVGARCSGKSLANSALRHGIGGFHFFYGIPGSIGGAAYMNAGANNCETSQYVVEVHGID-RKGNQHVIPREQLKYQYRSS 182 (318)
Q Consensus 104 ~v~AG~~~~~l~~~~~~~gl~GlE~l~gIPGTVGGAi~mNAGayG~ei~d~i~~V~~~d-~~g~~~~l~~~e~~f~YR~S 182 (318)
+|+||+.|++|++++.++||+|+|||+|||||||||++|||||||.||+|++++|+++| .+|++++++++||+|+||+|
T Consensus 80 ~vgAG~~~~~l~~~~~~~gl~G~E~l~gIPGtvGGai~mNaG~~g~ei~~~l~~V~~v~~~~G~~~~~~~~e~~f~YR~S 159 (198)
T d1uxya1 80 HVGAGENWHRLVKYTLQEGMPGLENLALIPGCVGSSPIQNIGAYGVELQRVCAYVDSVELATGKQVRLTAKECRFGYRDS 159 (198)
T ss_dssp EEETTSBHHHHHHHHHHTTCCSCGGGTTCCSBGGGTTTTTCEETTEEGGGTEEEEEEEETTTTEEEEEETGGGTCBTTBC
T ss_pred EEECCCCHHHHHHHHHHCCCCCCHHHCCCCCCCCHHHHHCCCCCCCCHHHCEEEEEEEECCCCCEEEEECCCCCEECCCC
T ss_conf 98036545899999998388530321426443124555344001465122024467774379968997155562354552
Q ss_pred CCCC----CCCEEEEECCCCCCCCCCCH
Q ss_conf 2246----76200100235456543100
Q gi|254781095|r 183 EITK----DLIITHVVLRGFPESQNIIS 206 (318)
Q Consensus 183 ~~~~----~~iIl~a~l~l~~~~~~~i~ 206 (318)
.|++ ++||++|+|+|.+..+..+.
T Consensus 160 ~f~~~~~~~~iIl~a~f~L~~~~~~~~~ 187 (198)
T d1uxya1 160 IFKHEYQDRFAIVAVGLRLPKEWQPVLT 187 (198)
T ss_dssp GGGTTTTTTEEEEEEEEEEESSCCCCCC
T ss_pred CCCCCCCCCEEEEEEEEEECCCCCCCCC
T ss_conf 0356678988999999997898876688
No 3
>d1hska2 d.146.1.1 (A:209-317) Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain {Staphylococcus aureus [TaxId: 1280]}
Probab=100.00 E-value=4.7e-39 Score=264.26 Aligned_cols=109 Identities=35% Similarity=0.543 Sum_probs=105.2
Q ss_pred CCCCCCHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHCCCCCCCCCCEEECCCCCEEEEECCCCCHHHHHH
Q ss_conf 65431001222100110001556670465889727898510002631868820667787156770899689979999999
Q gi|254781095|r 200 ESQNIISAAIANVCHHRETVQPIKEKTGGSTFKNPTGHSAWQLIEKSGCRGLEFGGAKISELHCNFMINADNATGYDLEY 279 (318)
Q Consensus 200 ~~~~~i~~~~~~~~~~R~~~qP~~~~s~GSvFkNP~~~~A~~LIe~~GlKG~~iG~a~vS~kHanfivN~g~ata~di~~ 279 (318)
+++++|+++|+++.++|+++||.+.||||||||||++.+||||||+|||||+++|+|+||++|||||||.|+|||+|+++
T Consensus 1 G~~~eI~~~m~~~~~~R~~~qP~~~ps~GS~FKNP~~~~A~~LIe~~glkg~~~G~a~vS~kHanfivN~g~ata~di~~ 80 (109)
T d1hska2 1 GKMTEIQAKMDDLTERRESKQPLEYPSCGSVFQRPPGHFAGKLIQDSNLQGHRIGGVEVSTKHAGFMVNVDNGTATDYEN 80 (109)
T ss_dssp CCHHHHHHHHHHHHHHHHHHSCTTSCEECCCBCCCTTSCHHHHHHHTTCTTCEETTEEECSSCTTCEEECSSCCHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCHHHHHHHCCCCCCCCCCEEECCCCCEEEEECCCCCHHHHHH
T ss_conf 98899999999999998415999899750687617997212216432645668499998602563899789999999999
Q ss_pred HHHHHHHHHHHHHCCEEEECCEEEECCCCH
Q ss_conf 999999999998475400422896216835
Q gi|254781095|r 280 LGEQVRKKVFNQSGILLEWEIKRLGDFFDH 309 (318)
Q Consensus 280 Li~~v~~~V~~~~gi~Le~Ev~~iG~f~~~ 309 (318)
|++.||+.|+++|||.||+||++||+| ++
T Consensus 81 Li~~i~~~V~~~~gI~Le~Ev~iiG~~-~~ 109 (109)
T d1hska2 81 LIHYVQKTVKEKFGIELNREVRIIGEH-PK 109 (109)
T ss_dssp HHHHHHHHHHHHHSCCCCBCSEEESCC-CC
T ss_pred HHHHHHHHHHHHHCCCCEECCEEECCC-CC
T ss_conf 999999999998798332724754468-98
No 4
>d1uxya2 d.146.1.1 (A:201-342) Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=100.00 E-value=3.1e-34 Score=233.77 Aligned_cols=110 Identities=29% Similarity=0.390 Sum_probs=95.9
Q ss_pred CCCCHHHHHHCCCCCCCC--CCCCCEEEEEEEECCC--------------------------CCCCHHHHHHCCCCCCCC
Q ss_conf 431001222100110001--5566704658897278--------------------------985100026318688206
Q gi|254781095|r 202 QNIISAAIANVCHHRETV--QPIKEKTGGSTFKNPT--------------------------GHSAWQLIEKSGCRGLEF 253 (318)
Q Consensus 202 ~~~i~~~~~~~~~~R~~~--qP~~~~s~GSvFkNP~--------------------------~~~A~~LIe~~GlKG~~i 253 (318)
|.++++.+.+ .|+++ +|...||||||||||. ..+||||||+|||||+++
T Consensus 3 p~~i~~~v~~---iR~~klPdp~~~~n~GSfFKNPii~~~~~~~l~~~~~~~~~~~~~~~~~Ki~Aa~LIe~~G~Kg~~~ 79 (142)
T d1uxya2 3 PQQVFNAVCH---MRTTKLPDPKVNGNAGAFFKNPVVSAETAKALLSQFPTAPNYPQADGSVKLAAGWLIDQCQLKGMQI 79 (142)
T ss_dssp HHHHHHHHHH---HHHHHSCCTTTSCEEEESBCCCEECHHHHHHHHHHSTTCCEEECTTSCEEECHHHHHHHTTCTTCEE
T ss_pred HHHHHHHHHH---HHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHEEEHHHCCCCCC
T ss_conf 8999999999---9954499965156667543687544899999987287643444689984143122010020278776
Q ss_pred CCEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCEEEECCEEEECCCCHHHHHHH
Q ss_conf 67787156770899689979999999999999999998475400422896216835688863
Q gi|254781095|r 254 GGAKISELHCNFMINADNATGYDLEYLGEQVRKKVFNQSGILLEWEIKRLGDFFDHQIVDAT 315 (318)
Q Consensus 254 G~a~vS~kHanfivN~g~ata~di~~Li~~v~~~V~~~~gi~Le~Ev~~iG~f~~~~~~~~~ 315 (318)
|+|+||++|||||||.|+||++|+++|++.||+.|+++|||.||+||++|| +..+..++.|
T Consensus 80 G~a~vs~kHalvlVN~g~ata~Di~~L~~~I~~~V~~kfgI~LE~E~~iiG-~~~~~~~~~~ 140 (142)
T d1uxya2 80 GGAAVHRQQALVLINEDNAKSEDVVQLAHHVRQKVGEKFNVWLEPEVRFIG-ASGEVSAVET 140 (142)
T ss_dssp TTEEECSSCTTEEEECSSCCHHHHHHHHHHHHHHHHHHHSCCCCBCSEEEE-TTEECCHHHH
T ss_pred CCCEECHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEC-CCCCCCHHHH
T ss_conf 880685324748997899999999999999999999988984057248977-9984698886
No 5
>d1wvfa2 d.145.1.1 (A:7-242) Flavoprotein subunit of p-cresol methylhydroxylase {Pseudomonas putida [TaxId: 303]}
Probab=99.66 E-value=1.9e-16 Score=121.34 Aligned_cols=194 Identities=12% Similarity=0.113 Sum_probs=132.0
Q ss_pred HHHHHHHHHHHHHHCC-EE-EECCCCCCCCC-----CCCCCEEEEEEEECCHHHHHHHHHHH-HCCCCEEEECCCCEEEE
Q ss_conf 7999999999875066-27-75488001522-----57661488999968989999999985-62998999847520366
Q gi|254781095|r 4 GRISRLLRERGKQLRG-KF-QENFPLKQITW-----FRTGGNAEVMFQPQDIHDLKYFLTLL-PSDIPITIVGLGSNILV 75 (318)
Q Consensus 4 ~~~~~~l~~~~~~~~g-~i-~~n~~L~~~tt-----~rvGG~A~~~~~p~s~~el~~~l~~~-~~~~p~~iiG~GSNil~ 75 (318)
+++.+.+.++...+.. .+ ....++++|++ .+....+..++.|+|.+|+++++++| ++++|+.+.|+|+|...
