HHsearch alignment for GI: 254781096 and conserved domain: PRK12809
>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed.
Probab=97.77 E-value=0.00058 Score=46.08 Aligned_cols=89 Identities=16% Similarity=0.249 Sum_probs=62.7
Q ss_pred HCCEEEEEEECHHHHHHHHHHHHHCCCEEEEEECCC--------------------CHHHHHHHHCCCEEEECC------
Q ss_conf 276079994614608789999998798699960789--------------------988999998898899679------
Q gi|254781096|r 6 GMGPIHFVGIGGIGMSGIAEVLHNTGHQVQGSDVIL--------------------GPNVQRLHKQGIKVSIGH------ 59 (474)
Q Consensus 6 ~~~~i~~iGigG~G~s~lA~~l~~~G~~V~g~D~~~--------------------~~~~~~L~~~gi~i~~g~------ 59 (474)
T Consensus 309 ~gkKVAVIGsGPAGLaa-A~~Lar~G~~VTVfE~~~~~GGlL~yGIP~fRLPK~vv~rei~~l~~lGV~f~~n~~VGkDi 387 (639)
T PRK12809 309 RSEKVAVIGAGPAGLGC-ADILARAGVQVDVFDRHPEIGGMLTFGIPPFKLDKTVLSQRREIFTAMGIDFHLNCEIGRDI 387 (639)
T ss_pred CCCEEEEECCCHHHHHH-HHHHHHCCCCEEEEECCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEECCEECCCC
T ss_conf 89989998975899999-99999759906999368888986853587452777899999999986498899196779868
Q ss_pred CHHH-CCCCCEEEECCCCCCCCHHHHHHHHCCCC------EEEHHHHHHH
Q ss_conf 9788-68898999888989999889999977994------9953899886
Q gi|254781096|r 60 KVEN-IDNAEILVLSTAIDKDNVECIAARERNIP------IIFRSEMLAG 102 (474)
Q Consensus 60 ~~~~-i~~~d~vV~spgi~~~~~~l~~a~~~gi~------i~~~~e~l~~ 102 (474)
T Consensus 388 t~~eL~~~yDAVflg~Ga~~~~-------~l~IpGedl~GV~~AlefL~~ 430 (639)
T PRK12809 388 TFSDLTSEYDAVFIGVGTYGMM-------RADLPHEDAPGVIQALPFLTA 430 (639)
T ss_pred CHHHHHHHCCEEEEEECCCCCC-------CCCCCCCCCCCCEEHHHHHHH
T ss_conf 8999973179899973678885-------489887778783876999999