HHsearch alignment for GI: 254781096 and conserved domain: TIGR01081
>TIGR01081 mpl UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase; InterPro: IPR005757 The tripeptide L-ananyl-gamma-D-glutamyl-meso-diaminopimelic acid is efficiently re-cycled during the formation of bacterial cell wall murein. UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase is an essential enzyme in this process which links the tripeptide to UDP-N-acetylmuramate.; GO: 0016874 ligase activity, 0007047 cell wall organization and biogenesis.
Probab=100.00 E-value=0 Score=583.57 Aligned_cols=436 Identities=31% Similarity=0.495 Sum_probs=391.3
Q ss_pred EEEEEEECHHHHHHHHHHHHHCCCEEEEEECC-CCHHHHHHHHCCCEEEECCCHHHCCC--CCEEEECCCCCCCCHHHHH
Q ss_conf 07999461460878999999879869996078-99889999988988996799788688--9899988898999988999
Q gi|254781096|r 9 PIHFVGIGGIGMSGIAEVLHNTGHQVQGSDVI-LGPNVQRLHKQGIKVSIGHKVENIDN--AEILVLSTAIDKDNVECIA 85 (474)
Q Consensus 9 ~i~~iGigG~G~s~lA~~l~~~G~~V~g~D~~-~~~~~~~L~~~gi~i~~g~~~~~i~~--~d~vV~spgi~~~~~~l~~ 85 (474)
T Consensus 1 ~IHIlGIcGTFMGG~A~~A~~~G~~VtGsDa~vYPPMST~LE~~GIe~~~gfD~~QL~~~~pD~~viGNa~~RG~p~VE~ 80 (459)
T TIGR01081 1 HIHILGICGTFMGGLAMLAKQLGHEVTGSDANVYPPMSTLLEAQGIEIIEGFDAAQLEPFKPDLVVIGNAMKRGNPCVEA 80 (459)
T ss_pred CEEEEEECHHHHHHHHHHHHHCCCEECCCCCCCCCCHHHHHHHCCCEEECCCCHHHCCCCCCCEEEECCCCCCCCHHHHH
T ss_conf 95899725132789999998749557013565588656888755730322778444003488879984633167446789
Q ss_pred HHHCCCCEEEHHHHHH-HHHCCCCCEEEECCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCC---------
Q ss_conf 9977994995389988-641168515870457840477888864034444305753573333310014685---------
Q gi|254781096|r 86 ARERNIPIIFRSEMLA-GLMRCRKSISVSGTHGKTTTTSLIAALLEQGKFDPTVINGGIINSYGTNARIGT--------- 155 (474)
Q Consensus 86 a~~~gi~i~~~~e~l~-~~~~~~~~IaVTGTnGKTTTt~ml~~il~~~g~~~~~~~G~~~~~~~~~~~~~~--------- 155 (474)
T Consensus 81 vL~~nl~Y~SGPQWL~d~~L~drWVlaV~GTHGKTTT~~M~~WvLE~~G~~pGFliGGv~gNFgvSArLg~~pr~dp~~~ 160 (459)
T TIGR01081 81 VLEKNLPYTSGPQWLHDFVLRDRWVLAVAGTHGKTTTASMLAWVLEQCGLKPGFLIGGVPGNFGVSARLGETPRQDPNSQ 160 (459)
T ss_pred HHHCCCCCCCCCCHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCEECCCCCCCCEEEECCCCCCCCCCCC
T ss_conf 87268950217510563342134278950788604688999999986379887267342453421420687756674546
Q ss_pred CCCCHHHCCCCCCHH-------HHCCCCCEEEEEEECCCHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf 420011023221012-------2118553034222022011000255666643013333332222222346501345432
Q gi|254781096|r 156 SEWIVVEADESDGTF-------IRLPSDIVVVTNIDPEHLDYYGDFNAIRAAFYKFIDNIPFYGFAVVCMDHPEVRSLIA 228 (474)
Q Consensus 156 ~~~~V~E~~e~~~s~-------~~~~P~iaVitNI~~DHld~~~s~e~y~~aK~~i~~~~~~~g~~vin~Dd~~~~~~~~ 228 (474)
T Consensus 161 S~fFviEADEYD~AFFDKRSKFVHY~PRTlvlNNleFDHADIFddL~AI~~QFHhlvR~vP~~G~i~~~~~~~~l~~~l~ 240 (459)
