HHsearch alignment for GI: 254781096 and conserved domain: PRK05134

>PRK05134 3-demethylubiquinone-9 3-methyltransferase; Provisional.
Probab=93.05  E-value=0.29  Score=27.71  Aligned_cols=111  Identities=16%  Similarity=0.148  Sum_probs=58.8

Q ss_pred             CHHHCCEEEEEEECHHHHHHHHHHHHHCCCEEEEEECCCCHHH-HH--HHHCC--CEEEECCCHHHC-----CCCCEEEE
Q ss_conf             5312760799946146087899999987986999607899889-99--99889--889967997886-----88989998
Q gi|254781096|r    3 NPQGMGPIHFVGIGGIGMSGIAEVLHNTGHQVQGSDVILGPNV-QR--LHKQG--IKVSIGHKVENI-----DNAEILVL   72 (474)
Q Consensus         3 ~~~~~~~i~~iGigG~G~s~lA~~l~~~G~~V~g~D~~~~~~~-~~--L~~~g--i~i~~g~~~~~i-----~~~d~vV~   72 (474)
T Consensus        45 ~~l~G~~ILDVGC-GgG~--lse~LAr~Ga~VtGID~S~~~I~~Ar~ha~~~~l~i~y~~~-~~e~l~~~~~~~FDvV~~  120 (233)
T PRK05134         45 GGLFGKRVLDVGC-GGGI--LSESMARLGATVTGIDASEENIEVARLHALESGLKIDYRQI-TAEELAAEHPGQFDVVTC  120 (233)
T ss_pred             CCCCCCEEEEECC-CCCH--HHHHHHHCCCEEEEECCCHHHHHHHHHHHHHCCCCCEEEEC-CHHHHHHHCCCCEEEEEE
T ss_conf             4668998999755-8971--12899967997999879989999999985644345116751-476654305786347744


Q ss_pred             CCCCCC-CCHHHHHHHHCCCCEEEHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHC
Q ss_conf             889899-9988999997799499538998864116851587045784047788886403
Q gi|254781096|r   73 STAIDK-DNVECIAARERNIPIIFRSEMLAGLMRCRKSISVSGTHGKTTTTSLIAALLE  130 (474)
Q Consensus        73 spgi~~-~~~~l~~a~~~gi~i~~~~e~l~~~~~~~~~IaVTGTnGKTTTt~ml~~il~  130 (474)
T Consensus       121 ~EVlEHV~d~--~~~----------l~~~~rlLKPG-G~l~lsTiNrt~~S~l~~i~~A  166 (233)
T PRK05134        121 MEMLEHVPDP--ASF----------IRACAKLVKPG-GLVFFSTLNRNLKSYLLAIVGA  166 (233)
T ss_pred             EHHHHHCCCH--HHH----------HHHHHHHHCCC-CEEEEECCCCCHHHHHHHHHHH
T ss_conf             2147753899--999----------99999973899-1499972678989999999999