HHsearch alignment for GI: 254781096 and conserved domain: PRK00421

>PRK00421 murC UDP-N-acetylmuramate--L-alanine ligase; Provisional.
Probab=100.00  E-value=0  Score=883.14  Aligned_cols=455  Identities=51%  Similarity=0.836  Sum_probs=434.3

Q ss_pred             CCHHHCCEEEEEEECHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHCCCEEEECCCHHHCCCCCEEEECCCCCCCCH
Q ss_conf             85312760799946146087899999987986999607899889999988988996799788688989998889899998
Q gi|254781096|r    2 LNPQGMGPIHFVGIGGIGMSGIAEVLHNTGHQVQGSDVILGPNVQRLHKQGIKVSIGHKVENIDNAEILVLSTAIDKDNV   81 (474)
Q Consensus         2 ~~~~~~~~i~~iGigG~G~s~lA~~l~~~G~~V~g~D~~~~~~~~~L~~~gi~i~~g~~~~~i~~~d~vV~spgi~~~~~   81 (474)
T Consensus         3 ~~~~~~k~ih~iGigG~GmsalA~~l~~~G~~V~gsD~~~~~~~~~L~~~Gi~v~~g~~~~~l~~~d~vV~Sp~I~~~~p   82 (459)
T PRK00421          3 PLPRRIKRIHFVGIGGIGMSGLAEVLLNLGYKVSGSDLKESAVTQRLLELGAIIFIGHDAENIKGADVVVVSSAIKPDNP   82 (459)
T ss_pred             CCCCCCCEEEEEEECHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHCCCEEECCCCHHHCCCCCEEEECCCCCCCCH
T ss_conf             87656788999986688899999999968993999889899789999978799977989798799999998998599899


Q ss_pred             HHHHHHHCCCCEEEHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHH
Q ss_conf             89999977994995389988641168515870457840477888864034444305753573333310014685420011
Q gi|254781096|r   82 ECIAARERNIPIIFRSEMLAGLMRCRKSISVSGTHGKTTTTSLIAALLEQGKFDPTVINGGIINSYGTNARIGTSEWIVV  161 (474)
Q Consensus        82 ~l~~a~~~gi~i~~~~e~l~~~~~~~~~IaVTGTnGKTTTt~ml~~il~~~g~~~~~~~G~~~~~~~~~~~~~~~~~~V~  161 (474)
T Consensus        83 ~~~~a~~~gi~v~~~~e~l~~~~~~~~~IaVtGTnGKTTtT~ll~~il~~~g~~~~~~iGg~~~~~~~~~~~~~~~~~V~  162 (459)
T PRK00421         83 ELVAARELGIPVVRRAEMLAELMRLRTSIAVAGTHGKTTTTSLLAHVLAEAGLDPTFIIGGILNAAGTNARLGSSDYFVA  162 (459)
T ss_pred             HHHHHHHCCCCEEEHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCEEEE
T ss_conf             99999987997988999999998259649997788861189999999997699874885753355665452588988999


Q ss_pred             HCCCCCCHHHHCCCCCEEEEEEECCCHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCC
Q ss_conf             02322101221185530342220220110002556666430133333322222223465013454320011123333333
Q gi|254781096|r  162 EADESDGTFIRLPSDIVVVTNIDPEHLDYYGDFNAIRAAFYKFIDNIPFYGFAVVCMDHPEVRSLIARIQNRKIITYGRH  241 (474)
Q Consensus       162 E~~e~~~s~~~~~P~iaVitNI~~DHld~~~s~e~y~~aK~~i~~~~~~~g~~vin~Dd~~~~~~~~~~~~~~v~~fg~~  241 (474)
T Consensus       163 E~dE~d~sf~~~~P~iavitNI~~DHLD~h~s~e~Y~~ak~~~~~~~~~~g~~ViN~DD~~~~~l~~~~-~~~vitfg~~  241 (459)
T PRK00421        163 EADESDRSFLKLHPDIAVVTNIDADHLDYYGDFEDLKDAFQEFAHNLPFYGALVACGDDPELRELLPRV-DRPVITYGFS  241 (459)
T ss_pred             EECCCCCCHHHCCCCEEEEECCCHHHHHHCCCHHHHHHHHHHHHHCCCCCCCEECCCCCHHHHHHHHHC-CCCCEEECCC
T ss_conf             953541436445898999917987786560189999999999997199547211468798999987743-8860023568


