HHsearch alignment for GI: 254781096 and conserved domain: PRK10773
>PRK10773 murF UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; Reviewed.
Probab=100.00 E-value=0 Score=413.10 Aligned_cols=406 Identities=18% Similarity=0.284 Sum_probs=303.2
Q ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHCCCEEEECCCHHHCCCCCEEEECCCCC-CCCHHHHHHHHCCCCEE-E-H---
Q ss_conf 9999998798699960789988999998898899679978868898999888989-99988999997799499-5-3---
Q gi|254781096|r 23 IAEVLHNTGHQVQGSDVILGPNVQRLHKQGIKVSIGHKVENIDNAEILVLSTAID-KDNVECIAARERNIPII-F-R--- 96 (474)
Q Consensus 23 lA~~l~~~G~~V~g~D~~~~~~~~~L~~~gi~i~~g~~~~~i~~~d~vV~spgi~-~~~~~l~~a~~~gi~i~-~-~--- 96 (474)
T Consensus 6 l~~ia~~~~g~l~~~d~~i---------~~i----~~DSR~v~~g~lFvAl~G~~~DGh~fi~~Ai~~GA~aiv~~~~~~ 72 (452)
T PRK10773 6 LSQLADILNAELQGADITI---------DAV----TTDTRKVTPGCLFVALKGERFDAHDFADQAKAAGAGALLVSRPLD 72 (452)
T ss_pred HHHHHHHHCCEEECCCCCE---------EEE----EECCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCEEEEECCCCC
T ss_conf 9999998699998898157---------789----965871799988999447989979999999986998999847668
Q ss_pred -----------HHHH---HHHHC---CCCCEEEECCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCC---C-CC
Q ss_conf -----------8998---86411---68515870457840477888864034444305753573333310014---6-85
Q gi|254781096|r 97 -----------SEML---AGLMR---CRKSISVSGTHGKTTTTSLIAALLEQGKFDPTVINGGIINSYGTNAR---I-GT 155 (474)
Q Consensus 97 -----------~e~l---~~~~~---~~~~IaVTGTnGKTTTt~ml~~il~~~g~~~~~~~G~~~~~~~~~~~---~-~~ 155 (474)
T Consensus 73 ~~~~~i~V~d~~~al~~la~~~~~~~~~~vIgITGSnGKTTtk~~i~~iL~~~g~~-~~t~gn~n~~iG~p~tl~~~~~~ 151 (452)
T PRK10773 73 IDLPQLIVKDTRLAFGQLAAWVRQQVPARVVALTGSSGKTSVKEMTAAILSQCGNT-LYTAGNLNNDIGVPLTLLRLTPE 151 (452)
T ss_pred CCCCEEEECCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCC-CCCCCCCCCCCCCCHHHHCCCCH
T ss_conf 99998998999999999999875159975899991699625999999999972884-12456526887866076507921
Q ss_pred CCCCHHHCCCCC-CHH----HHCCCCCEEEEEEECCCHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHC
Q ss_conf 420011023221-012----211855303422202201100025566664301333333222222234650134543200
Q gi|254781096|r 156 SEWIVVEADESD-GTF----IRLPSDIVVVTNIDPEHLDYYGDFNAIRAAFYKFIDNIPFYGFAVVCMDHPEVRSLIARI 230 (474)
Q Consensus 156 ~~~~V~E~~e~~-~s~----~~~~P~iaVitNI~~DHld~~~s~e~y~~aK~~i~~~~~~~g~~vin~Dd~~~~~~~~~~ 230 (474)
T Consensus 152 ~~~~v~E~g~~~~gei~~~~~~~~pdiaviTNI~~dHLd~~gs~e~~~~aK~~Lf~~l~~~g~~IlN~Dd~~~~~~~~~~ 231 (452)
T PRK10773 152 YDYAVIELGANHQGEIAWTVSLTRPEAALVNNLAAAHLEGFGSLAGVAKAKGEIFTGLPENGIAIMNADNNDWLNWQSVI 231 (452)
T ss_pred HHHHHHHHCCCCCCHHHHHHCCCCCCEEEEEECCHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHH
