HHsearch alignment for GI: 254781096 and conserved domain: PRK10416
>PRK10416 cell division protein FtsY; Provisional.
Probab=90.41 E-value=1.3 Score=23.18 Aligned_cols=132 Identities=15% Similarity=0.229 Sum_probs=58.7
Q ss_pred CEEEECCCCCEEEEEE-CCCCCCCCHHHHHHHHCCCC--CCCEEEEECCCCHHHHHHHHHHHHH---HHH-----CCEEE
Q ss_conf 2211014786047630-24455430222333101344--3210333036631478889999999---861-----89999
Q gi|254781096|r 321 RFTLVGVWNDVHVFDD-YGHHPIEISSVLAAVRQICP--RKIIAIHQPHRYSRLSTLFDQFSSC---FGD-----ADIVL 389 (474)
Q Consensus 321 R~e~v~~~~gv~~idD-yahnP~~i~atl~al~~~~~--~rii~i~~p~~~sr~~~~~~e~~~~---l~~-----ad~vi 389 (474)
T Consensus 341 QL~~w~~r~~v~vi~~~~g~Dpa~V--~~dai~~a~~~~~DvviiDTAGRl~~~~~LM~EL~ki~rvi~k~~~~aP~e~l 418 (499)
T PRK10416 341 QLQVWGQRNNIPVIAQHTGADSASV--IFDAIQAAKARNVDVLIADTAGRLQNKSHLMEELKKIVRVMKKLDVEAPHEVM 418 (499)
T ss_pred HHHHHHCCCCCEEEECCCCCCHHHH--HHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEE
T ss_conf 9999842457369836899997999--99999999972999899857764326099999999999999723789997489
Q ss_pred EECCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCHH------HHHHHHHHHCCCCCEEEEECCCC-HHHH----HHH
Q ss_conf 908666776432389999999999963899899988989------99999998558987999944899-8899----999
Q gi|254781096|r 390 ISPVYSAGEKEIPGFSSPELVKNIKLQGHPQAYYMDSFD------HLVSKILAIAEPGDFIIFFGAGN-ITQW----AAS 458 (474)
Q Consensus 390 l~~i~~~~e~~~~g~~~~~l~~~i~~~~~~~~~~~~~~~------eav~~~~~~~~~gDvVL~~GaG~-~~~~----~~~ 458 (474)
T Consensus 419 LV------lDa~tGQna~~qak~F~e~~~ltGiIlTKlDGtAKGG~~lsi~~~~~~---PI~fiG~GE~idDL~~F~~~~ 489 (499)
T PRK10416 419 LT------IDASTGQNAVSQAKLFHEAVGLTGITLTKLDGTAKGGVIFSVADQFGI---PIRYIGVGERIEDLRPFKADD 489 (499)
T ss_pred EE------EECCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHCC---CEEEEECCCCHHHCCCCCHHH
T ss_conf 99------778767789999999844279975999656778852599999999883---959986798822066779899
Q ss_pred HHHHH
Q ss_conf 99998
Q gi|254781096|r 459 LIGEL 463 (474)
Q Consensus 459 ~~~~l 463 (474)
T Consensus 490 Fv~aL 494 (499)
T PRK10416 490 FIEAL 494 (499)
T ss_pred HHHHH
T ss_conf 99998