HHsearch alignment for GI: 254781096 and conserved domain: PRK01710

>PRK01710 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional.
Probab=100.00  E-value=0  Score=582.76  Aligned_cols=408  Identities=21%  Similarity=0.308  Sum_probs=322.6

Q ss_pred             CCEEEEEEECHHHHHHHHHHHHHCCCEEEEEECCCCH----HHHHHHHCCCEEEECCC-HHHCCCCCEEEECCCCCCCCH
Q ss_conf             7607999461460878999999879869996078998----89999988988996799-788688989998889899998
Q gi|254781096|r    7 MGPIHFVGIGGIGMSGIAEVLHNTGHQVQGSDVILGP----NVQRLHKQGIKVSIGHK-VENIDNAEILVLSTAIDKDNV   81 (474)
Q Consensus         7 ~~~i~~iGigG~G~s~lA~~l~~~G~~V~g~D~~~~~----~~~~L~~~gi~i~~g~~-~~~i~~~d~vV~spgi~~~~~   81 (474)
T Consensus        14 ~kkv~i~GlG~sG~a-~a~~L~~~g~~v~~~D~~~~~~~~~~~~~l~~~gi~~~~g~~~~~~~~~~d~vv~SPgI~~~~p   92 (458)
T PRK01710         14 NKKVAVVGIGVSNIP-LIKFLVKLGAKVTAFDKKSEEELGEISLELKEKGVNLELGENYLDKLTGFDVIFKTPSMRIDSP   92 (458)
T ss_pred             CCEEEEEEECHHHHH-HHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHCCCEEEECCCHHHHCCCCCEEEECCCCCCCCH
T ss_conf             996999978788999-9999997889799998988431489999998579989957840542378888998998799899


Q ss_pred             HHHHHHHCCCCEEEHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCCC-CCCCCCCCCH
Q ss_conf             899999779949953899886411685158704578404778888640344443057535733333100-1468542001
Q gi|254781096|r   82 ECIAARERNIPIIFRSEMLAGLMRCRKSISVSGTHGKTTTTSLIAALLEQGKFDPTVINGGIINSYGTN-ARIGTSEWIV  160 (474)
Q Consensus        82 ~l~~a~~~gi~i~~~~e~l~~~~~~~~~IaVTGTnGKTTTt~ml~~il~~~g~~~~~~~G~~~~~~~~~-~~~~~~~~~V  160 (474)
T Consensus        93 ~~~~a~~~gi~v~~e~el~~~~~~~-~~IaVTGTnGKTTTtsmi~~iL~~~g~~~-~~gGNiG~p~~~~~~~~~~~d~~V  170 (458)
T PRK01710         93 ELVKAKEEGAYITSEMEEFIKYCPA-KVFGITGSDGKTTTTTLIYEMLKEEGYKT-WVGGNIGTPLFSNIEEIKEEDKVV  170 (458)
T ss_pred             HHHHHHHCCCCEECHHHHHHHHCCC-CEEEEECCCCCHHHHHHHHHHHHHCCCCE-EEECCCCCHHHHHHHHCCCCCEEE
T ss_conf             9999998799374099999863758-77999368984789999999999849975-851662644688885057886699


Q ss_pred             HHCCCCCCHHHHCCCCCEEEEEEECCCHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCC
Q ss_conf             10232210122118553034222022011000255666643013333332222222346501345432001112333333
Q gi|254781096|r  161 VEADESDGTFIRLPSDIVVVTNIDPEHLDYYGDFNAIRAAFYKFIDNIPFYGFAVVCMDHPEVRSLIARIQNRKIITYGR  240 (474)
Q Consensus       161 ~E~~e~~~s~~~~~P~iaVitNI~~DHld~~~s~e~y~~aK~~i~~~~~~~g~~vin~Dd~~~~~~~~~~~~~~v~~fg~  240 (474)
T Consensus       171 ~E~SS~ql~~~~~~P~iaVitNi~~DHLD~h~s~e~Y~~aK~~i~~~~~~~~~~i~n~Dd~~~~~~~~~~~~-~~~~f~~  249 (458)
T PRK01710        171 LELSSFQLMTMDVSPEVAVVTNLSPNHLDVHKDMEEYVDAKKNIFKYQSSNDLLVLNKDNEITNGMEKEAKG-DVVKFSR  249 (458)
T ss_pred             EEECHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHCCC-CEEEECC
T ss_conf             993215553054688789983588536506541999999999999638877379993786999998776368-7899536