T Consensus 10 ~~~~~~v~~l~~ivG~~~V~~~~~~~~~y~~d~~~~~~~~~~P~~Vv~P~s~eeV~~iv~~a~~~~~~i~~~g~G~s~~~ 89 (236)
T d1wvfa2 10 GEFNKAVQKFRALLGDDNVLVESDQLVPYNKIMMPVENAAHAPSAAVTATTVEQVQGVVKICNEHKIPIWTISTGRNFGY 89 (236)
T ss_dssp HHHHHHHHHHHHHHCGGGEECSHHHHHHHHCCCSSSCGGGGCCSEEEECCSHHHHHHHHHHHHHHTCCEEEESSCCCTTT
T ss_pred HHHHHHHHHHHHHCCCCCEEECHHHHHHHHCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCEECCCCCCCCCC
T ss_conf 99999999999972976399889999777276320135676888899569999999999998717941100234444321
Q ss_pred EC---CCEECCHHHHCCCCCCCE-EEE-CCCCCCCCCEEEHHHHHHHHHHHHCCCHHCCCCHHHHHHHHHC-CCCC----
Q ss_conf 04---884022022112344311-330-2665123311221567777887520120003872566324311-5732----
Q gi|254781095|r 76 RD---AGIRGVVLRLSNAGFSNI-EVR-NHCEMIVGARCSGKSLANSALRHGIGGFHFFYGIPGSIGGAAY-MNAG---- 145 (318)
Q Consensus 76 ~D---~~~~G~vI~l~~~~~~~i-~~~-~~~~i~v~AG~~~~~l~~~~~~~gl~GlE~l~gIPGTVGGAi~-mNAG---- 145 (318)
.. ..-++++|.+++ ++.+ +++ ++..++|+||+.|.++.+++.++|+. +-...+.+.|+||.+. .|++
T Consensus 90 g~~~~~~~~~ividl~~--mn~i~~id~~~~~v~v~aG~~~~~l~~~l~~~g~~-~~~~~~~~~~~gG~i~~~~~~G~~~ 166 (236)
T d1wvfa2 90 GSAAPVQRGQVILDLKK--MNKIIKIDPEMCYALVEPGVTFGQMYDYIQENNLP-VMLSFSAPSAIAGPVGNTMDRGVGY 166 (236)
T ss_dssp TTTSCSSTTCEEEECTT--CCCEEEEETTTTEEEECTTCCHHHHHHHHHHTTCS-EECCCCSSCTTCCHHHHHHTTCBCS
T ss_pred CCCCCCCCEEEEEECCC--CCCHHHHCCCCCCEEHHHHHHHHHHHHHHHHHCCC-CCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 11235551489860110--22101210333101011344433257887642124-2112222232100110011122221
Q ss_pred -CCCCEEEEEEEEEEEECCCCCEEEECCCCC----CCCCCCCCCC---------C-CCCEEEEECCCCCCC
Q ss_conf -158313456664344112321000012334----4310023224---------6-762001002354565
Q gi|254781095|r 146 -ANNCETSQYVVEVHGIDRKGNQHVIPREQL----KYQYRSSEIT---------K-DLIITHVVLRGFPES 201 (318)
Q Consensus 146 -ayG~ei~d~i~~V~~~d~~g~~~~l~~~e~----~f~YR~S~~~---------~-~~iIl~a~l~l~~~~ 201 (318)
.||. +.|+|.++++++++|++.+...... .|..+..... . -.||++++|++.|.+
T Consensus 167 ~~yG~-~~d~v~~levVl~~G~iv~~~~~~~~~~~~~~~~~~~~G~~~~~l~SeGtlGIIt~~tlkl~P~P 236 (236)
T d1wvfa2 167 TPYGE-HFMMQCGMEVVLANGDVYRTGMGGVPGSNTWQIFKWGYGPTLDGMFTQANYGICTKMGFWLMPKP 236 (236)
T ss_dssp STTCB-GGGGEEEEEEECTTSCEEECGGGGSTTCSCTTTCSCCSSCCCHHHHTTSSSCEEEEEEEECEECC
T ss_pred CCCCC-CCCCEEEEEEECCCCCEEEECCCCCCCCCHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEEEECCC
T ss_conf 22333-33211006999289819980896678866788974686865123656462487899999987289
No 6
>d2i0ka2 d.145.1.1 (A:58-273) Cholesterol oxidase {Brevibacterium sterolicum [TaxId: 1702]}
Probab=99.62 E-value=7.5e-16 Score=117.57 Aligned_cols=162 Identities=17% Similarity=0.171 Sum_probs=123.1
Q ss_pred CCCCEEEEEEEECCHHHHHHHHHHHH-CCCCEEEECCCCEEE---EECC-CEE--CCHHHHCCCCCCCE--EEE-CCCCC
Q ss_conf 76614889999689899999999856-299899984752036---6048-840--22022112344311--330-26651
Q gi|254781095|r 34 RTGGNAEVMFQPQDIHDLKYFLTLLP-SDIPITIVGLGSNIL---VRDA-GIR--GVVLRLSNAGFSNI--EVR-NHCEM 103 (318)
Q Consensus 34 rvGG~A~~~~~p~s~~el~~~l~~~~-~~~p~~iiG~GSNil---~~D~-~~~--G~vI~l~~~~~~~i--~~~-~~~~i 103 (318)
.+...+.+++.|+|++|+++++++++ +++|+.+.|+|++.- ..+. ... .+++.++. ++.+ +.+ +...+
T Consensus 26 ~~~~~p~~v~~P~s~edV~~~V~~A~~~~~~v~~~G~Ghs~~g~~~~~~~~~~~~~~~~~l~~--~~~i~~~~d~~~~~v 103 (216)
T d2i0ka2 26 EIMLDATWVCSPKTPQDVVRLANWAHEHDYKIRPRGAMAGWTPLTVEKGANVEKVILADTMTH--LNGITVNTGGPVATV 103 (216)
T ss_dssp SSEEEEEEEECCSSHHHHHHHHHHHHHHTCEEEEECCCCCCCTTSSCTTCCCTTEEEEECTTT--SCCEEEECCSSSCEE
T ss_pred CCCCCCCEEEECCCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCC--CCCCCCCCCCCCCEE
T ss_conf 624687989967989999999999986771599971754456982541357633799995555--456642246666457
Q ss_pred CCCCEEEHHHHHHHHHHHHCCCHHCCCCHHHHHHHHHCCCCCC---------------CCCEEEEEEEEEEEECCCCCEE
Q ss_conf 2331122156777788752012000387256632431157321---------------5831345666434411232100
Q gi|254781095|r 104 IVGARCSGKSLANSALRHGIGGFHFFYGIPGSIGGAAYMNAGA---------------NNCETSQYVVEVHGIDRKGNQH 168 (318)
Q Consensus 104 ~v~AG~~~~~l~~~~~~~gl~GlE~l~gIPGTVGGAi~mNAGa---------------yG~ei~d~i~~V~~~d~~g~~~ 168 (318)
++++|+.|.++.+++.++|+.-..+-..-+.||||++.+|++. ||. ++|+|.++++++.+|++.
