HHsearch alignment for GI: 254781096 and conserved domain: PRK09260

Probab=94.79  E-value=0.14  Score=29.82  Aligned_cols=72  Identities=26%  Similarity=0.349  Sum_probs=45.1

Q ss_pred             CCEEEEEEECHHHHHHHHHHHHHCCCEEEEEECCCCHHH----------HHHHHCC-----------CEEEECCCH-HHC
Q ss_conf             760799946146087899999987986999607899889----------9999889-----------889967997-886
Q gi|254781096|r    7 MGPIHFVGIGGIGMSGIAEVLHNTGHQVQGSDVILGPNV----------QRLHKQG-----------IKVSIGHKV-ENI   64 (474)
Q Consensus         7 ~~~i~~iGigG~G~s~lA~~l~~~G~~V~g~D~~~~~~~----------~~L~~~g-----------i~i~~g~~~-~~i   64 (474)
T Consensus         2 IkkV~ViGaG~MG~-~IA~~~a~~G~~V~l~D~~~e~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~dl~~a~   80 (289)
T PRK09260          2 MEKIVVVGAGVMGR-GIAYVFASSGFQTTLVDISQEQLASAQQEIESILEDGVALGKVTEAAAQAALARLSYSLDLKEAV   80 (289)
T ss_pred             CCEEEEECCCHHHH-HHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHH
T ss_conf             67699979688789-99999996899889997998999999999999999998717999899999995587668889984


Q ss_pred             CCCCEEEECCCCCCCCH
Q ss_conf             88989998889899998
Q gi|254781096|r   65 DNAEILVLSTAIDKDNV   81 (474)
Q Consensus        65 ~~~d~vV~spgi~~~~~   81 (474)
T Consensus        81 ~~aDlVi--Eav~E~l~   95 (289)
T PRK09260         81 AGADLLI--EAVPEKLE   95 (289)
T ss_pred             CCCCEEE--ECCCCCHH
T ss_conf             7699999--88868632