Q ss_pred             CCCCCEEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCHHHHHHHHHHCCCCCCC
Q ss_conf             32222022102112584201355511344444200002356765433322112100123210000001334310000158
Q gi|254781096|r  241 HPQADIRYSNIRKYSGRSIFDVSVQGNVTKDLTVIKDLSLPLIGEHNISNACASIAVAYKLGLSSEDVKKGLASFSGIKR  320 (474)
Q Consensus       241 ~~~~d~~~~~i~~~~~~~~f~~~~~~~~~~~~~~~~~~~l~l~G~Hn~~NalaAia~a~~lgi~~e~i~~~L~~f~g~~~  320 (474)
T Consensus       250 ~~~~~~--~~~-~~~~~~----~~~~~~-----~~~~~~l~l~G~HN~~N~lAA~aa~~-~gi~~e~i~~aL~~F~Gl~h  316 (458)
T PRK01710        250 KEKLKE--GAY-YKDGKL----YIRGKE-----VCKKDDIKLKGMHNVENLLAAFCAVN-DDVSIESMKKVATTFTGVEH  316 (458)
T ss_pred             CCCCCC--CCE-EECCEE----EECCCE-----ECCHHHCCCCCHHHHHHHHHHHHHHH-CCCCHHHHHHHHHHCCCHHH
T ss_conf             654566--736-766889----987840-----11324216776544999999999998-19999999999875435342


Q ss_pred             CEEEECCCCCEEEEEE-CCCCCCCCHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHH-HCCEEEEECCCCCCC
Q ss_conf             2211014786047630-24455430222333101344321033303663147888999999986-189999908666776
Q gi|254781096|r  321 RFTLVGVWNDVHVFDD-YGHHPIEISSVLAAVRQICPRKIIAIHQPHRYSRLSTLFDQFSSCFG-DADIVLISPVYSAGE  398 (474)
Q Consensus       321 R~e~v~~~~gv~~idD-yahnP~~i~atl~al~~~~~~rii~i~~p~~~sr~~~~~~e~~~~l~-~ad~vil~~i~~~~e  398 (474)
T Consensus       317 R~E~v~~~~gv~~iNDSkaTn~~s~~---~AL~~~-~~~iilI~GG--~~K~~d~-~~l~~~~~~~~k~vi~--------  381 (458)
T PRK01710        317 RCEFVREINGVKYYNDSIASSPTRTL---AGLNAF-EKPVILIAGG--YDKKIPF-EPLAEEGYEKIKILIL--------  381 (458)
T ss_pred             HHEEEEEECCEEEEECCCCCCHHHHH---HHHHCC-CCCEEEEECC--CCCCCCH-HHHHHHHHHHCCEEEE--------
T ss_conf             31465787476798157668989999---999716-7772999646--5667886-9999987630529999--------


Q ss_pred             CCCCCCCHHHHHHHHHHC-----CCCCEEEECCHHHHHHHHHHHCCCCCEEEEECCC
Q ss_conf             432389999999999963-----8998999889899999999855898799994489
Q gi|254781096|r  399 KEIPGFSSPELVKNIKLQ-----GHPQAYYMDSFDHLVSKILAIAEPGDFIIFFGAG  450 (474)
Q Consensus       399 ~~~~g~~~~~l~~~i~~~-----~~~~~~~~~~~~eav~~~~~~~~~gDvVL~~GaG  450 (474)
T Consensus       382 ---~G~~~~~i~~~l~~~~~~~~~~~~~~~~~~l~~Av~~a~~~a~~gd~VLl-SPa  434 (458)
T PRK01710        382 ---MGDTKNKIKEAFKKVEEEKGIKIPIVIVNSLEEAVKVAKNIAEKGDIITL-SPA  434 (458)
T ss_pred             ---ECCCHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHCCCCCEEEE-CCC
T ss_conf             ---78877999999987666316886523373599999999975889798998-973