T Consensus 104 ~v~aG~~~~~l~~~l~~~g~~l~~~~~~~~~tigG~~~~~~~g~~~~~~gg~g~~~~~yG~-~~d~v~~~~vV~~dG~i~ 182 (216)
T d2i0ka2 104 TAGAGASIEAIVTELQKHDLGWANLPAPGVLSIGGALAVNAHGAALPAVGQTTLPGHTYGS-LSNLVTELTAVVWNGTTY 182 (216)
T ss_dssp EEETTSBHHHHHHHHHHTTEECSSCCSCTTCBHHHHHHTTCCCSCCCCTTCCCCTTCCSSC-GGGGEEEEEEEEECSSSE
T ss_pred EEEEEECHHHHHHHHHHCCCCCCCCCCHHHEEECCCCCCCCCCCCCCCCCCCCCCCCEECC-HHHEEEEEEEEECCCCEE
T ss_conf 8986521235444454148632367871223641566797157411377245456422567-678189899992799899
Q ss_pred E---ECCCCCCCCCCCCCCCCCCCEEEEECCCCC
Q ss_conf 0---012334431002322467620010023545
Q gi|254781095|r 169 V---IPREQLKYQYRSSEITKDLIITHVVLRGFP 199 (318)
Q Consensus 169 ~---l~~~e~~f~YR~S~~~~~~iIl~a~l~l~~ 199 (318)
+ .+++|..+.+|.+... -.||++++|++.|
T Consensus 183 ~~~~~~~~d~~~~~~~~~~g-~giit~~tl~~~P 215 (216)
T d2i0ka2 183 ALETYQRNDPRITPLLTNLG-RCFLTSVTMQAGP 215 (216)
T ss_dssp EEEEEETTSGGGHHHHSCTT-SSCEEEEEEECEE
T ss_pred EECCCCCCCCCHHHHHHCCC-CEEEEEEEEEECC
T ss_conf 94476679803205887487-4899999999758
No 7
>d1w1oa2 d.145.1.1 (A:40-245) Cytokinin dehydrogenase 1 {Maize (Zea mays) [TaxId: 4577]}
Probab=99.61 E-value=3.5e-16 Score=119.70 Aligned_cols=182 Identities=18% Similarity=0.173 Sum_probs=130.8
Q ss_pred HCCEEEECCC-CCCCCC-C-C-CCCEEEEEEEECCHHHHHHHHHHHHC----CCCEEEECCCCEEEEECCCEECCHHHHC
Q ss_conf 0662775488-001522-5-7-66148899996898999999998562----9989998475203660488402202211
Q gi|254781095|r 17 LRGKFQENFP-LKQITW-F-R-TGGNAEVMFQPQDIHDLKYFLTLLPS----DIPITIVGLGSNILVRDAGIRGVVLRLS 88 (318)
Q Consensus 17 ~~g~i~~n~~-L~~~tt-~-r-vGG~A~~~~~p~s~~el~~~l~~~~~----~~p~~iiG~GSNil~~D~~~~G~vI~l~ 88 (318)
++|+++.+.. ++.++| | + .-.....++.|+|++|+++++++++. ++|+.+.|+|++.--..-.-++++|.|+
T Consensus 4 ~~g~v~td~~~~~~~~~d~~~~~~~~P~~Vv~P~s~~ev~~iv~~a~~~~~~~~~v~~rggGhs~~g~s~~~~~ividl~ 83 (206)
T d1w1oa2 4 LDGKLRTDSNATAAASTDFGNITSALPAAVLYPSSTGDLVALLSAANSTPGWPYTIAFRGRGHSLMGQAFAPGGVVVNMA 83 (206)
T ss_dssp TTTCEECSHHHHHHTSCCTTCSCCCCCSEEECCSSHHHHHHHHHHHHHCTTCCCCEEEESSCCCSSSTTCCTTSEEEEGG
T ss_pred CCCEEECCHHHHHHHEECCCCCCCCCCCEEEECCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCEEEECC
T ss_conf 79679829888556378745672569999997698999999999998578998479998999784657404797733102
Q ss_pred CCCCCC----EEEE-CCCCCCCCCEEEHHHHHHHHHHHHCCCHHCCCCHHHHHHHHHCCCCC-----CCCCEEEEEEEEE
Q ss_conf 234431----1330-26651233112215677778875201200038725663243115732-----1583134566643
Q gi|254781095|r 89 NAGFSN----IEVR-NHCEMIVGARCSGKSLANSALRHGIGGFHFFYGIPGSIGGAAYMNAG-----ANNCETSQYVVEV 158 (318)
Q Consensus 89 ~~~~~~----i~~~-~~~~i~v~AG~~~~~l~~~~~~~gl~GlE~l~gIPGTVGGAi~mNAG-----ayG~ei~d~i~~V 158 (318)
+++-.. ++.+ +...++|+||+.|.++.+++.++||.--...+.-..||||++.+|+. -||. ++|+|.++
T Consensus 84 ~l~~i~~~~~~~id~~~~~v~v~aG~~~~~l~~~l~~~Gl~~~~~~~~~~~tvGG~i~~~g~g~~s~~~G~-~~d~v~~~ 162 (206)
T d1w1oa2 84 SLGDAAAPPRINVSADGRYVDAGGEQVWIDVLRASLARGVAPRSWTDYLYLTVGGTLSNAGISGQAFRHGP-QISNVLEM 162 (206)
T ss_dssp GGGCSSSSCSEEECTTSSEEEEETTCBHHHHHHHHHTTTEEESCCCSSCCSBHHHHHTTCCCSTTHHHHCC-GGGSEEEE
T ss_pred CCCEEEECEEEEEECCCCEEEEECCEEHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCEECCCCCCC-EEEEEEEE
T ss_conf 34323202147883489789997134624433233213322445785683477643102341011334454-03113478
Q ss_pred EEECCCCCEEEECCC---CCCCCCCCCCCCCCCCEEEEECCCCCC
Q ss_conf 441123210000123---344310023224676200100235456
Q gi|254781095|r 159 HGIDRKGNQHVIPRE---QLKYQYRSSEITKDLIITHVVLRGFPE 200 (318)
Q Consensus 159 ~~~d~~g~~~~l~~~---e~~f~YR~S~~~~~~iIl~a~l~l~~~ 200 (318)
++++.+|++.+++++ |+.+..|.|. ..-.||++++|++.|.
T Consensus 163 evV~~~G~~~~~s~~~~~dl~~a~~g~~-G~~Giit~~tl~l~PA 206 (206)
T d1w1oa2 163 DVITGHGEMVTCSKQLNADLFDAVLGGL-GQFGVITRARIAVEPA 206 (206)
T ss_dssp EEEETTSCEEEEESSSSHHHHHHHTTCT-TCSEEEEEEEEEEEEC
T ss_pred EEECCCCCEEEECCCCCHHHHHHHHHCC-CCCEEEEEEEEEEECC
T ss_conf 9994899599988989978997886378-8028579999999859
No 8
>d1e8ga2 d.145.1.1 (A:6-273) Vanillyl-alcohol oxidase {Fungus (Penicillium simplicissimum) [TaxId: 69488]}
Probab=99.54 E-value=6.3e-14 Score=105.41 Aligned_cols=132 Identities=16% Similarity=0.106 Sum_probs=97.4
Q ss_pred EEEEEEEECCHHHHHHHHHHHH-CCCCEEEECCCCEEEEECC---CEECCHHHHCCCCCCCE-EEE-CCCCCCCCCEEEH
Q ss_conf 4889999689899999999856-2998999847520366048---84022022112344311-330-2665123311221
Q gi|254781095|r 38 NAEVMFQPQDIHDLKYFLTLLP-SDIPITIVGLGSNILVRDA---GIRGVVLRLSNAGFSNI-EVR-NHCEMIVGARCSG 111 (318)
Q Consensus 38 ~A~~~~~p~s~~el~~~l~~~~-~~~p~~iiG~GSNil~~D~---~~~G~vI~l~~~~~~~i-~~~-~~~~i~v~AG~~~ 111 (318)
.++.++.|+|.+|+++++++|. +++|+.+.|+|+|...... .-++++|.+++ .|+.+ +++ ++..++|+||+.|
T Consensus 65 ~P~~Vv~P~s~~eV~~iv~~a~~~~~~v~~~g~G~~~~~~~~~~~~~~~ividls~-~mn~i~~id~~~~~~~v~aGv~~ 143 (268)
T d1e8ga2 65 LASAIVAPRNVADVQSIVGLANKFSFPLWPISIGRNSGYGGAAPRVSGSVVLDMGK-NMNRVLEVNVEGAYCVVEPGVTY 143 (268)
T ss_dssp CCSEEECCSSHHHHHHHHHHHHHHTCCEEEESSCCCTTTTTTCCSSTTCEEEECTT-TCCCEEEEETTTTEEEECTTCBH
T ss_pred CCCEEEECCCHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCEEECCHH-HHHHHHHCCCCCCHHHHHHHHHH
T ss_conf 88889957989999999999998399878415645556531244467750433066-53232111454301112033405
Q ss_pred HHHHHHHHHHHCCCH---HCCCCHHHHHHHHHCCC---CCCCCCEEEEEEEEEEEECCCCCEEEEC
Q ss_conf 567777887520120---00387256632431157---3215831345666434411232100001
Q gi|254781095|r 112 KSLANSALRHGIGGF---HFFYGIPGSIGGAAYMN---AGANNCETSQYVVEVHGIDRKGNQHVIP 171 (318)
Q Consensus 112 ~~l~~~~~~~gl~Gl---E~l~gIPGTVGGAi~mN---AGayG~ei~d~i~~V~~~d~~g~~~~l~ 171 (318)
.+|..++.++|+.-- +......+++||+..+| .+.||. +.|+|.++++++++|++.+..
T Consensus 144 ~~l~~~l~~~G~~~~~~~~~~~~~~~~i~g~~~~~G~~~~~yG~-~~d~v~~~~vV~~~G~iv~~g 208 (268)
T d1e8ga2 144 HDLHNYLEANNLRDKLWLDVPDLGGGSVLGNAVERGVGYTPYGD-HWMMHSGMEVVLANGELLRTG 208 (268)
T ss_dssp HHHHHHHHHTTCTTTEECCCCSSTTSBHHHHHHTTCBCSSTTCB-TGGGEEEEEEEETTSCEEECG
T ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCC-HHCCCCCEEEEECCCCEEEEC
T ss_conf 88889898776530233322344541474010100256411353-112223289994898289837
No 9
>d1f0xa2 d.145.1.1 (A:9-273) D-lactate dehydrogenase {Escherichia coli [TaxId: 562]}
Probab=99.26 E-value=9.8e-12 Score=91.55 Aligned_cols=164 Identities=14% Similarity=0.135 Sum_probs=109.1
Q ss_pred HHHHHHHHHHC-CEEEEC-CCCCCCCC-CC-CCCEEEEEEEECCHHHHHHHHHHH-HCCCCEEEECCCCEEEE---ECCC
Q ss_conf 99999987506-627754-88001522-57-661488999968989999999985-62998999847520366---0488
Q gi|254781095|r 8 RLLRERGKQLR-GKFQEN-FPLKQITW-FR-TGGNAEVMFQPQDIHDLKYFLTLL-PSDIPITIVGLGSNILV---RDAG 79 (318)
Q Consensus 8 ~~l~~~~~~~~-g~i~~n-~~L~~~tt-~r-vGG~A~~~~~p~s~~el~~~l~~~-~~~~p~~iiG~GSNil~---~D~~ 79 (318)
..|+++..-+. +.+..+ .++..|++ |+ ..+.+..+++|+|.+|+.+++++| ++++|+.+.|+|+++-- ++++
T Consensus 3 ~ll~~L~~ivG~~~Vltd~~~~~~ys~d~s~~~~~p~aVV~P~s~~eV~~iv~~a~~~~~pv~~rGgGTsl~Gg~~p~~g 82 (265)
T d1f0xa2 3 AFLNELARLVGSSHLLTDPAKTARYRKGFRSGQGDALAVVFPGSLLELWRVLKACVTADKIILMQAANTGLTEGSTPNGN 82 (265)
T ss_dssp HHHHHHHHHHCGGGEECCHHHHHHHHBCSSSCBBCCSEEECCSSHHHHHHHHHHHHHTTCEEEEESSCCCSSSTTSCCBS
T ss_pred HHHHHHHHHCCCCCEEECHHHHHHHHCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCC
T ss_conf 99999998659330984889987860653136788778995898999999999998504665402266331045356643
Q ss_pred -E--ECCHHHHCCCCCCCEEEEC-CCCCCCCCEEEHHHHHHHHHHHHCCCHHCCCCHH-----HHHHHHHCCCCCC----
Q ss_conf -4--0220221123443113302-6651233112215677778875201200038725-----6632431157321----
Q gi|254781095|r 80 -I--RGVVLRLSNAGFSNIEVRN-HCEMIVGARCSGKSLANSALRHGIGGFHFFYGIP-----GSIGGAAYMNAGA---- 146 (318)
Q Consensus 80 -~--~G~vI~l~~~~~~~i~~~~-~~~i~v~AG~~~~~l~~~~~~~gl~GlE~l~gIP-----GTVGGAi~mNAGa---- 146 (318)
. ..+++.+++ ++.+...+ ...++|++|+.|.+|.+++..+|+. |....| .||||.+.+|+|.
