HHsearch alignment for GI: 254781096 and conserved domain: PRK00421
>PRK00421 murC UDP-N-acetylmuramate--L-alanine ligase; Provisional.
Probab=100.00 E-value=0 Score=883.14 Aligned_cols=455 Identities=51% Similarity=0.836 Sum_probs=434.3
Q ss_pred CCHHHCCEEEEEEECHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHCCCEEEECCCHHHCCCCCEEEECCCCCCCCH
Q ss_conf 85312760799946146087899999987986999607899889999988988996799788688989998889899998
Q gi|254781096|r 2 LNPQGMGPIHFVGIGGIGMSGIAEVLHNTGHQVQGSDVILGPNVQRLHKQGIKVSIGHKVENIDNAEILVLSTAIDKDNV 81 (474)
Q Consensus 2 ~~~~~~~~i~~iGigG~G~s~lA~~l~~~G~~V~g~D~~~~~~~~~L~~~gi~i~~g~~~~~i~~~d~vV~spgi~~~~~ 81 (474)
T Consensus 3 ~~~~~~k~ih~iGigG~GmsalA~~l~~~G~~V~gsD~~~~~~~~~L~~~Gi~v~~g~~~~~l~~~d~vV~Sp~I~~~~p 82 (459)
T PRK00421 3 PLPRRIKRIHFVGIGGIGMSGLAEVLLNLGYKVSGSDLKESAVTQRLLELGAIIFIGHDAENIKGADVVVVSSAIKPDNP 82 (459)
T ss_pred CCCCCCCEEEEEEECHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHCCCEEECCCCHHHCCCCCEEEECCCCCCCCH
T ss_conf 87656788999986688899999999968993999889899789999978799977989798799999998998599899
Q ss_pred HHHHHHHCCCCEEEHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHH
Q ss_conf 89999977994995389988641168515870457840477888864034444305753573333310014685420011
Q gi|254781096|r 82 ECIAARERNIPIIFRSEMLAGLMRCRKSISVSGTHGKTTTTSLIAALLEQGKFDPTVINGGIINSYGTNARIGTSEWIVV 161 (474)
Q Consensus 82 ~l~~a~~~gi~i~~~~e~l~~~~~~~~~IaVTGTnGKTTTt~ml~~il~~~g~~~~~~~G~~~~~~~~~~~~~~~~~~V~ 161 (474)
T Consensus 83 ~~~~a~~~gi~v~~~~e~l~~~~~~~~~IaVtGTnGKTTtT~ll~~il~~~g~~~~~~iGg~~~~~~~~~~~~~~~~~V~ 162 (459)
T PRK00421 83 ELVAARELGIPVVRRAEMLAELMRLRTSIAVAGTHGKTTTTSLLAHVLAEAGLDPTFIIGGILNAAGTNARLGSSDYFVA 162 (459)
T ss_pred HHHHHHHCCCCEEEHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCEEEE
T ss_conf 99999987997988999999998259649997788861189999999997699874885753355665452588988999
Q ss_pred HCCCCCCHHHHCCCCCEEEEEEECCCHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCC
Q ss_conf 02322101221185530342220220110002556666430133333322222223465013454320011123333333
Q gi|254781096|r 162 EADESDGTFIRLPSDIVVVTNIDPEHLDYYGDFNAIRAAFYKFIDNIPFYGFAVVCMDHPEVRSLIARIQNRKIITYGRH 241 (474)
Q Consensus 162 E~~e~~~s~~~~~P~iaVitNI~~DHld~~~s~e~y~~aK~~i~~~~~~~g~~vin~Dd~~~~~~~~~~~~~~v~~fg~~ 241 (474)
T Consensus 163 E~dE~d~sf~~~~P~iavitNI~~DHLD~h~s~e~Y~~ak~~~~~~~~~~g~~ViN~DD~~~~~l~~~~-~~~vitfg~~ 241 (459)
T PRK00421 163 EADESDRSFLKLHPDIAVVTNIDADHLDYYGDFEDLKDAFQEFAHNLPFYGALVACGDDPELRELLPRV-DRPVITYGFS 241 (459)
