HHsearch alignment for GI: 254781096 and conserved domain: cd05005

>cd05005 SIS_PHI Hexulose-6-phosphate isomerase (PHI). PHI is a member of the SIS (Sugar ISomerase domain) superfamily. In the ribulose monophosphate pathway of formaldehyde fixation, hexulose-6-phosphate synthase catalyzes the condensation of ribulose-5-phosphate with formadelhyde to become hexulose-6-phosphate, which is then isomerized to fructose-6-phosphate by PHI.
Probab=93.76  E-value=0.47  Score=26.22  Aligned_cols=68  Identities=16%  Similarity=0.202  Sum_probs=35.8

Q ss_pred             HCCEEEEEEECHHHHHH--HHHHHHHCCCEEEEE-ECCCCHHHHHHHHCCCEEEECCCHHHCCCCCEEEECCCCCCC---
Q ss_conf             27607999461460878--999999879869996-078998899999889889967997886889899988898999---
Q gi|254781096|r    6 GMGPIHFVGIGGIGMSG--IAEVLHNTGHQVQGS-DVILGPNVQRLHKQGIKVSIGHKVENIDNAEILVLSTAIDKD---   79 (474)
Q Consensus         6 ~~~~i~~iGigG~G~s~--lA~~l~~~G~~V~g~-D~~~~~~~~~L~~~gi~i~~g~~~~~i~~~d~vV~spgi~~~---   79 (474)
T Consensus        32 ~a~~I~~~G~G~Sg~va~~~a~rl~~lG~~~~~~~d~~--------------------~~~i~~~Dv~I~iS~SG~T~~~   91 (179)
T cd05005          32 NAKRIFVYGAGRSGLVAKAFAMRLMHLGLNVYVVGETT--------------------TPAIGPGDLLIAISGSGETSSV   91 (179)
T ss_pred             CCCCEEEEEECCHHHHHHHHHHHHHHCCCCEEEECCCC--------------------CCCCCCCCEEEEECCCCCCHHH
T ss_conf             49948999856258779999999973598012435655--------------------5779999999998199995689


Q ss_pred             CHHHHHHHHCCCCE
Q ss_conf             98899999779949
Q gi|254781096|r   80 NVECIAARERNIPI   93 (474)
Q Consensus        80 ~~~l~~a~~~gi~i   93 (474)
T Consensus        92 ~~~~~~aK~~ga~i  105 (179)
T cd05005          92 VNAAEKAKKAGAKV  105 (179)
T ss_pred             HHHHHHHHHCCCEE
T ss_conf             99999999879919