T Consensus 83 ~~~~~~vv~~~~~--m~~i~~~~~~~~v~v~pGv~~~~L~~~l~~~g~~---~~~~~~~s~~~atiGG~ia~na~G~~~~ 157 (265)
T d1f0xa2 83 DYDRDVVIISTLR--LDKLHVLGKGEQVLAYPGTTLYSLEKALKPLGRE---PHSVIGSSCIGASVIGGICNNSGGSLVQ 157 (265)
T ss_dssp CCSSCEEEEECTT--CCCEEEETTTTEEEECTTCBHHHHHHHHGGGTEE---CSCCCGGGGGTCBHHHHHHTTCCCSCTT
T ss_pred CCCCCEEEEECCC--CCCCEECCCCCCEEEEEEEEHHHHHHHHHHCCCC---CCCCCCCCCCCCEEEEEHHHCCCCCCEE
T ss_conf 4565413565456--5652203554536998514189999988866993---3468885110623113454389876357
Q ss_pred CCCEEEEEEEEEEEECCCCCEEEECCCCCCC
Q ss_conf 5831345666434411232100001233443
Q gi|254781095|r 147 NNCETSQYVVEVHGIDRKGNQHVIPREQLKY 177 (318)
Q Consensus 147 yG~ei~d~i~~V~~~d~~g~~~~l~~~e~~f 177 (318)
+|. ..+.+.....+..+|++..+..-.+++
T Consensus 158 rg~-~~~~~~~~~~v~~~G~~~~~~~l~~~~ 187 (265)
T d1f0xa2 158 RGP-AYTEMSLFARINEDGKLTLVNHLGIDL 187 (265)
T ss_dssp SCS-SCCSCEEEEEECTTSCEEEEECSSBCC
T ss_pred ECC-CHHHHHHHHHHCCCCCEEEECCCHHHH
T ss_conf 756-133568876332589568855434530
No 10
>d1rm6b2 d.145.1.3 (B:1-216) 4-hydroxybenzoyl-CoA reductase beta subunit HrcB, N-terminal domain {Thauera aromatica [TaxId: 59405]}
Probab=98.21 E-value=1.7e-06 Score=58.52 Aligned_cols=150 Identities=16% Similarity=0.248 Sum_probs=97.0
Q ss_pred EEEEECCHHHHHHHHHHHHCCCCEEEECCCCEEEE--ECC-CEECCHHHHCC-CCCCCEEEECCCCCCCCCEEEHHHHHH
Q ss_conf 99996898999999998562998999847520366--048-84022022112-344311330266512331122156777
Q gi|254781095|r 41 VMFQPQDIHDLKYFLTLLPSDIPITIVGLGSNILV--RDA-GIRGVVLRLSN-AGFSNIEVRNHCEMIVGARCSGKSLAN 116 (318)
Q Consensus 41 ~~~~p~s~~el~~~l~~~~~~~p~~iiG~GSNil~--~D~-~~~G~vI~l~~-~~~~~i~~~~~~~i~v~AG~~~~~l~~ 116 (318)
-|+.|+|.+|+.+++. +.+-.++++|+-++. ..+ .-+..+|.+++ ..+..|+..++..++.||++.+.++..
T Consensus 8 ~y~~P~sl~EA~~ll~----~~~a~~lAGGTdL~~~~k~~~~~p~~lIdl~~I~eL~~I~~~~dg~l~IGA~vT~~~l~~ 83 (216)
T d1rm6b2 8 RTHRPATLADAVNALA----AEATLPLGAGTDLLPNLRRGLGHPAALVDLTGIDGLATISTLADGSLRIGAGATLEAIAE 83 (216)
T ss_dssp EEECCSSHHHHHHHTT----STTEEEESSCTTHHHHHHTTSCCCSEEEECTTSTTTTCEEECTTSCEEEETTCBHHHHHH
T ss_pred EEECCCCHHHHHHHHC----CCCCEEEECCCCHHHHHHCCCCCCCCEECHHHHHHHHCCCCCCCCCEEEEEEEEHHHHHH
T ss_conf 5768999999999862----899969977754899984365686510356562655202234687079833235688665
Q ss_pred H-HHHHHCCCHH---CCCCHH-----HHHHHHHCCCCCC---------------------------------CCCEEEEE
Q ss_conf 7-8875201200---038725-----6632431157321---------------------------------58313456
Q gi|254781095|r 117 S-ALRHGIGGFH---FFYGIP-----GSIGGAAYMNAGA---------------------------------NNCETSQY 154 (318)
Q Consensus 117 ~-~~~~gl~GlE---~l~gIP-----GTVGGAi~mNAGa---------------------------------yG~ei~d~ 154 (318)
. .....+..|- -..+=| |||||.+++...| +..-.+|.
T Consensus 84 ~~~l~~~~p~L~~a~~~~as~qIRN~aTiGGNl~~~s~~~~yr~~~~~r~~~~~c~~~~g~~~~~~~~~~~c~a~p~sD~ 163 (216)
T d1rm6b2 84 HDAIRTTWPALAQAAESVAGPTHRAAATLGGNLCQDTRCTFYNQSEWWRSGNGYCLKYKGDKCHVIVKSDRCYATYHGDV 163 (216)
T ss_dssp CHHHHHHSHHHHHHHHHSSCHHHHHHCBHHHHHTCCCBCTTTSSCHHHHHHTTCBTTBBCSCCSSSTTCSSCCCBCCCSH
T ss_pred HHHHHHHHHHHHHHHHHHCCHHHHCCEECCCCCCCCCCCHHHCCCHHCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCHH
T ss_conf 33202256999999998779999687222411466777322057021268887322557863012126764103564106
Q ss_pred E-------EEEEEECCCCCEEEECCCCCCC--CCCCCCCCCCCCEEEEEC
Q ss_conf 6-------6434411232100001233443--100232246762001002
Q gi|254781095|r 155 V-------VEVHGIDRKGNQHVIPREQLKY--QYRSSEITKDLIITHVVL 195 (318)
Q Consensus 155 i-------~~V~~~d~~g~~~~l~~~e~~f--~YR~S~~~~~~iIl~a~l 195 (318)
. -.|++...+| .++++-+|+-. +||.+.++.+.+|+++.+
T Consensus 164 ~p~LlAl~A~v~l~~~~G-~R~vpl~dF~~~~G~~~t~L~~~Eii~~I~i 212 (216)
T d1rm6b2 164 APALMVLDARAEIVGPAG-KRTVPVAQLFRESGAEHLTLEKGELLAAIEV 212 (216)
T ss_dssp HHHHHHTTCEEEEEETTE-EEEEEGGGGBCSCTTSCBCCCTTCEEEEEEE
T ss_pred HHHHHHHCCEEEEECCCC-EEEEEHHHHCCCCCCCCCCCCCCCEEEEEEE
T ss_conf 699987099999975995-3998989930152876534699856999991
No 11
>d1n62c2 d.145.1.3 (C:1-177) Carbon monoxide (CO) dehydrogenase flavoprotein, N-terminal domain {Oligotropha carboxidovorans, formerly Pseudomonas carboxydovorans [TaxId: 40137]}
Probab=98.18 E-value=7.7e-07 Score=60.64 Aligned_cols=153 Identities=16% Similarity=0.209 Sum_probs=99.1
Q ss_pred EEEEECCHHHHHHHHHHHHCCCCEEEECCCCEEEE--ECCC-EECCHHHHCCCC-CCCEEEECCCCCCCCCEEEHHHHHH
Q ss_conf 99996898999999998562998999847520366--0488-402202211234-4311330266512331122156777
Q gi|254781095|r 41 VMFQPQDIHDLKYFLTLLPSDIPITIVGLGSNILV--RDAG-IRGVVLRLSNAG-FSNIEVRNHCEMIVGARCSGKSLAN 116 (318)
Q Consensus 41 ~~~~p~s~~el~~~l~~~~~~~p~~iiG~GSNil~--~D~~-~~G~vI~l~~~~-~~~i~~~~~~~i~v~AG~~~~~l~~ 116 (318)
-|+.|+|.+|+.++++... -...++.+|+.++. .++. .+..+|.+..-. +..|+..++ .+..||.+.+.++..
