HHsearch alignment for GI: 254781096 and conserved domain: CHL00194

>CHL00194 ycf39 Ycf39; Provisional.
Probab=95.54  E-value=0.2  Score=28.75  Aligned_cols=119  Identities=17%  Similarity=0.167  Sum_probs=65.6

Q ss_pred             EEEEEEECHHHHHH--HHHHHHHCCCEEEEEECCCCHHHHHHHHCCCEEEEC--CCHHH----CCCCCEEEECCCCCCCC
Q ss_conf             07999461460878--999999879869996078998899999889889967--99788----68898999888989999
Q gi|254781096|r    9 PIHFVGIGGIGMSG--IAEVLHNTGHQVQGSDVILGPNVQRLHKQGIKVSIG--HKVEN----IDNAEILVLSTAIDKDN   80 (474)
Q Consensus         9 ~i~~iGigG~G~s~--lA~~l~~~G~~V~g~D~~~~~~~~~L~~~gi~i~~g--~~~~~----i~~~d~vV~spgi~~~~   80 (474)
T Consensus         2 ~ILV~--GATG~lGr~vVr~Ll~~G~~Vr~lvRnp-~ka~~l~~~Gve~v~gDl~dpesl~~Al~GvdaVi~~~~~~~~~   78 (319)
T CHL00194          2 SLLVI--GATGTLGRQIVRRALDEGYQVKCLVRNL-RKAAFLKEWGAELVYGDLSLPETIPPALEGITAIIDASTSRPSD   78 (319)
T ss_pred             EEEEE--CCCCHHHHHHHHHHHHCCCCEEEEECCH-HHHHHHHHCCCEEEEECCCCHHHHHHHHCCCCEEEEECCCCCCC
T ss_conf             79998--9985899999999996889089995786-76323421596799942788778999965996799945667788


Q ss_pred             -------------HHHHHHHHCCCCEEEHHHHHHHHHCC-CCCEEEECCCCCCHHHHHHHHHHCCCCCCEEEE
Q ss_conf             -------------88999997799499538998864116-851587045784047788886403444430575
Q gi|254781096|r   81 -------------VECIAARERNIPIIFRSEMLAGLMRC-RKSISVSGTHGKTTTTSLIAALLEQGKFDPTVI  139 (474)
Q Consensus        81 -------------~~l~~a~~~gi~i~~~~e~l~~~~~~-~~~IaVTGTnGKTTTt~ml~~il~~~g~~~~~~  139 (474)
T Consensus        79 ~~~~~~vd~~g~~~li~AAk~aGVkr~V~---lS~lga~~~~~~p------~~~~K~~~E~~L~~Sgl~~TIl  142 (319)
T CHL00194         79 LNNAYQIDLEGKLALIEAAKAAKVKRFIF---FSILNAEQYPQVP------LMKIKSDIEEKLKQSGINYTIF  142 (319)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHCCCCEEEE---ECCCCCCCCCCCH------HHHHHHHHHHHHHHCCCCEEEE
T ss_conf             62088988988999999999849988999---6135666688756------7787999999998679985998