HHsearch alignment for GI: 254781096 and conserved domain: PRK12771

>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional.
Probab=97.96  E-value=0.00029  Score=48.16  Aligned_cols=99  Identities=18%  Similarity=0.276  Sum_probs=67.0

Q ss_pred             HHHCCEEEEEEECHHHHHHHHHHHHHCCCEEEEEECCC---------------C-----HHHHHHHHCCCEEEECC----
Q ss_conf             31276079994614608789999998798699960789---------------9-----88999998898899679----
Q gi|254781096|r    4 PQGMGPIHFVGIGGIGMSGIAEVLHNTGHQVQGSDVIL---------------G-----PNVQRLHKQGIKVSIGH----   59 (474)
Q Consensus         4 ~~~~~~i~~iGigG~G~s~lA~~l~~~G~~V~g~D~~~---------------~-----~~~~~L~~~gi~i~~g~----   59 (474)
T Consensus       134 ~~tgkkVAVIGaGPAGLsa-A~~La~~G~~VtVfE~~~~~GGml~~GIP~yRLP~~vl~~ei~~i~~~GV~~~~n~~vg~  212 (560)
T PRK12771        134 PDTGKRVAVIGGGPAGLSA-AYQLRRLGHAVTIFEAGPKLGGMMRYGIPGYRLPRDVLDAEIQRILDLGVEVKLGVRVGE  212 (560)
T ss_pred             CCCCCEEEEECCCHHHHHH-HHHHHHCCCEEEEECCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHCCCEEEECCEECC
T ss_conf             7789989998977899999-999997698589967678889888356875447589999999999964967983878446


Q ss_pred             --CHHHC-CCCCEEEECCCCCCCCHHHHHHHHCCCCEEEHHHHHHHHH
Q ss_conf             --97886-8898999888989999889999977994995389988641
Q gi|254781096|r   60 --KVENI-DNAEILVLSTAIDKDNVECIAARERNIPIIFRSEMLAGLM  104 (474)
Q Consensus        60 --~~~~i-~~~d~vV~spgi~~~~~~l~~a~~~gi~i~~~~e~l~~~~  104 (474)
T Consensus       213 dit~~~L~~~yDAV~la~Ga~~~r~l~i~G~d~-~gV~~al~fL~~~~  259 (560)
T PRK12771        213 DITLEQLEGDYDAVFVAIGAQLGKRLPIPGEDA-ANVLDAVSFLRAVE  259 (560)
T ss_pred             CCCHHHHHCCCCEEEECCCCCCCCCCCCCCCCC-CCCEEHHHHHHHHH
T ss_conf             567999717788899916878776089788776-55240599999975