T Consensus 7 ~y~~P~sl~ea~~ll~~~~--~~a~~laGGT~l~~~~~~~~~~~~~lidl~~i~el~~I~~~~~-~~~iGa~~t~~~~~~ 83 (177)
T d1n62c2 7 DYHRPKSIADAVALLTKLG--EDARPLAGGHSLIPIMKTRLATPEHLVDLRDIGDLVGIREEGT-DVVIGAMTTQHALIG 83 (177)
T ss_dssp EEECCSSHHHHHHHHHHHG--GGEEEESSCTTHHHHHHTTSCCCSEEEECTTCGGGSCEEEETT-EEEEETTCBHHHHHH
T ss_pred CEECCCCHHHHHHHHHHCC--CCCEEEEECCCHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCC-EEEEECCCCHHHHHC
T ss_conf 4638899999999997539--9976998247224325305577653346202523408963585-699703454887521
Q ss_pred HHH-HHHCCCH----HCCCCHH----HHHHHHHCCCCCCCCCEEEEEE----EEEEEECCCCCEEEECCCCCCCCCCCCC
Q ss_conf 788-7520120----0038725----6632431157321583134566----6434411232100001233443100232
Q gi|254781095|r 117 SAL-RHGIGGF----HFFYGIP----GSIGGAAYMNAGANNCETSQYV----VEVHGIDRKGNQHVIPREQLKYQYRSSE 183 (318)
Q Consensus 117 ~~~-~~gl~Gl----E~l~gIP----GTVGGAi~mNAGayG~ei~d~i----~~V~~~d~~g~~~~l~~~e~~f~YR~S~ 183 (318)
... ..-+..+ .+.++.. |||||.++. |-..+ ++.-.+ -.|++...+|+ ++++-+|+--+||.+.
T Consensus 84 ~~~~~~~~p~l~~a~~~~as~qIRn~aTiGGNi~~-a~p~~-D~~~~Llal~A~v~l~~~~G~-R~vpl~dF~~g~~~t~ 160 (177)
T d1n62c2 84 SDFLAAKLPIIRETSLLIADPQIRYMGTIGGNAAN-GDPGN-DMPALMQCLGAAYELTGPEGA-RIVAARDYYQGAYFTA 160 (177)
T ss_dssp CHHHHHHCHHHHHHHTTSSCHHHHHHCBHHHHHHS-CCTTC-SHHHHHHHHTCEEEEEETTEE-EEEEHHHHEEETTEES
T ss_pred CHHHHHHCCHHHHHHHHCCCHHHEEEEEEECCEEC-CCCCC-HHHHHHHHHCCEEEEECCCCE-EEEEHHHHCCCCCCCC
T ss_conf 07676536479999641389427689996153201-45333-268999984031488538835-9989999505603134
Q ss_pred CCCCCCEEEEECCCCC
Q ss_conf 2467620010023545
Q gi|254781095|r 184 ITKDLIITHVVLRGFP 199 (318)
Q Consensus 184 ~~~~~iIl~a~l~l~~ 199 (318)
++.+.+++++.+-..|
T Consensus 161 l~~~Eii~~I~iP~p~ 176 (177)
T d1n62c2 161 IEPGELLTAIRIPVPP 176 (177)
T ss_dssp CCTTCEEEEEEEECCC
T ss_pred CCCCCEEEEEEECCCC
T ss_conf 5989769999965998
No 12
>d1v97a6 d.145.1.3 (A:192-414) Xanthine oxidase, domain 3 (?) {Cow (Bos taurus) [TaxId: 9913]}
Probab=98.11 E-value=1.6e-06 Score=58.56 Aligned_cols=161 Identities=16% Similarity=0.236 Sum_probs=101.5
Q ss_pred CCCCCCCEEEEEEEECCHHHHHHHHHHHHCCCCEEEECCCCEEEEE--C-CCEECCHHHHCC-CCCCCEEEECCCCCCCC
Q ss_conf 2257661488999968989999999985629989998475203660--4-884022022112-34431133026651233
Q gi|254781095|r 31 TWFRTGGNAEVMFQPQDIHDLKYFLTLLPSDIPITIVGLGSNILVR--D-AGIRGVVLRLSN-AGFSNIEVRNHCEMIVG 106 (318)
Q Consensus 31 tt~rvGG~A~~~~~p~s~~el~~~l~~~~~~~p~~iiG~GSNil~~--D-~~~~G~vI~l~~-~~~~~i~~~~~~~i~v~ 106 (318)
.++..+|.-..|+.|.|.+|+.+++.... ...++.||+-+++. . ......+|.+.. ..++.|+..++ .+++|
T Consensus 34 ~~~~~~~~~~~w~~P~sl~ea~~ll~~~~---~a~~vaGGTdl~~~~~~~~~~~~~lIdl~~I~EL~~I~~~~~-~l~IG 109 (223)
T d1v97a6 34 KQLRFEGERVTWIQASTLKELLDLKAQHP---EAKLVVGNTEIGIEMKFKNQLFPMIICPAWIPELNAVEHGPE-GISFG 109 (223)
T ss_dssp CCEEEECSSCEEEECCSHHHHHHHHHHCT---TCEECSSCTTHHHHHHHSCCCCSEEEECTTCGGGTCEEECSS-EEEEE
T ss_pred CEEEECCCEEEEECCCCHHHHHHHHHHCC---CCEEEEECCHHHHHHHCCCCCCCEEEECCCCCCCCEEEECCC-EEEEC
T ss_conf 64898798379978898999999997689---987997063599997435578773897034533371675375-17871
Q ss_pred CEEEHHHHHHHHHHHH----------CCC----HHCCCCHH----HHHHHHHCCCCCCCCCEEEEEE----EEEEEECCC
Q ss_conf 1122156777788752----------012----00038725----6632431157321583134566----643441123
Q gi|254781095|r 107 ARCSGKSLANSALRHG----------IGG----FHFFYGIP----GSIGGAAYMNAGANNCETSQYV----VEVHGIDRK 164 (318)
Q Consensus 107 AG~~~~~l~~~~~~~g----------l~G----lE~l~gIP----GTVGGAi~mNAGayG~ei~d~i----~~V~~~d~~ 164 (318)
|++.+.++...+.+.- +.. +...++.. |||||.++ ||-..+ ++.-.+ ..|++...+
T Consensus 110 A~vTl~~l~~~l~~~~~~l~~~~~~~~p~l~~a~~~ias~qIRN~aTiGGNl~-~a~P~s-Dl~p~Llal~A~v~l~~~~ 187 (223)
T d1v97a6 110 AACALSSVEKTLLEAVAKLPTQKTEVFRGVLEQLRWFAGKQVKSVASLGGNII-TASPIS-DLNPVFMASGTKLTIVSRG 187 (223)
T ss_dssp TTCBHHHHHHHHHHHHHHSCGGGCHHHHHHHHHHHTSSCHHHHTTCBHHHHHH-HCCTTC-SSHHHHHHTTCEEEEEETT
T ss_pred CCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHEEEEEECCHHH-HCCCCC-CHHHHHHHHCEEEEEECCC
T ss_conf 55559999998987654134667665468999999747986845668431222-044244-3258988638499998389
Q ss_pred CCEEEECCCC-CCCCCCCCCCCCCCCEEEEECCCC
Q ss_conf 2100001233-443100232246762001002354
Q gi|254781095|r 165 GNQHVIPREQ-LKYQYRSSEITKDLIITHVVLRGF 198 (318)
Q Consensus 165 g~~~~l~~~e-~~f~YR~S~~~~~~iIl~a~l~l~ 198 (318)
| .++++-+| +.-+||.+.++.+.+|+++.+-+.
T Consensus 188 g-~R~ip~~~~F~~g~~kt~L~~~Eii~~I~iP~~ 221 (223)
T d1v97a6 188 T-RRTVPMDHTFFPSYRKTLLGPEEILLSIEIPYS 221 (223)
T ss_dssp E-EEEEECCGGGCCSTTCCSCCTTCEEEEEEEECC
T ss_pred C-EEEEECHHHHCCCCCCCCCCCCCEEEEEEECCC
T ss_conf 5-399985353425765445899987999991488
No 13
>d1ffvc2 d.145.1.3 (C:1-177) Carbon monoxide (CO) dehydrogenase flavoprotein, N-terminal domain {Hydrogenophaga pseudoflava [TaxId: 47421]}
Probab=97.98 E-value=7.1e-06 Score=54.54 Aligned_cols=150 Identities=12% Similarity=0.214 Sum_probs=97.4
Q ss_pred EEEEECCHHHHHHHHHHHHCCCCEEEECCCCEEEE--ECC-CEECCHHHHCC-CCCCCEEEECCCCCCCCCEEEHHHHHH
Q ss_conf 99996898999999998562998999847520366--048-84022022112-344311330266512331122156777
Q gi|254781095|r 41 VMFQPQDIHDLKYFLTLLPSDIPITIVGLGSNILV--RDA-GIRGVVLRLSN-AGFSNIEVRNHCEMIVGARCSGKSLAN 116 (318)
Q Consensus 41 ~~~~p~s~~el~~~l~~~~~~~p~~iiG~GSNil~--~D~-~~~G~vI~l~~-~~~~~i~~~~~~~i~v~AG~~~~~l~~ 116 (318)
-|+.|+|.+|+.+++...+ -...++++|+.++. ..+ .-+..+|.+.+ ..++.++..++ .+++||++.+.++..
