HHsearch alignment for GI: 254781096 and conserved domain: COG1440

>COG1440 CelA Phosphotransferase system cellobiose-specific component IIB [Carbohydrate transport and metabolism].

Probab=92.13  E-value=0.28  Score=27.82  Aligned_cols=70  Identities=26%  Similarity=0.311  Sum_probs=44.2

Q ss_pred             CCEEEEEEECHHHHHH--HH----HHHHHCCCEEEEEECCCCHHHHHHHHCCCEEEECCCHHHCCCCCEEEECCCCCCCC
Q ss_conf             7607999461460878--99----99998798699960789988999998898899679978868898999888989999
Q gi|254781096|r    7 MGPIHFVGIGGIGMSG--IA----EVLHNTGHQVQGSDVILGPNVQRLHKQGIKVSIGHKVENIDNAEILVLSTAIDKDN   80 (474)
Q Consensus         7 ~~~i~~iGigG~G~s~--lA----~~l~~~G~~V~g~D~~~~~~~~~L~~~gi~i~~g~~~~~i~~~d~vV~spgi~~~~   80 (474)
T Consensus         1 Mk~IlLv--C~aGmSTSlLV~Km~~aA~~kg~~~~I~A~s~~----------------e~~~~~~~~DvvLlGPQv~y~~   62 (102)
T COG1440           1 MKKILLV--CAAGMSTSLLVTKMKKAAESKGKDVTIEAYSET----------------ELSEYIDNADVVLLGPQVRYML   62 (102)
T ss_pred             CCEEEEE--ECCCCCHHHHHHHHHHHHHHCCCCEEEEEECHH----------------HHHHHHHCCCEEEECHHHHHHH
T ss_conf             9449998--458874889999999999957996599981065----------------7887663089899872899889


Q ss_pred             HHHHH-HHHCCCCEE
Q ss_conf             88999-997799499
Q gi|254781096|r   81 VECIA-ARERNIPII   94 (474)
Q Consensus        81 ~~l~~-a~~~gi~i~   94 (474)
T Consensus        63 ~~~~~~~~~~giPV~   77 (102)
T COG1440          63 KQLKEAAEEKGIPVE   77 (102)
T ss_pred             HHHHHHHCCCCCCEE
T ss_conf             999998431599767