Q ss_pred             CCCCEEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCHHHHHHHHHHCCCCCCCC
Q ss_conf             22220221021125842013555113444442000023567654333221121001232100000013343100001582
Q gi|254781096|r  242 PQADIRYSNIRKYSGRSIFDVSVQGNVTKDLTVIKDLSLPLIGEHNISNACASIAVAYKLGLSSEDVKKGLASFSGIKRR  321 (474)
Q Consensus       242 ~~~d~~~~~i~~~~~~~~f~~~~~~~~~~~~~~~~~~~l~l~G~Hn~~NalaAia~a~~lgi~~e~i~~~L~~f~g~~~R  321 (474)
T Consensus       242 ~~~d~~~~~i~~~~~~~~f~~~~~~~~------~~~~~l~l~G~HNv~NalAAia~a~~lGi~~e~i~~aL~~F~Gv~~R  315 (459)
T PRK00421        242 EDADFRAENIRQDGGGSHFDVLREGED------LGDFTLPLPGRHNVLNALAAIAVALELGIDDEAIRKALATFKGVKRR  315 (459)
T ss_pred             CCCCEEEEEEEEECCCEEEEEEECCCE------EEEEEECCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEE
T ss_conf             766667888999489238999838937------88999568638899999999999998499999999999753574502


Q ss_pred             EEEECCCCCEEEEEECCCCCCCCHHHHHHHHCCCC-CCCEEEEECCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCC
Q ss_conf             21101478604763024455430222333101344-32103330366314788899999998618999990866677643
Q gi|254781096|r  322 FTLVGVWNDVHVFDDYGHHPIEISSVLAAVRQICP-RKIIAIHQPHRYSRLSTLFDQFSSCFGDADIVLISPVYSAGEKE  400 (474)
Q Consensus       322 ~e~v~~~~gv~~idDyahnP~~i~atl~al~~~~~-~rii~i~~p~~~sr~~~~~~e~~~~l~~ad~vil~~i~~~~e~~  400 (474)
T Consensus       316 ~E~v~~~~gv~~idDYAH~P~~i~a~l~alr~~~~~~rii~vfqPh~~sR~~~~~~e~a~~l~~aD~vil~~iy~a~E~~  395 (459)
T PRK00421        316 FEEKGEVNGVVLIDDYAHHPTEIKATLKAARQKYPDKRIVAVFQPHRYSRTRDLFDEFAEVLSDADEVILLDIYAAGEAP  395 (459)
T ss_pred             EEEEEECCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCC
T ss_conf             79987228847997356893899999999998768996699986742054899999999998719999988875888876


Q ss_pred             CCCCCHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHH
Q ss_conf             238999999999996389989998898999999998558987999944899889999999998
Q gi|254781096|r  401 IPGFSSPELVKNIKLQGHPQAYYMDSFDHLVSKILAIAEPGDFIIFFGAGNITQWAASLIGEL  463 (474)
Q Consensus       401 ~~g~~~~~l~~~i~~~~~~~~~~~~~~~eav~~~~~~~~~gDvVL~~GaG~~~~~~~~~~~~l  463 (474)
T Consensus       396 ~~g~~~~~i~~~i~~~~~~~~~~~~~~~~ai~~~~~~a~~gDvVL~~GaGd~~~~~~~l~~~l  458 (459)
T PRK00421        396 IPGVDSEDLARAIRKRGHVDVIFVPDVDDLAELLADVLQPGDLVLTMGAGDITKLARALLELL  458 (459)
T ss_pred             CCCCCHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHH
T ss_conf             578899999999986089887996999999999998589989999979999899999999965