T Consensus 7 ~~~~P~sl~Ea~~ll~~~~--~~a~~laGGTdl~~~~~~~~~~~~~lidl~~i~eL~~I~~~~~-~l~IGA~~t~~~l~~ 83 (177)
T d1ffvc2 7 EYHAPKSVGEAVALLGQLG--SDAKLLAGGHSLLPMMKLRFAQPEHLIDINRIPELRGIREEGS-TVVIGAMTVENDLIS 83 (177)
T ss_dssp EEECCSSHHHHHHHHHHHG--GGEEEESSCTTHHHHHHTTSCCCSEEEECTTCGGGCCEEEETT-EEEEETTCBHHHHHH
T ss_pred EEECCCCHHHHHHHHHHCC--CCCEEEEECCHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCC-EEEEECCEEHHHHHH
T ss_conf 0789899999999997449--9988997076057656425368301007665220356850596-699753678999973
Q ss_pred HHH-HHHCCCH----HCCCCHH-----HHHHHHHCCCCCCCCCEEEEEE----EEEEEECCCCCEEEECCCCCCCCCCCC
Q ss_conf 788-7520120----0038725-----6632431157321583134566----643441123210000123344310023
Q gi|254781095|r 117 SAL-RHGIGGF----HFFYGIP-----GSIGGAAYMNAGANNCETSQYV----VEVHGIDRKGNQHVIPREQLKYQYRSS 182 (318)
Q Consensus 117 ~~~-~~gl~Gl----E~l~gIP-----GTVGGAi~mNAGayG~ei~d~i----~~V~~~d~~g~~~~l~~~e~~f~YR~S 182 (318)
... ..-+..+ ..++. | |||||.++. +-..+. +.-.+ -.|++...+| .++++-+|+--+|+..
T Consensus 84 ~~~~~~~~~~l~~a~~~~as-~qIRn~aTiGGni~~-~~p~~D-~~~~LlAl~A~v~l~~~~g-~r~vpl~df~~g~~~t 159 (177)
T d1ffvc2 84 SPIVQARLPLLAEAAKLIAD-PQVRNRGTIGGDIAH-GDPGND-HPALSIAVEAHFVLEGPNG-RRTVPADGFFLGTYMT 159 (177)
T ss_dssp CHHHHHHCHHHHHHGGGSSC-TTGGGTCBHHHHHHT-CCTTCS-HHHHHHHTTCEEEEEETTE-EEEEESTTTEEETTEE
T ss_pred CCCCCHHHHHHHHHHHCCCC-HHHEEEEEECCCEEE-CCCCCC-HHHHHHHHCCEEEEECCCC-EEEEEHHHHCCCCCCC
T ss_conf 92101578999999853589-215689985363665-134441-3679986234389976995-6998999942574525
Q ss_pred CCCCCCCEEEEECCC
Q ss_conf 224676200100235
Q gi|254781095|r 183 EITKDLIITHVVLRG 197 (318)
Q Consensus 183 ~~~~~~iIl~a~l~l 197 (318)
.++.+.+|+++.+-.
T Consensus 160 ~l~~~Eii~~I~iP~ 174 (177)
T d1ffvc2 160 LLEENEVMVEIRVPA 174 (177)
T ss_dssp SCCTTCEEEEEEEEC
T ss_pred CCCCCCEEEEEEECC
T ss_conf 469986699998027
No 14
>d1t3qc2 d.145.1.3 (C:1-176) Quinoline 2-oxidoreductase medium subunit QorM {Pseudomonas putida [TaxId: 303]}
Probab=97.77 E-value=7.5e-06 Score=54.36 Aligned_cols=149 Identities=13% Similarity=0.117 Sum_probs=95.8
Q ss_pred EEEECCHHHHHHHHHHHHCCCCEEEECCCCEEEE--EC-CCEECCHHHHCCC-CCCCEEEECCCCCCCCCEEEHHHHHHH
Q ss_conf 9996898999999998562998999847520366--04-8840220221123-443113302665123311221567777
Q gi|254781095|r 42 MFQPQDIHDLKYFLTLLPSDIPITIVGLGSNILV--RD-AGIRGVVLRLSNA-GFSNIEVRNHCEMIVGARCSGKSLANS 117 (318)
Q Consensus 42 ~~~p~s~~el~~~l~~~~~~~p~~iiG~GSNil~--~D-~~~~G~vI~l~~~-~~~~i~~~~~~~i~v~AG~~~~~l~~~ 117 (318)
|+.|+|.+|+.++++..+ ...++++|+.++. .. ...+..+|.+..- .++.++..++ .++.||++.+.++...
T Consensus 8 y~~P~sl~ea~~ll~~~~---~a~~vaGGTdl~~~~~~~~~~p~~lIdl~~i~eL~~i~~~~~-~l~IGa~vt~~~l~~~ 83 (176)
T d1t3qc2 8 YRAPASLQEVIQVLADDP---DARIIAGGQSLLPLLAFRLVYPSCLVDLRNVSELFEISQSAG-ILSVGAMVTHFRNKTD 83 (176)
T ss_dssp EECCSSHHHHHHHHHHCT---TCEEESSCTTHHHHHHTTCCCCSEEEECTTCGGGGCEEEETT-EEEEETTCBHHHHHHC
T ss_pred EECCCCHHHHHHHHHHCC---CCEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCC-CEEECCCHHHHHHHHH
T ss_conf 648899999999997689---987995478346656442038663337555302531660474-1220320036888887
Q ss_pred HH-HHHCCCH----HCCCCHH----HHHHHHHCCCCCCCCCEEEEEE----EEEEEECCCCCEEEECCCCCCCCCCCCCC
Q ss_conf 88-7520120----0038725----6632431157321583134566----64344112321000012334431002322
Q gi|254781095|r 118 AL-RHGIGGF----HFFYGIP----GSIGGAAYMNAGANNCETSQYV----VEVHGIDRKGNQHVIPREQLKYQYRSSEI 184 (318)
Q Consensus 118 ~~-~~gl~Gl----E~l~gIP----GTVGGAi~mNAGayG~ei~d~i----~~V~~~d~~g~~~~l~~~e~~f~YR~S~~ 184 (318)
.. ...+..+ ...++-. |||||.++. +-..+ ++.-.+ ..|++...+| .++++-+|+--+|+.+.+
T Consensus 84 ~~~~~~~p~l~~a~~~ias~qIRn~aTiGGNi~~-a~p~~-D~~~~Llal~A~v~l~~~~g-~R~vpl~df~~g~~~t~l 160 (176)
T d1t3qc2 84 PTVAKCVPILPKVLAHVAHQAVRNRGTLGGSLAH-ADAGA-EMPFLMATLGATMYIASSAG-VRSVSATDFMKGHYFTDL 160 (176)
T ss_dssp HHHHHHCTHHHHHHTTSSCHHHHTTCBHHHHHHH-TCTTC-HHHHHHHHTTCEEEEEETTE-EEEEEHHHHEEETTEESC
T ss_pred HHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEE-CCCCC-HHHHHHHHHHHEEEEECCCC-EEEEEHHHHCCCCCCCCC
T ss_conf 6531015699999972478125878751474100-23010-24689999741278607996-699899995044021057
Q ss_pred CCCCCEEEEECCC
Q ss_conf 4676200100235
Q gi|254781095|r 185 TKDLIITHVVLRG 197 (318)
Q Consensus 185 ~~~~iIl~a~l~l 197 (318)
+++.+|+++.+-.
T Consensus 161 ~~~Eii~~I~iP~ 173 (176)
T d1t3qc2 161 EAGEVLVRVEIPI 173 (176)
T ss_dssp CTTCEEEEEEEEC
T ss_pred CCCCEEEEEEEEC
T ss_conf 9995699999627
No 15
>d1jroa4 d.145.1.3 (A:179-345) Xanthine dehydrogenase chain A, domain 3 {Rhodobacter capsulatus [TaxId: 1061]}
Probab=97.49 E-value=1.9e-05 Score=51.79 Aligned_cols=145 Identities=17% Similarity=0.184 Sum_probs=93.0
Q ss_pred EEECCHHHHHHHHHHHHCCCCEEEECCCCEEEE--ECCC-EECCHHHHCC-CCCCCEEEECCCCCCCCCEEEHHHHHHHH
Q ss_conf 996898999999998562998999847520366--0488-4022022112-34431133026651233112215677778
Q gi|254781095|r 43 FQPQDIHDLKYFLTLLPSDIPITIVGLGSNILV--RDAG-IRGVVLRLSN-AGFSNIEVRNHCEMIVGARCSGKSLANSA 118 (318)
Q Consensus 43 ~~p~s~~el~~~l~~~~~~~p~~iiG~GSNil~--~D~~-~~G~vI~l~~-~~~~~i~~~~~~~i~v~AG~~~~~l~~~~ 118 (318)
+.|+|.+|+.+++...+ ...++++|+.++. .++. ....+|.+.+ ..++.++..++ .+++||++.+.++...+
T Consensus 3 y~P~tl~e~~~l~~~~p---~a~~vaGGTdl~~~~~~~~~~~~~~idl~~i~eL~~i~~~~~-~l~IGA~vt~~~l~~~~ 78 (167)
T d1jroa4 3 FLPETSDALADWYLAHP---EATLIAGGTDVSLWVTKALRDLPEVAFLSHCKDLAQIRETPD-GYGIGAGVTIAALRAFA 78 (167)
T ss_dssp BCCSSHHHHHHHHHHCT---TCEEESSCTTTHHHHHTSCCCCCSEEEGGGCGGGSCEEEETT-EEEEETTCBHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHCC---CCEEEECCCHHHHHHHCCCCCCCCEEEECCCCCCEEEEEECC-CCCCCCCHHHHHHHHHH
T ss_conf 88655999999997789---987997577589886402247874670100144005775034-21246400289998766
Q ss_pred HHHHCCCHH-CC--CCHH-----HHHHHHHCCCCCCCCCEEEEEE----EEEEEECCCCCEEEECCCCCCCCCCCCCCCC
Q ss_conf 875201200-03--8725-----6632431157321583134566----6434411232100001233443100232246
Q gi|254781095|r 119 LRHGIGGFH-FF--YGIP-----GSIGGAAYMNAGANNCETSQYV----VEVHGIDRKGNQHVIPREQLKYQYRSSEITK 186 (318)
Q Consensus 119 ~~~gl~GlE-~l--~gIP-----GTVGGAi~mNAGayG~ei~d~i----~~V~~~d~~g~~~~l~~~e~~f~YR~S~~~~ 186 (318)
.+ -+..|- -+ .+=| |||||.++. +...+. +.-.+ -.|++...+| .++++-+|+--+||.+.++.
