HHsearch alignment for GI: 254781096 and conserved domain: TIGR01081

>TIGR01081 mpl UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase; InterPro: IPR005757 The tripeptide L-ananyl-gamma-D-glutamyl-meso-diaminopimelic acid is efficiently re-cycled during the formation of bacterial cell wall murein. UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase is an essential enzyme in this process which links the tripeptide to UDP-N-acetylmuramate.; GO: 0016874 ligase activity, 0007047 cell wall organization and biogenesis.
Probab=100.00  E-value=0  Score=583.57  Aligned_cols=436  Identities=31%  Similarity=0.495  Sum_probs=391.3

Q ss_pred             EEEEEEECHHHHHHHHHHHHHCCCEEEEEECC-CCHHHHHHHHCCCEEEECCCHHHCCC--CCEEEECCCCCCCCHHHHH
Q ss_conf             07999461460878999999879869996078-99889999988988996799788688--9899988898999988999
Q gi|254781096|r    9 PIHFVGIGGIGMSGIAEVLHNTGHQVQGSDVI-LGPNVQRLHKQGIKVSIGHKVENIDN--AEILVLSTAIDKDNVECIA   85 (474)
Q Consensus         9 ~i~~iGigG~G~s~lA~~l~~~G~~V~g~D~~-~~~~~~~L~~~gi~i~~g~~~~~i~~--~d~vV~spgi~~~~~~l~~   85 (474)
T Consensus         1 ~IHIlGIcGTFMGG~A~~A~~~G~~VtGsDa~vYPPMST~LE~~GIe~~~gfD~~QL~~~~pD~~viGNa~~RG~p~VE~   80 (459)
T TIGR01081         1 HIHILGICGTFMGGLAMLAKQLGHEVTGSDANVYPPMSTLLEAQGIEIIEGFDAAQLEPFKPDLVVIGNAMKRGNPCVEA   80 (459)
T ss_pred             CEEEEEECHHHHHHHHHHHHHCCCEECCCCCCCCCCHHHHHHHCCCEEECCCCHHHCCCCCCCEEEECCCCCCCCHHHHH
T ss_conf             95899725132789999998749557013565588656888755730322778444003488879984633167446789


Q ss_pred             HHHCCCCEEEHHHHHH-HHHCCCCCEEEECCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCC---------
Q ss_conf             9977994995389988-641168515870457840477888864034444305753573333310014685---------
Q gi|254781096|r   86 ARERNIPIIFRSEMLA-GLMRCRKSISVSGTHGKTTTTSLIAALLEQGKFDPTVINGGIINSYGTNARIGT---------  155 (474)
Q Consensus        86 a~~~gi~i~~~~e~l~-~~~~~~~~IaVTGTnGKTTTt~ml~~il~~~g~~~~~~~G~~~~~~~~~~~~~~---------  155 (474)
T Consensus        81 vL~~nl~Y~SGPQWL~d~~L~drWVlaV~GTHGKTTT~~M~~WvLE~~G~~pGFliGGv~gNFgvSArLg~~pr~dp~~~  160 (459)
T TIGR01081        81 VLEKNLPYTSGPQWLHDFVLRDRWVLAVAGTHGKTTTASMLAWVLEQCGLKPGFLIGGVPGNFGVSARLGETPRQDPNSQ  160 (459)
T ss_pred             HHHCCCCCCCCCCHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCEECCCCCCCCEEEECCCCCCCCCCCC
T ss_conf             87268950217510563342134278950788604688999999986379887267342453421420687756674546


Q ss_pred             CCCCHHHCCCCCCHH-------HHCCCCCEEEEEEECCCHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf             420011023221012-------2118553034222022011000255666643013333332222222346501345432
Q gi|254781096|r  156 SEWIVVEADESDGTF-------IRLPSDIVVVTNIDPEHLDYYGDFNAIRAAFYKFIDNIPFYGFAVVCMDHPEVRSLIA  228 (474)
Q Consensus       156 ~~~~V~E~~e~~~s~-------~~~~P~iaVitNI~~DHld~~~s~e~y~~aK~~i~~~~~~~g~~vin~Dd~~~~~~~~  228 (474)
T Consensus       161 S~fFviEADEYD~AFFDKRSKFVHY~PRTlvlNNleFDHADIFddL~AI~~QFHhlvR~vP~~G~i~~~~~~~~l~~~l~  240 (459)
T TIGR01081       161 SPFFVIEADEYDTAFFDKRSKFVHYRPRTLVLNNLEFDHADIFDDLKAIQRQFHHLVRTVPGEGLILAPERDQSLKDTLA  240 (459)
T ss_pred             CCEEEEECCCCCCCCCCCCCCEEECCCCEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEECCCCEEECCCHHHHHHHHHH
T ss_conf             87579953565651002543312027600145155544455787689987403068896468864843501468999986