T ss_pred EECCCCCCHHHCCCCEEEEECCCHHHHHHCCCHHHHHHHHHHHHHCCCCCCCEECCCCCHHHHHHHHHC-CCCCEEECCC
T ss_conf 953541436445898999917987786560189999999999997199547211468798999987743-8860023568
Q ss_pred CCCCEEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCHHHHHHHHHHCCCCCCCC
Q ss_conf 22220221021125842013555113444442000023567654333221121001232100000013343100001582
Q gi|254781096|r 242 PQADIRYSNIRKYSGRSIFDVSVQGNVTKDLTVIKDLSLPLIGEHNISNACASIAVAYKLGLSSEDVKKGLASFSGIKRR 321 (474)
Q Consensus 242 ~~~d~~~~~i~~~~~~~~f~~~~~~~~~~~~~~~~~~~l~l~G~Hn~~NalaAia~a~~lgi~~e~i~~~L~~f~g~~~R 321 (474)
T Consensus 242 ~~~d~~~~~i~~~~~~~~f~~~~~~~~------~~~~~l~l~G~HNv~NalAAia~a~~lGi~~e~i~~aL~~F~Gv~~R 315 (459)
T PRK00421 242 EDADFRAENIRQDGGGSHFDVLREGED------LGDFTLPLPGRHNVLNALAAIAVALELGIDDEAIRKALATFKGVKRR 315 (459)
T ss_pred CCCCEEEEEEEEECCCEEEEEEECCCE------EEEEEECCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEE
T ss_conf 766667888999489238999838937------88999568638899999999999998499999999999753574502
Q ss_pred EEEECCCCCEEEEEECCCCCCCCHHHHHHHHCCCC-CCCEEEEECCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCC
Q ss_conf 21101478604763024455430222333101344-32103330366314788899999998618999990866677643
Q gi|254781096|r 322 FTLVGVWNDVHVFDDYGHHPIEISSVLAAVRQICP-RKIIAIHQPHRYSRLSTLFDQFSSCFGDADIVLISPVYSAGEKE 400 (474)
Q Consensus 322 ~e~v~~~~gv~~idDyahnP~~i~atl~al~~~~~-~rii~i~~p~~~sr~~~~~~e~~~~l~~ad~vil~~i~~~~e~~ 400 (474)
T Consensus 316 ~E~v~~~~gv~~idDYAH~P~~i~a~l~alr~~~~~~rii~vfqPh~~sR~~~~~~e~a~~l~~aD~vil~~iy~a~E~~ 395 (459)
T PRK00421 316 FEEKGEVNGVVLIDDYAHHPTEIKATLKAARQKYPDKRIVAVFQPHRYSRTRDLFDEFAEVLSDADEVILLDIYAAGEAP 395 (459)
T ss_pred EEEEEECCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCC
T ss_conf 79987228847997356893899999999998768996699986742054899999999998719999988875888876
Q ss_pred CCCCCHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHH
Q ss_conf 238999999999996389989998898999999998558987999944899889999999998
Q gi|254781096|r 401 IPGFSSPELVKNIKLQGHPQAYYMDSFDHLVSKILAIAEPGDFIIFFGAGNITQWAASLIGEL 463 (474)
Q Consensus 401 ~~g~~~~~l~~~i~~~~~~~~~~~~~~~eav~~~~~~~~~gDvVL~~GaG~~~~~~~~~~~~l 463 (474)
T Consensus 396 ~~g~~~~~i~~~i~~~~~~~~~~~~~~~~ai~~~~~~a~~gDvVL~~GaGd~~~~~~~l~~~l 458 (459)
T PRK00421 396 IPGVDSEDLARAIRKRGHVDVIFVPDVDDLAELLADVLQPGDLVLTMGAGDITKLARALLELL 458 (459)
T ss_pred CCCCCHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHH
T ss_conf 578899999999986089887996999999999998589989999979999899999999965