HHsearch alignment for GI: 254781096 and conserved domain: PRK00771
>PRK00771 signal recognition particle protein Srp54; Provisional.
Probab=91.91 E-value=0.48 Score=26.21 Aligned_cols=32 Identities=31% Similarity=0.456 Sum_probs=25.2
Q ss_pred CCEEEECCC--CCCHHHHHHHHHHCCCCCCEEEE
Q ss_conf 515870457--84047788886403444430575
Q gi|254781096|r 108 KSISVSGTH--GKTTTTSLIAALLEQGKFDPTVI 139 (474)
Q Consensus 108 ~~IaVTGTn--GKTTTt~ml~~il~~~g~~~~~~ 139 (474)
T Consensus 98 ~Vim~vGlqGsGKTTT~aKLA~~~kk~g~kv~lv 131 (433)
T PRK00771 98 QTILLVGLQGSGKTTTAAKLARYFQKKGLKVGVI 131 (433)
T ss_pred EEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEE
T ss_conf 5899973788978999999999999779946785