T TIGR01081 161 SPFFVIEADEYDTAFFDKRSKFVHYRPRTLVLNNLEFDHADIFDDLKAIQRQFHHLVRTVPGEGLILAPERDQSLKDTLA 240 (459)
T ss_pred CCEEEEECCCCCCCCCCCCCCEEECCCCEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEECCCCEEECCCHHHHHHHHHH
T ss_conf 87579953565651002543312027600145155544455787689987403068896468864843501468999986
Q ss_pred HCCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCHHHHH
Q ss_conf 00111233333332222022102112584201355511344444200002356765433322112100123210000001
Q gi|254781096|r 229 RIQNRKIITYGRHPQADIRYSNIRKYSGRSIFDVSVQGNVTKDLTVIKDLSLPLIGEHNISNACASIAVAYKLGLSSEDV 308 (474)
Q Consensus 229 ~~~~~~v~~fg~~~~~d~~~~~i~~~~~~~~f~~~~~~~~~~~~~~~~~~~l~l~G~Hn~~NalaAia~a~~lgi~~e~i 308 (474)
T Consensus 241 ~GCWs~~e~~G~--~~~W~A~~--~~~D~S~f~Vll~G~~------vg~VkW~lvG~HN~~NaL~aIAAArHvGV~~~~A 310 (459)
T TIGR01081 241 KGCWSEQEFLGE--QGEWQAEK--ITADASEFEVLLDGEK------VGEVKWSLVGEHNMHNALMAIAAARHVGVAIEDA 310 (459)
T ss_pred HCCCCCHHCCCC--CCCHHHHH--HCCCCHHHHHHHCCCE------EEEEEEEECCCCCHHHHHHHHHHHHCCCCCHHHH
T ss_conf 068720112467--77505765--4045100022017843------6776533304600135899998742167687899
Q ss_pred HHHHHCCCCCCCCEEEECCCCCEEEEEECCCCCCCCHHHHHHHHCCCC--CCCEEEEECCCCH-HHHHHHHHHHHHHHHC
Q ss_conf 334310000158221101478604763024455430222333101344--3210333036631-4788899999998618
Q gi|254781096|r 309 KKGLASFSGIKRRFTLVGVWNDVHVFDDYGHHPIEISSVLAAVRQICP--RKIIAIHQPHRYS-RLSTLFDQFSSCFGDA 385 (474)
Q Consensus 309 ~~~L~~f~g~~~R~e~v~~~~gv~~idDyahnP~~i~atl~al~~~~~--~rii~i~~p~~~s-r~~~~~~e~~~~l~~a 385 (474)
T Consensus 311 c~ALG~F~N~kRRlE~kG~~Ng~TVYDDFAHHP~AI~~Tl~~LR~kVGG~~rIlAVLEPRSnTMKlG~~K~~la~sL~~A 390 (459)
T TIGR01081 311 CEALGSFVNAKRRLELKGEANGVTVYDDFAHHPTAIEATLAALRDKVGGGARILAVLEPRSNTMKLGVHKDDLAPSLGRA 390 (459)
T ss_pred HHHHCCCCCCCEEEEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHC
T ss_conf 98703200120015672113137873276678689999999987523997069998778744100343255666766600
Q ss_pred CEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHH
Q ss_conf 9999908666776432389999999999963899899988989999999985589879999448998899999999987
Q gi|254781096|r 386 DIVLISPVYSAGEKEIPGFSSPELVKNIKLQGHPQAYYMDSFDHLVSKILAIAEPGDFIIFFGAGNITQWAASLIGELE 464 (474)
Q Consensus 386 d~vil~~i~~~~e~~~~g~~~~~l~~~i~~~~~~~~~~~~~~~eav~~~~~~~~~gDvVL~~GaG~~~~~~~~~~~~l~ 464 (474)
T Consensus 391 D~Vf~~~p--~~----~~W~V~e~~~~~----~~p~~~~~~~D~~v~~ivk~A~~gD~ILVMSNGgFgGIH~KlL~~L~ 459 (459)
T TIGR01081 391 DEVFLLQP--EQ----IPWEVAEVAEQC----VQPANVSADLDELVAMIVKEAQPGDHILVMSNGGFGGIHGKLLDALK 459 (459)
T ss_pred CEEEEECC--CC----CCHHHHHHHHHC----CCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHCC
T ss_conf 35653168--98----870599999860----24021101078999999960588875899746886406899998529