T ss_conf 33578532379853567664002667599984247765405769999999999981788798999979876799999983
Q ss_pred CCCCCCCCCCC-CCCCEEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCHHHHHH
Q ss_conf 11123333333-22220221021125842013555113444442000023567654333221121001232100000013
Q gi|254781096|r 231 QNRKIITYGRH-PQADIRYSNIRKYSGRSIFDVSVQGNVTKDLTVIKDLSLPLIGEHNISNACASIAVAYKLGLSSEDVK 309 (474)
Q Consensus 231 ~~~~v~~fg~~-~~~d~~~~~i~~~~~~~~f~~~~~~~~~~~~~~~~~~~l~l~G~Hn~~NalaAia~a~~lgi~~e~i~ 309 (474)
T Consensus 232 ~~~~v~~~~~~~~~~d~~~~~i~~~~~g~~f~l~~~~~~-------~~v~l~l~G~hnv~NalaAiava~~lG~~~~~i~ 304 (452)
T PRK10773 232 GSRKVWRFSPNAANSDFTATNIHVTSHGTEFTLHTPTGS-------VDVLLPLPGRHNIANALAAAALAMSVGATLDAVK 304 (452)
T ss_pred CCCEEEEECCCCCCCCEEEEEEEEECCCCEEEEEECCCE-------EEEEEECCCHHHHHHHHHHHHHHHHCCCCHHHHH
T ss_conf 798289980687776189999999189418999967951-------8999707617689989999999998599999999
Q ss_pred HHHHCCCCCCCCEEEECCCCCEEEEEE-CCCCCCCCHHHHHHHHCCCCCCCEEEEECCCCH-HHHHHHHHHHHHHHH--C
Q ss_conf 343100001582211014786047630-244554302223331013443210333036631-478889999999861--8
Q gi|254781096|r 310 KGLASFSGIKRRFTLVGVWNDVHVFDD-YGHHPIEISSVLAAVRQICPRKIIAIHQPHRYS-RLSTLFDQFSSCFGD--A 385 (474)
Q Consensus 310 ~~L~~f~g~~~R~e~v~~~~gv~~idD-yahnP~~i~atl~al~~~~~~rii~i~~p~~~s-r~~~~~~e~~~~l~~--a 385 (474)
T Consensus 305 ~~L~~~~~v~GRme~i~~~~g~~iIdDsYNAnP~Sm~aal~~l~~~~~~ki~VLGdM~ELG~~s~~~H~~v~~~~~~~~i 384 (452)
T PRK10773 305 AGLANLKAVPGRLFPIQLAENQLLLDDSYNANVGSMTAAVQVLAEMPGYRVLVVGDMAELGAESEACHRQVGEAAKAAGI 384 (452)
T ss_pred HHHHHCCCCCCCEEEEECCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEECCHHHCCCHHHHHHHHHHHHHHHCCC
T ss_conf 99972899867407997387089997425699799999999997577976999877377285789999999999997699
Q ss_pred CEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHCCCCCE--EEEECCCCHHHHHHHHHHHH
Q ss_conf 9999908666776432389999999999963899899988989999999985589879--99944899889999999998
Q gi|254781096|r 386 DIVLISPVYSAGEKEIPGFSSPELVKNIKLQGHPQAYYMDSFDHLVSKILAIAEPGDF--IIFFGAGNITQWAASLIGEL 463 (474)
Q Consensus 386 d~vil~~i~~~~e~~~~g~~~~~l~~~i~~~~~~~~~~~~~~~eav~~~~~~~~~gDv--VL~~GaG~~~~~~~~~~~~l 463 (474)
T Consensus 385 d~v~~v-----------G~~~~~~~~----~~-~~~~~f~~~~~~~~~l~~~l~~~~~~~vLvKGSr~~~l--e~iv~~L 446 (452)
T PRK10773 385 DRVLSV-----------GKLSQAIST----AS-GVGEHFADKTALIARLKALLAEQQVITILVKGSRSAAM--EEVVRAL 446 (452)
T ss_pred CEEEEE-----------CHHHHHHHH----HC-CCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCH--HHHHHHH
T ss_conf 999998-----------878999987----41-87633699999999999887449984899985751149--9999999
Q ss_pred HHCC
Q ss_conf 7417
Q gi|254781096|r 464 ELVT 467 (474)
Q Consensus 464 ~~~~ 467 (474)
T Consensus 447 ~~~~ 450 (452)
T PRK10773 447 QEKG 450 (452)
T ss_pred HHHC
T ss_conf 9625