HHsearch alignment for GI: 254781096 and conserved domain: TIGR01316
>TIGR01316 gltA glutamate synthase (NADPH), homotetrameric; InterPro: IPR006004 One pathway for the assimilation of ammonia and glutamate biosynthesis involves homotetrameric glutamate synthase (1.4.1.13 from EC) which transfers the amide group of glutamine to 2-oxoglutarate to yield two molecules of glutamate . 2 L-glutamate + NADP^+ = L-glutamine + 2-oxoglutarate + NADPH + H^+. .
Probab=96.08 E-value=0.026 Score=34.83 Aligned_cols=72 Identities=22% Similarity=0.386 Sum_probs=47.4
Q ss_pred CHHHCCEEEEEEECHHHHHHHHHHHHHCCCEEEEEECCC--------------------CHHHHHHHHCCCEEEECCC--
Q ss_conf 531276079994614608789999998798699960789--------------------9889999988988996799--
Q gi|254781096|r 3 NPQGMGPIHFVGIGGIGMSGIAEVLHNTGHQVQGSDVIL--------------------GPNVQRLHKQGIKVSIGHK-- 60 (474)
Q Consensus 3 ~~~~~~~i~~iGigG~G~s~lA~~l~~~G~~V~g~D~~~--------------------~~~~~~L~~~gi~i~~g~~-- 60 (474)
T Consensus 138 ~p~t~~kVAViGaGPAGL~-cA~elAk~Gh~VtvfEALhKPGGV~~YGIPefRLpKei~~~E~k~LkklGv~fr~~~lvG 216 (462)
T TIGR01316 138 APSTKKKVAVIGAGPAGLA-CASELAKKGHEVTVFEALHKPGGVLAYGIPEFRLPKEIVETEVKKLKKLGVKFRTDYLVG 216 (462)
T ss_pred CCCCCCEEEEECCCCHHHH-HHHHHHHCCCEEEEEEECCCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCEEEEECCEEC
T ss_conf 7888877999846821468-899997479869999714899856753688854875788988887632663799443750
Q ss_pred -----HHHCCCC--CEEEECCC
Q ss_conf -----7886889--89998889
Q gi|254781096|r 61 -----VENIDNA--EILVLSTA 75 (474)
Q Consensus 61 -----~~~i~~~--d~vV~spg 75 (474)
T Consensus 217 kt~TL~eL~~~YGfDAVFIgtG 238 (462)
T TIGR01316 217 KTVTLEELLEKYGFDAVFIGTG 238 (462)
T ss_pred CCHHHHHHHHHCCCCEEEEEEC
T ss_conf 5112888887519707999506