HHsearch alignment for GI: 254781096 and conserved domain: cd05005
>cd05005 SIS_PHI Hexulose-6-phosphate isomerase (PHI). PHI is a member of the SIS (Sugar ISomerase domain) superfamily. In the ribulose monophosphate pathway of formaldehyde fixation, hexulose-6-phosphate synthase catalyzes the condensation of ribulose-5-phosphate with formadelhyde to become hexulose-6-phosphate, which is then isomerized to fructose-6-phosphate by PHI.
Probab=93.76 E-value=0.47 Score=26.22 Aligned_cols=68 Identities=16% Similarity=0.202 Sum_probs=35.8
Q ss_pred HCCEEEEEEECHHHHHH--HHHHHHHCCCEEEEE-ECCCCHHHHHHHHCCCEEEECCCHHHCCCCCEEEECCCCCCC---
Q ss_conf 27607999461460878--999999879869996-078998899999889889967997886889899988898999---
Q gi|254781096|r 6 GMGPIHFVGIGGIGMSG--IAEVLHNTGHQVQGS-DVILGPNVQRLHKQGIKVSIGHKVENIDNAEILVLSTAIDKD--- 79 (474)
Q Consensus 6 ~~~~i~~iGigG~G~s~--lA~~l~~~G~~V~g~-D~~~~~~~~~L~~~gi~i~~g~~~~~i~~~d~vV~spgi~~~--- 79 (474)
T Consensus 32 ~a~~I~~~G~G~Sg~va~~~a~rl~~lG~~~~~~~d~~--------------------~~~i~~~Dv~I~iS~SG~T~~~ 91 (179)
T cd05005 32 NAKRIFVYGAGRSGLVAKAFAMRLMHLGLNVYVVGETT--------------------TPAIGPGDLLIAISGSGETSSV 91 (179)
T ss_pred CCCCEEEEEECCHHHHHHHHHHHHHHCCCCEEEECCCC--------------------CCCCCCCCEEEEECCCCCCHHH
T ss_conf 49948999856258779999999973598012435655--------------------5779999999998199995689
Q ss_pred CHHHHHHHHCCCCE
Q ss_conf 98899999779949
Q gi|254781096|r 80 NVECIAARERNIPI 93 (474)
Q Consensus 80 ~~~l~~a~~~gi~i 93 (474)
T Consensus 92 ~~~~~~aK~~ga~i 105 (179)
T cd05005 92 VNAAEKAKKAGAKV 105 (179)
T ss_pred HHHHHHHHHCCCEE
T ss_conf 99999999879919