Q ss_pred             HCCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCHHHHH
Q ss_conf             00111233333332222022102112584201355511344444200002356765433322112100123210000001
Q gi|254781096|r  229 RIQNRKIITYGRHPQADIRYSNIRKYSGRSIFDVSVQGNVTKDLTVIKDLSLPLIGEHNISNACASIAVAYKLGLSSEDV  308 (474)
Q Consensus       229 ~~~~~~v~~fg~~~~~d~~~~~i~~~~~~~~f~~~~~~~~~~~~~~~~~~~l~l~G~Hn~~NalaAia~a~~lgi~~e~i  308 (474)
T Consensus       241 ~GCWs~~e~~G~--~~~W~A~~--~~~D~S~f~Vll~G~~------vg~VkW~lvG~HN~~NaL~aIAAArHvGV~~~~A  310 (459)
T TIGR01081       241 KGCWSEQEFLGE--QGEWQAEK--ITADASEFEVLLDGEK------VGEVKWSLVGEHNMHNALMAIAAARHVGVAIEDA  310 (459)
T ss_pred             HCCCCCHHCCCC--CCCHHHHH--HCCCCHHHHHHHCCCE------EEEEEEEECCCCCHHHHHHHHHHHHCCCCCHHHH
T ss_conf             068720112467--77505765--4045100022017843------6776533304600135899998742167687899


Q ss_pred             HHHHHCCCCCCCCEEEECCCCCEEEEEECCCCCCCCHHHHHHHHCCCC--CCCEEEEECCCCH-HHHHHHHHHHHHHHHC
Q ss_conf             334310000158221101478604763024455430222333101344--3210333036631-4788899999998618
Q gi|254781096|r  309 KKGLASFSGIKRRFTLVGVWNDVHVFDDYGHHPIEISSVLAAVRQICP--RKIIAIHQPHRYS-RLSTLFDQFSSCFGDA  385 (474)
Q Consensus       309 ~~~L~~f~g~~~R~e~v~~~~gv~~idDyahnP~~i~atl~al~~~~~--~rii~i~~p~~~s-r~~~~~~e~~~~l~~a  385 (474)
T Consensus       311 c~ALG~F~N~kRRlE~kG~~Ng~TVYDDFAHHP~AI~~Tl~~LR~kVGG~~rIlAVLEPRSnTMKlG~~K~~la~sL~~A  390 (459)
T TIGR01081       311 CEALGSFVNAKRRLELKGEANGVTVYDDFAHHPTAIEATLAALRDKVGGGARILAVLEPRSNTMKLGVHKDDLAPSLGRA  390 (459)
T ss_pred             HHHHCCCCCCCEEEEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHC
T ss_conf             98703200120015672113137873276678689999999987523997069998778744100343255666766600


Q ss_pred             CEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHH
Q ss_conf             9999908666776432389999999999963899899988989999999985589879999448998899999999987
Q gi|254781096|r  386 DIVLISPVYSAGEKEIPGFSSPELVKNIKLQGHPQAYYMDSFDHLVSKILAIAEPGDFIIFFGAGNITQWAASLIGELE  464 (474)
Q Consensus       386 d~vil~~i~~~~e~~~~g~~~~~l~~~i~~~~~~~~~~~~~~~eav~~~~~~~~~gDvVL~~GaG~~~~~~~~~~~~l~  464 (474)
T Consensus       391 D~Vf~~~p--~~----~~W~V~e~~~~~----~~p~~~~~~~D~~v~~ivk~A~~gD~ILVMSNGgFgGIH~KlL~~L~  459 (459)
T TIGR01081       391 DEVFLLQP--EQ----IPWEVAEVAEQC----VQPANVSADLDELVAMIVKEAQPGDHILVMSNGGFGGIHGKLLDALK  459 (459)
T ss_pred             CEEEEECC--CC----CCHHHHHHHHHC----CCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHCC
T ss_conf             35653168--98----870599999860----24021101078999999960588875899746886406899998529