T Consensus 79 ~~-~~p~L~~a~~~ia~~qIRn~aTiGGNl~~-a~p~~D-~~~~L~Al~A~v~l~~~~g-~R~vpl~df~~g~~~t~l~~ 154 (167)
T d1jroa4 79 EG-PHPALAGLLRRFASEQVRQVATIGGNIAN-GSPIGD-GPPALIAMGASLTLRRGQE-RRRMPLEDFFLEYRKQDRRP 154 (167)
T ss_dssp TT-TCHHHHHHHHTSSCHHHHTTCBHHHHHHH-CCTTCS-HHHHHHHTTCEEEEEBTTB-CCCCBGGGGEEETTEESCCT
T ss_pred HH-HHHHHHHHHHHHCCHHHHEEEEECCCEEE-CCCCCC-CHHHHHHHHEEEEEECCCC-EEEEEHHHHCCCHHHHCCCC
T ss_conf 63-67999999986348756225575252233-352455-3789998542799971884-08988899567613316898
Q ss_pred CCCEEEEEC
Q ss_conf 762001002
Q gi|254781095|r 187 DLIITHVVL 195 (318)
Q Consensus 187 ~~iIl~a~l 195 (318)
+.+|+++.+
T Consensus 155 ~Eii~~i~i 163 (167)
T d1jroa4 155 GEFVESVTL 163 (167)
T ss_dssp TCEEEEEEE
T ss_pred CCEEEEEEC
T ss_conf 966999982
No 16
>d1w23a_ c.67.1.4 (A:) Phosphoserine aminotransferase, PSAT {Bacillus alcalophilus [TaxId: 1445]}
Probab=66.18 E-value=3 Score=18.94 Aligned_cols=56 Identities=20% Similarity=0.134 Sum_probs=35.0
Q ss_pred CEEEE-EEEECCCCCCCHHHHHHC------CCCCC-CCCCEEECCCCCEEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 70465-889727898510002631------86882-066778715677089968997999999999999999
Q gi|254781095|r 224 EKTGG-STFKNPTGHSAWQLIEKS------GCRGL-EFGGAKISELHCNFMINADNATGYDLEYLGEQVRKK 287 (318)
Q Consensus 224 ~~s~G-SvFkNP~~~~A~~LIe~~------GlKG~-~iG~a~vS~kHanfivN~g~ata~di~~Li~~v~~~ 287 (318)
.+|.+ .+|+-|.+..+..+++.+ +++|+ +.|+.|||--|++ |-+||.+|++.+++=
T Consensus 293 ~rS~~vvsf~i~~~~~~~~~~~~l~~~GI~~~~G~~~~ggiRiS~~~~~--------t~e~V~~Li~~~~~~ 356 (360)
T d1w23a_ 293 SRSLMNVTFNLRNEELNQQFLAKAKEQGFVGLNGHRSVGGCRASIYNAV--------PIDACIALRELMIQF 356 (360)
T ss_dssp GBCSSEEEEECSSHHHHHHHHHHHHHTTEESCBCCTTTCSEEEECCTTS--------CHHHHHHHHHHHHHH
T ss_pred HCCEEEEEEECCCCCCHHHHHHHHHHCCCEEEECCCCCCCEEEEEECCC--------CHHHHHHHHHHHHHH
T ss_conf 1640699998599735999999999789866507776671789950899--------999999999999999
No 17
>d1q7sa_ c.131.1.1 (A:) Bit1 (Cgi-147) {Human (Homo sapiens) [TaxId: 9606]}
Probab=65.70 E-value=3.8 Score=18.32 Aligned_cols=40 Identities=13% Similarity=0.272 Sum_probs=32.5
Q ss_pred CCCCCCCCCCEEEEEEEECCHHHHHHHHHHHH-CCCCEEEE
Q ss_conf 01522576614889999689899999999856-29989998
Q gi|254781095|r 28 KQITWFRTGGNAEVMFQPQDIHDLKYFLTLLP-SDIPITIV 67 (318)
Q Consensus 28 ~~~tt~rvGG~A~~~~~p~s~~el~~~l~~~~-~~~p~~ii 67 (318)
..+.+|.-+|.++......|+++|.++.+.++ .++|..++
T Consensus 41 ~~~~~W~~~g~~KIvl~v~~e~~l~~l~~~a~~~~l~~~~i 81 (117)
T d1q7sa_ 41 EMLKQWEYCGQPKVVVKAPDEETLIALLAHAKMLGLTVSLI 81 (117)
T ss_dssp HHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHCCCCEEEE
T ss_conf 99999998899379996399999999999999879988999
No 18
>d1rlka_ c.131.1.1 (A:) Hypothetical protein TA0108 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}
Probab=61.45 E-value=4.6 Score=17.80 Aligned_cols=50 Identities=12% Similarity=0.154 Sum_probs=36.7
Q ss_pred CCCCCCCCCEEEEEEEECCHHHHHHHHHHHH-CCCCEEEE--------CCCCEEEEECC
Q ss_conf 1522576614889999689899999999856-29989998--------47520366048
Q gi|254781095|r 29 QITWFRTGGNAEVMFQPQDIHDLKYFLTLLP-SDIPITIV--------GLGSNILVRDA 78 (318)
Q Consensus 29 ~~tt~rvGG~A~~~~~p~s~~el~~~l~~~~-~~~p~~ii--------G~GSNil~~D~ 78 (318)
-+..|.-+|.++......|+++|.++.+.++ .++|..++ -.||.+.+.-+
T Consensus 41 ~~~~W~~~g~~KIvl~v~~e~~L~~l~~~a~~~~l~~~~v~DAG~Tei~pgt~Tvlaig 99 (116)
T d1rlka_ 41 VFNEWYDEGQRKIVVKVNDLDEIMEIKRMADSMGIVNEIVQDRGYTQVEPGTITCIGLG 99 (116)
T ss_dssp HHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTCCEEEEECCCSSSSSCCCEEEEEEE
T ss_pred HHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEEEEEC
T ss_conf 99999758962799972999999999999998799889998799761699985899978
No 19
>d3erja1 c.131.1.1 (A:2-117) Hypothetical protein AF2095 {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=43.68 E-value=8.8 Score=16.00 Aligned_cols=40 Identities=10% Similarity=0.101 Sum_probs=31.8
Q ss_pred CCCCCCCCCCEEEEEEEECCHHHHHHHHHHHH-CCCCEEEE
Q ss_conf 01522576614889999689899999999856-29989998
Q gi|254781095|r 28 KQITWFRTGGNAEVMFQPQDIHDLKYFLTLLP-SDIPITIV 67 (318)
Q Consensus 28 ~~~tt~rvGG~A~~~~~p~s~~el~~~l~~~~-~~~p~~ii 67 (318)
..+..|.-+|.++......|+++|.++.+.++ .++|..++
T Consensus 37 ~~~~~W~~~g~~KIvl~v~~e~~L~~l~~~a~~~~l~~~~i 77 (116)
T d3erja1 37 SLRRKWLDEGQKKVVLKVKSLEELLGIKHKAESLGLVTGLV 77 (116)
T ss_dssp HHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHCCCCEEEE
T ss_conf 87899996896179999399999999999999879977999
No 20
>d1bjna_ c.67.1.4 (A:) Phosphoserine aminotransferase, PSAT {Escherichia coli [TaxId: 562]}
Probab=36.62 E-value=11 Score=15.31 Aligned_cols=60 Identities=13% Similarity=0.108 Sum_probs=39.7
Q ss_pred EEEE-EEEECCCCCCCH---HHHHHCCC---CCC-CCCCEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHC
Q ss_conf 0465-889727898510---00263186---882-066778715677089968997999999999999999999847
Q gi|254781095|r 225 KTGG-STFKNPTGHSAW---QLIEKSGC---RGL-EFGGAKISELHCNFMINADNATGYDLEYLGEQVRKKVFNQSG 293 (318)
Q Consensus 225 ~s~G-SvFkNP~~~~A~---~LIe~~Gl---KG~-~iG~a~vS~kHanfivN~g~ata~di~~Li~~v~~~V~~~~g 293 (318)
+|.+ ..|.-|.+..+- .+.++.|. +|+ ++|+.|||--+ .-|-+||.+|++.+|+ ..++||
T Consensus 293 rs~~v~~f~~~~~~~~~~~~~~l~~~Gi~~~~G~~~~g~~Ris~~~--------~~t~edV~~li~~l~e-~~~~~~ 360 (360)
T d1bjna_ 293 RSRMNVPFQLADSALDKLFLEESFAAGLHALKGHRVVGGMRASIYN--------AMPLEGVKALTDFMVE-FERRHG 360 (360)
T ss_dssp BCSSEEEEEESSGGGHHHHHHHHHHTTEECCBCCTTTCSEEEECCT--------TSCHHHHHHHHHHHHH-HHHHHC
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHCCCEEECCCCCCCEEEEEECC--------CCCHHHHHHHHHHHHH-HHHHCC
T ss_conf 4523999875885249999999997898763487756738898348--------8999999999999999-999739
No 21
>d1qz9a_ c.67.1.3 (A:) Kynureninase {Pseudomonas fluorescens [TaxId: 294]}
Probab=35.98 E-value=12 Score=15.24 Aligned_cols=54 Identities=13% Similarity=0.083 Sum_probs=34.5
Q ss_pred EEECCCCCCCHHHHHHCCCCC-CCCCC-EEECCCC-CEEEEECCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 897278985100026318688-20667-7871567-70899689979999999999999999998
Q gi|254781095|r 230 TFKNPTGHSAWQLIEKSGCRG-LEFGG-AKISELH-CNFMINADNATGYDLEYLGEQVRKKVFNQ 291 (318)
Q Consensus 230 vFkNP~~~~A~~LIe~~GlKG-~~iG~-a~vS~kH-anfivN~g~ata~di~~Li~~v~~~V~~~ 291 (318)
.|..|.+....+-+++.|.-+ .|-++ .+||.-| -| |.+||.+|++.+++.+.++
T Consensus 345 sf~~~~~~~v~~~L~~~gi~~~~r~~~~lRiS~~h~yn--------t~~did~~~~~L~~vl~~~ 401 (404)
T d1qz9a_ 345 SFEHPEGYAVIQALIDRGVIGDYREPRIMRFGFTPLYT--------TFTEVWDAVQILGEILDRK 401 (404)
T ss_dssp EEECTTHHHHHHHHHTTTEECEEETTTEEEEECCTTTC--------CHHHHHHHHHHHHHHHHHT
T ss_pred EEECCCHHHHHHHHHHCCCEEEECCCCEEEEECCCCCC--------CHHHHHHHHHHHHHHHHHC
T ss_conf 99169999999999888989862599869997997789--------9999999999999999717
No 22
>d3c5wc1 d.159.1.3 (C:6-293) Protein phosphatase 2A catalytic subunit alpha isoform, PP2A-alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=30.99 E-value=14 Score=14.73 Aligned_cols=45 Identities=18% Similarity=0.127 Sum_probs=26.3
Q ss_pred CCCCCEEEEEEEEC-CHHHHHHHHHHHH--CCCCEEEECCCCEEEEECCCEEC
Q ss_conf 57661488999968-9899999999856--29989998475203660488402
Q gi|254781095|r 33 FRTGGNAEVMFQPQ-DIHDLKYFLTLLP--SDIPITIVGLGSNILVRDAGIRG 82 (318)
Q Consensus 33 ~rvGG~A~~~~~p~-s~~el~~~l~~~~--~~~p~~iiG~GSNil~~D~~~~G 82 (318)
.++-++...+-..+ +.+||..+++... .+.++..+|. .-|.|-.+
T Consensus 41 ~~i~~pv~VvGDlHG~~~DL~~if~~~g~p~~~~ylFLGD-----YVDRG~~s 88 (288)
T d3c5wc1 41 QEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGD-----YVDRGYYS 88 (288)
T ss_dssp EEECSSEEEECBCTTCHHHHHHHHHHHCCTTTSCEEECSC-----CCCSSSSH
T ss_pred EEECCCEEEEEECCCCHHHHHHHHHHCCCCCCCEEEECCC-----CCCCCCCC
T ss_conf 9847996999558799999999998469975451770486-----36778764
No 23
>d2c0ra1 c.67.1.4 (A:2-362) Phosphoserine aminotransferase, PSAT {Bacillus circulans, subsp. alkalophilus [TaxId: 1397]}
Probab=29.86 E-value=15 Score=14.61 Aligned_cols=57 Identities=18% Similarity=0.173 Sum_probs=37.4
Q ss_pred EEEEEEECCCCCCCHHHH---HHCC---CCCCC-CCCEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 465889727898510002---6318---68820-66778715677089968997999999999999999999
Q gi|254781095|r 226 TGGSTFKNPTGHSAWQLI---EKSG---CRGLE-FGGAKISELHCNFMINADNATGYDLEYLGEQVRKKVFN 290 (318)
Q Consensus 226 s~GSvFkNP~~~~A~~LI---e~~G---lKG~~-iG~a~vS~kHanfivN~g~ata~di~~Li~~v~~~V~~ 290 (318)
+...+|..|.+..+..+. ++.| .+|++ .|+.|||--++ -|-.||..|++.+++-.++
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~L~~~GI~~~~G~~~~g~~RIs~~~~--------~~~edv~~Lv~~l~~~~~~ 359 (361)
T d2c0ra1 296 DMNITFRLASEELEKEFVKASEQEGFVGLKGHRSVGGLRASIYNA--------VPYESCEALVQFMEHFKRS 359 (361)
T ss_dssp SSEEEEECSCHHHHHHHHHHHHHTTEESCBCCTTTCSEEEECCTT--------SCHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEECCCCCCHHHHHHHHHHCCCEEECCCCCCCEEEEEECCC--------CCHHHHHHHHHHHHHHHHH
T ss_conf 439999789854699999999978888736988678698870688--------9999999999999999996
No 24
>d1hkva1 b.49.2.3 (A:2-45,A:311-447) Diaminopimelate decarboxylase LysA {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=23.87 E-value=15 Score=14.50 Aligned_cols=13 Identities=23% Similarity=0.133 Sum_probs=8.5
Q ss_pred CCCCCCCCCEEEE
Q ss_conf 1573215831345
Q gi|254781095|r 141 YMNAGANNCETSQ 153 (318)
Q Consensus 141 ~mNAGayG~ei~d 153 (318)
.+|+||||..++.
T Consensus 133 i~~~GAYg~sMsS 145 (181)
T d1hkva1 133 VAATGAYCYSLSS 145 (181)
T ss_dssp ESCCSSSTGGGCB
T ss_pred EECCCCCHHHHCC
T ss_conf 8434111245353
No 25
>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}
Probab=23.63 E-value=13 Score=15.03 Aligned_cols=32 Identities=19% Similarity=0.238 Sum_probs=22.9
Q ss_pred EEEEEEECCHHHHHHHHHHHHCCCCEEEECCC
Q ss_conf 88999968989999999985629989998475
Q gi|254781095|r 39 AEVMFQPQDIHDLKYFLTLLPSDIPITIVGLG 70 (318)
Q Consensus 39 A~~~~~p~s~~el~~~l~~~~~~~p~~iiG~G 70 (318)
++.+...++.+|..++.+..+....+.|+|+|
T Consensus 13 ~~~v~~lr~~~d~~~l~~~~~~~k~v~VIGgG 44 (133)
T d1q1ra2 13 ANNFRYLRTLEDAECIRRQLIADNRLVVIGGG 44 (133)
T ss_dssp STTEEESSSHHHHHHHHHTCCTTCEEEEECCS
T ss_pred CCCEEEECCHHHHHHHHHHHCCCCEEEEECCC
T ss_conf 58864868899999999863218889999983
No 26
>d1rl2a1 b.34.5.3 (A:126-195) C-terminal domain of ribosomal protein L2 {Bacillus stearothermophilus [TaxId: 1422]}
Probab=22.72 E-value=18 Score=14.02 Aligned_cols=38 Identities=18% Similarity=0.033 Sum_probs=26.5
Q ss_pred HHHHHCCCCCCCCCEEEEEEEEEEEECCCCCEEEECCC
Q ss_conf 32431157321583134566643441123210000123
Q gi|254781095|r 136 IGGAAYMNAGANNCETSQYVVEVHGIDRKGNQHVIPRE 173 (318)
Q Consensus 136 VGGAi~mNAGayG~ei~d~i~~V~~~d~~g~~~~l~~~ 173 (318)
=||-++..||+|..=++..=..+.+-.+.|+++.++.+
T Consensus 24 ~ggk~~RsAGt~a~ii~k~~~~~~vkLpSge~r~i~~~ 61 (70)
T d1rl2a1 24 RGGQLVRAAGTSAQVLGKEGKYVIVRLASGEVRMILGK 61 (70)
T ss_dssp SCEEESSSSSCCEEEEEEETTEEEEECTTSCEEEEETT
T ss_pred CCCEEEECCCCEEEEEEEECCEEEEEECCCCEEEECCC
T ss_conf 77499983676078999807836999079888989986
No 27
>d1usha2 d.159.1.2 (A:26-362) 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=20.03 E-value=22 Score=13.44 Aligned_cols=55 Identities=15% Similarity=0.015 Sum_probs=32.9
Q ss_pred HHHHHHCCCCCCCCCCEEECCCCCEE--------EE------------------ECCCCCHHHHHHHHHHHHHHHHHHHC
Q ss_conf 00026318688206677871567708--------99------------------68997999999999999999999847
Q gi|254781095|r 240 WQLIEKSGCRGLEFGGAKISELHCNF--------MI------------------NADNATGYDLEYLGEQVRKKVFNQSG 293 (318)
Q Consensus 240 ~~LIe~~GlKG~~iG~a~vS~kHanf--------iv------------------N~g~ata~di~~Li~~v~~~V~~~~g 293 (318)
+-+|=++|..|..+|...+.=+.... -| ...-+.-.++.++++..++++.++.+
T Consensus 257 ~~~vvqag~~g~~lG~i~l~~~~~~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~~~~~~~d~~v~~~v~~~~~~~~~~l~ 336 (337)
T d1usha2 257 GIWIVQAHEWGKYVGRADFEFRNGEMKMVNYQLIPVNLKKKVTWEDGKSERVLYTPEIAENQQMISLLSPFQNKGKAQLE 336 (337)
T ss_dssp TEEEECBCSTTSEEEEEEEEEETTEEEEEEEEEEESSCBC----------CCBSSCCCCCCHHHHHHHHHHHHHHHHHTT
T ss_pred CEEEEECCHHHCEEEEEEEEEECCEEEEEEEEEEEEECCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHC
T ss_conf 88999678587688899999989908898767777505664452321011101354568798999999999999776328
Q ss_pred C
Q ss_conf 5
Q gi|254781095|r 294 I 294 (318)
Q Consensus 294 i 294 (318)
|
T Consensus 337 v 337 (337)
T d1usha2 337 V 337 (337)
T ss_dssp S
T ss_pred C
T ss_conf 7
Done!